Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0803 Cannabis sativa HOM05D004935 ORTHO05D005676 2.6e-108 395.6 224 100.0
Hma1.2p1_0034F.1_g021280 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 6.6e-64 248.1 216 68.5
MD09G1265200 Malus domestica HOM05D004935 ORTHO05D005676 6.6e-64 248.1 227 66.5
RcHm_v2.0_Chr3g0492651 Rosa chinensis HOM05D004935 ORTHO05D005676 1.6e-62 243.4 221 65.2
Thecc.04G001700 Theobroma cacao HOM05D004935 ORTHO05D005676 6.2e-62 241.5 224 63.4
Actinidia01601 Actinidia chinensis HOM05D004935 ORTHO05D005676 1.5e-60 236.9 219 67.1
FvH4_1g28640 Fragaria vesca HOM05D004935 ORTHO05D005676 2.0e-60 236.5 205 65.9
CiPaw.03G075500 Carya illinoinensis HOM05D004935 ORTHO05D005676 3.4e-60 235.7 213 65.7
CSS0027542 Camellia sinensis var. sinensis HOM05D004935 ORTHO05D005676 4.4e-60 235.3 225 64.0
Rhsim10G0182800 Rhododendron simsii HOM05D004935 ORTHO05D005676 4.4e-60 235.3 219 64.8
Duzib133G0236 Durio zibethinus HOM05D004935 ORTHO05D005676 7.6e-60 234.6 224 62.1
FAN28G0886 Fragaria x ananassa HOM05D004935 ORTHO05D005676 7.6e-60 234.6 222 63.1
Duzib138G1863 Durio zibethinus HOM05D004935 ORTHO05D005676 1.7e-59 233.4 202 65.8
vmacro20490 Vaccinium macrocarpon HOM05D004935 ORTHO05D005676 1.7e-59 233.4 214 66.4
Prupe.3G163400 Prunus persica HOM05D004935 ORTHO05D005676 2.2e-59 233.0 203 68.5
QL02p059972 Quercus lobata HOM05D004935 ORTHO05D005676 8.4e-59 231.1 194 69.6
MD17G1261400 Malus domestica HOM05D004935 ORTHO05D005676 1.1e-58 230.7 223 63.2
Manes.02G079800 Manihot esculenta HOM05D004935 ORTHO05D005676 1.4e-58 230.3 201 67.2
Potri.004G082300 Populus trichocarpa HOM05D004935 ORTHO05D005676 3.2e-58 229.2 189 69.8
FAN26G0615 Fragaria x ananassa HOM05D004935 ORTHO05D005676 4.1e-58 228.8 240 59.2
Lj4A255T23 Lonicera japonica HOM05D004935 ORTHO05D005676 4.1e-58 228.8 212 65.6
CiPaw.04G048500 Carya illinoinensis HOM05D004935 ORTHO05D005676 7.1e-58 228.0 216 65.3
Actinidia17180 Actinidia chinensis HOM05D004935 ORTHO05D005676 9.2e-58 227.6 219 64.4
Ciclev10029179m.g Citrus clementina HOM05D004935 ORTHO05D005676 4.6e-57 225.3 201 65.2
COL.COLO4_19777 Corchorus olitorius HOM05D004935 ORTHO05D005676 7.8e-57 224.6 231 62.3
Manes.01G121800 Manihot esculenta HOM05D004935 ORTHO05D005676 7.8e-57 224.6 213 64.3
Aqoxy3G04045 Aquilegia oxysepala HOM05D004935 ORTHO05D005676 1.3e-56 223.8 201 64.7
TPR.G12527 Trifolium pratense HOM05D004935 ORTHO05D005676 1.3e-56 223.8 220 60.9
Gohir.A07G073800 Gossypium hirsutum HOM05D004935 ORTHO05D005676 3.9e-56 222.2 224 58.9
