Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 1.4e-215 752.7 374 100.0
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 2.6e-150 535.8 312 82.1
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 8.5e-149 530.8 308 80.8
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 2.5e-148 529.3 379 71.0
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 1.6e-147 526.6 334 78.1
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.6e-147 526.6 382 70.7
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.6e-147 526.6 382 70.7
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.6e-147 526.6 380 70.8
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 2.1e-147 526.2 291 84.9
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 2.1e-147 526.2 313 81.2
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 3.6e-147 525.4 313 79.2
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 8.0e-147 524.2 380 69.5
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 2.3e-146 522.7 317 77.6
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 3.0e-146 522.3 382 69.6
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 2.0e-145 519.6 309 80.6
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 3.3e-145 518.8 340 74.4
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 5.7e-145 518.1 334 77.2
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 5.7e-145 518.1 311 80.1
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 5.7e-145 518.1 340 74.1
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 5.7e-145 518.1 384 68.2
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 5.7e-145 518.1 344 73.8
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 9.7e-145 517.3 291 84.2
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 1.3e-144 516.9 331 76.1
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 2.8e-144 515.8 308 80.2
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 3.7e-144 515.4 317 76.3
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 6.3e-144 514.6 308 79.5
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 8.2e-144 514.2 357 72.3
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 8.2e-144 514.2