Nitab4.5_0001088g0190 Nicotiana tabacum HOM05D004935 ORTHO05D005676 3.9e-56 222.2 221 62.4
Lj6g0018793 Lotus japonicus HOM05D004935 ORTHO05D005676 6.6e-56 221.5 199 64.8
Medtr5g091900 Medicago truncatula HOM05D004935 ORTHO05D005676 1.1e-55 220.7 189 66.7
Nitab4.5_0002465g0010 Nicotiana tabacum HOM05D004935 ORTHO05D005676 1.1e-55 220.7 221 61.5
Glyma.11G213800 Glycine max HOM05D004935 ORTHO05D005676 1.9e-55 219.9 219 61.6
Sabra04G0054800 Salix brachista HOM05D004935 ORTHO05D005676 2.5e-55 219.5 198 65.7
Migut.K01110 Erythranthe guttata HOM05D004935 ORTHO05D005676 4.3e-55 218.8 221 57.5
Dinv28224 Davidia involucrata HOM05D004935 ORTHO05D005676 1.6e-54 216.9 201 65.2
Eucgr.J01625 Eucalyptus grandis HOM05D004935 ORTHO05D005676 2.1e-54 216.5 204 62.7
TWI53G1040 Tripterygium wilfordii HOM05D004935 ORTHO05D005676 2.8e-54 216.1 201 63.7
Gohir.A11G169300 Gossypium hirsutum HOM05D004935 ORTHO05D005676 4.7e-54 215.3 213 60.6
Glyma.18G042900 Glycine max HOM05D004935 ORTHO05D005676 6.2e-54 214.9 191 66.0
Nn4g24526 Nelumbo nucifera HOM05D004935 ORTHO05D005676 6.2e-54 214.9 214 59.8
Peaxi162Scf00078g00178 Petunia axillaris HOM05D004935 ORTHO05D005676 6.2e-54 214.9 222 58.6
Ca_06292_v3 Cicer arietinum L. HOM05D004935 ORTHO05D005676 8.1e-54 214.5 221 59.7
Dinv19063 Davidia involucrata HOM05D004935 ORTHO05D005676 8.1e-54 214.5 178 70.2
Lalb_Chr10g0104161 Lupinus albus HOM05D004935 ORTHO05D005676 3.1e-53 212.6 194 65.5
Gohir.D07G078500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 4.0e-53 212.2 224 56.2
PGSC0003DMG400013258 Solanum tuberosum HOM05D004935 ORTHO05D005676 5.2e-53 211.8 202 62.4
arahy.Tifrunner.gnm1.ann1.5XP26J Arachis hypogaea HOM05D004935 ORTHO05D005676 2.0e-52 209.9 229 54.6
Gorai.007G188100 Gossypium raimondii HOM05D004935 ORTHO05D005676 2.0e-52 209.9 213 59.6
MSTRG.3688 Avicennia marina HOM05D004935 ORTHO05D005676 4.4e-52 208.8 214 58.4
Cfa007772 Carpinus fangiana HOM05D004935 ORTHO05D005676 5.8e-52 208.4 297 48.5
Oeu032311.1 Olea europaea HOM05D004935 ORTHO05D005676 5.8e-52 208.4 209 60.8
Hma1.2p1_0158F.1_g069850 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 7.6e-52 208.0 219 58.4
Gohir.D11G175500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 9.9e-52 207.6 213 59.2
Gorai.001G082900 Gossypium raimondii HOM05D004935 ORTHO05D005676 1.3e-51 207.2 226 55.8
Sopen11g006600 Solanum pennellii HOM05D004935 ORTHO05D005676 3.8e-51 205.7 189 65.6
Solyc11g011760.3 Solanum lycopersicum HOM05D004935 ORTHO05D005676 4.9e-51 205.3 200 62.0
PSO407G0171 Papaver somniferum HOM05D004935 ORTHO05D005676 8.4e-51 204.5 205 59.5
Atru.chr1.1949 Acer truncatum HOM05D004935 ORTHO05D005676 1.4e-50 203.8 164 69.5
Phvul.001G228000 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 1.9e-50 203.4 198 61.6
PSO170G5471 Papaver somniferum HOM05D004935 ORTHO05D005676 2.4e-50 203.0 199 59.8
VMungo1383G0526 Vigna mungo HOM05D004935 ORTHO05D005676 2.4e-50 203.0 197 61.4
Lj2A514G44 Lonicera japonica HOM05D004935 ORTHO05D005676 4.2e-50 202.2 245 52.2
THA.LOC104820912 Tarenaya hassleriana HOM05D004935 ORTHO05D005676 5.4e-50 201.8 216 57.4
Cc07_g13020 Coffea canephora HOM05D004935 ORTHO05D005676 9.3e-50 201.1 190 63.7
MBI13_g35399_MAGBIO Magnolia biondii HOM05D004935 ORTHO05D005676 1.2e-49 200.7 211 57.3
Oeu029081.1 Olea europaea HOM05D004935 ORTHO05D005676 1.2e-49 200.7 220 57.3
TAR622G0462 Trochodendron aralioides HOM05D004935 ORTHO05D005676 2.1e-49 199.9 222 56.8
Lalb_Chr18g0053611 Lupinus albus HOM05D004935 ORTHO05D005676 2.7e-49 199.5 203 56.2
Actinidia28792 Actinidia chinensis HOM05D004935 ORTHO05D005676 4.6e-49 198.7 220 56.4
PGR042G3611 Punica granatum HOM05D004935 ORTHO05D005676 7.8e-49 198.0 205 57.6
SGA_v2.0_scaffold45G17134 Striga asiatica HOM05D004935 ORTHO05D005676 1.0e-48 197.6 253 48.2
arahy.Tifrunner.gnm1.ann1.8KIW52 Arachis hypogaea HOM05D004935 ORTHO05D005676 2.3e-48 196.4 207 58.0
CsaV3_5G024270 Cucumis sativus L. HOM05D004935 ORTHO05D005676 3.0e-48 196.1 201 56.2
ClCG01G008740 Citrullus lanatus HOM05D004935 ORTHO05D005676 8.7e-48 194.5 192 57.8
SalBow3G4475 Salvia bowleyana HOM05D004935 ORTHO05D005676 1.5e-47 193.7 175 63.4
Psat2g014520 Pisum sativum HOM05D004935 ORTHO05D005676 1.9e-47 193.4 198 61.1
unitig_748.g8451 Utricularia gibba HOM05D004935 ORTHO05D005676 2.5e-47 193.0 191 59.7
Zm00001eb179280 Zea mays HOM05D004935 ORTHO05D005676 2.5e-47 193.0 195 56.4
MELO3C025122.2 Cucumis melo HOM05D004935 ORTHO05D005676 8.1e-46 188.0 192 56.8
Lalb_Chr17g0345951 Lupinus albus HOM05D004935 ORTHO05D005676 8.1e-46 188.0 205 56.1
Hund13074 Selenicereus undatus HOM05D004935 ORTHO05D005676 1.8e-45 186.8 197 54.8
arahy.Tifrunner.gnm1.ann1.63R0A2 Arachis hypogaea HOM05D004935 ORTHO05D005676 3.1e-45 186.0 207 57.0
TPR.G9990 Trifolium pratense HOM05D004935 ORTHO05D005676 5.3e-45 185.3 213 55.4
AT5G16550 Arabidopsis thaliana HOM05D004935 ORTHO05D005676 1.3e-43 180.6 213 52.6
Psat2g044600 Pisum sativum HOM05D004935 ORTHO05D005676 1.3e-43 180.6 209 55.0
HPP92_017642 Vanilla planifolia HOM05D004935 ORTHO05D005676 1.3e-43 180.6 194 57.2
LjContig00141g0002036 Lotus japonicus HOM05D004935 ORTHO05D005676 1.4e-42 177.2 209 52.2
Medtr5g077280 Medicago truncatula HOM05D004935 ORTHO05D005676 1.4e-42 177.2 213 54.0
Zm00001eb041900 Zea mays HOM05D004935 ORTHO05D005676 2.4e-42 176.4 194 51.5
arahy.Tifrunner.gnm1.ann1.PKWW5Q Arachis hypogaea HOM05D004935 ORTHO05D005676 9.3e-42 174.5 176 61.4
AL6G27510 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 1.6e-41 173.7 212 51.9
BcaC03g18499 Brassica carinata HOM05D004935 ORTHO05D005676 1.6e-41 173.7 190 54.7
A02p03620 Brassica napus HOM05D004935 ORTHO05D005676 2.1e-41 173.3 183 56.8
CDE11G1189 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 2.1e-41 173.3 207 50.7
Sc11g0004790 Simmondsia chinensis HOM05D004935 ORTHO05D005676 4.6e-41 172.2 222 52.3
Carub.0006s1475 Capsella rubella HOM05D004935 ORTHO05D005676 7.9e-41 171.4 206 52.4
A10p22660 Brassica napus HOM05D004935 ORTHO05D005676 1.7e-40 170.2 203 52.7
BraA10t44327Z Brassica rapa HOM05D004935 ORTHO05D005676 1.7e-40 170.2 203 52.7
BcaB08g36840 Brassica carinata HOM05D004935 ORTHO05D005676 3.0e-40 169.5 206 52.9
BolC3t13402H Brassica oleracea HOM05D004935 ORTHO05D005676 3.9e-40 169.1 219 48.9
TAR629G3076 Trochodendron aralioides HOM05D004935 ORTHO05D005676 8.7e-40 167.9 217 54.8
BcaC04g18869 Brassica carinata HOM05D004935 ORTHO05D005676 1.1e-39 167.5 213 50.7
C09p60610 Brassica napus HOM05D004935 ORTHO05D005676 1.5e-39 167.2 211 50.2
BolC9t58894H Brassica oleracea HOM05D004935 ORTHO05D005676 1.9e-39 166.8 213 50.7
CDE05G2820 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 3.3e-39 166.0 218 48.2
C03p09070 Brassica napus HOM05D004935 ORTHO05D005676 5.6e-39 165.2 214 48.6
BraA02t05331Z Brassica rapa HOM05D004935 ORTHO05D005676 1.3e-38 164.1 183 54.6
BcaB01g04976 Brassica carinata HOM05D004935 ORTHO05D005676 2.1e-38 163.3 186 53.8
Glyma.02G242200 Glycine max HOM05D004935 ORTHO05D005676 1.8e-37 160.2 221 49.3
Phvul.008G238800 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 2.4e-37 159.8 208 51.4
BcaC03g18497 Brassica carinata HOM05D004935 ORTHO05D005676 3.4e-36 156.0 200 50.5
C02p08410 Brassica napus HOM05D004935 ORTHO05D005676 3.4e-36 156.0 200 50.5
BolC2t06759H Brassica oleracea HOM05D004935 ORTHO05D005676 3.4e-36 156.0 200 50.5
VMungo0647G1435 Vigna mungo HOM05D004935 ORTHO05D005676 9.9e-36 154.5 208 50.0
Sp6g27610 Schrenkiella parvula HOM05D004935 ORTHO05D005676 1.9e-34 150.2 204 50.5
Aa31LG11G13100 Aethionema arabicum HOM05D004935 ORTHO05D005676 3.2e-34 149.4 189 53.4
Lsat_1_v5_gn_8_111520 Lactuca sativa HOM05D004935 ORTHO05D005676 1.2e-33 147.5 177 53.1
Thhalv10014473m.g Eutrema salsugineum HOM05D004935 ORTHO05D005676 6.0e-33 145.2 194 51.5
Haze_14300 Corylus avellana HOM05D004935 ORTHO05D005676 2.5e-31 139.8 286 40.2
GSVIVG01026318001 Vitis vinifera HOM05D004935 ORTHO05D005676 3.7e-30 136.0 103 80.6
A03p07850 Brassica napus HOM05D004935 ORTHO05D005676 4.0e-29 132.5 196 48.0
Sc11g0004530 Simmondsia chinensis HOM05D004935 ORTHO05D005676 4.5e-28 129.0 222 45.0
BraA03t10111Z Brassica rapa HOM05D000423 ORTHO05D005676 1.7e-27 127.1 205 45.4
Oeu014715.1 Olea europaea HOM05D004935 ORTHO05D005676 2.5e-26 123.2 122 58.2
Sed0000771 Sechium edule HOM05D004935 ORTHO05D005676 7.1e-26 121.7 201 40.8
EL10Ac2g03209 Beta vulgaris HOM05D004935 ORTHO05D005676 2.1e-25 120.2 165 49.7
HanXRQChr15g0489811 Helianthus annuus HOM05D004935 ORTHO05D005676 7.9e-25 118.2 179 46.9
DCAR_003418 Daucus carota HOM05D004935 ORTHO05D005676 9.6e-23 111.3 116 57.8
ECA246G1322 Erigeron canadensis HOM05D004935 ORTHO05D005676 4.8e-22 109.0 141 48.9
Peaxi162Scf00085g00527 Petunia axillaris HOM05D004935 ORTHO05D005676 1.4e-21 107.5 90 66.7
AL3G36180 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 4.5e-20 102.4 125 52.8
Mapoly0035s0070 Marchantia polymorpha HOM05D004935 ORTHO05D005676 5.0e-19 99.0 206 34.5
Zm00001eb099130 Zea mays HOM05D004935 ORTHO05D005676 1.1e-18 97.8 137 47.4
AL92U10070 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 1.4e-18 97.4 117 53.8
AagrBONN_evm.TU.Sc2ySwM_117.2252 Anthoceros agrestis HOM05D004935 ORTHO05D005676 4.2e-18 95.9 144 43.1
FAN19G0113 Fragaria x ananassa HOM05D004935 ORTHO05D005676 9.3e-18 94.7 87 55.2
AL6G14310 Arabidopsis lyrata HOM05D000097 ORTHO05D005676 1.6e-14 84.0 118 50.8
MSTRG.15645 Avicennia marina HOM05D004935 ORTHO05D005676 1.6e-14 84.0 91 49.5
Medtr5g077270 Medicago truncatula HOM05D007893 ORTHO05D010042 2.8e-14 83.2 81 64.2
CARHR196690 Cardamine hirsuta HOM05D004935 ORTHO05D005676 1.4e-13 80.9 87 50.6
Pp3c25_6290 Physcomitrium patens HOM05D004935 ORTHO05D005676 1.8e-13 80.5 148 37.2
DCAR_003417 Daucus carota HOM05D004935 ORTHO05D005676 2.9e-11 73.2 71 54.9
Cpa.g.sc178.1 Carica papaya HOM05D004935 ORTHO05D005676 6.5e-11 72.0 93 47.3
CARHR196680 Cardamine hirsuta HOM05D004935 ORTHO05D005676 8.5e-11 71.6 83 54.2
Pp3c6_9570 Physcomitrium patens HOM05D004935 ORTHO05D005676 1.1e-10 71.2 221 27.6
SEGI_39153 Sequoiadendron giganteum HOM05D004935 ORTHO05D005676 1.2e-09 67.8 114 43.9
EL10Ac2g03210 Beta vulgaris HOM05D004935 ORTHO05D005676 3.6e-09 66.2 53 62.3
CSS0034638 Camellia sinensis var. sinensis HOM05D004935 ORTHO05D005676 1.4e-08 64.3 45 68.9


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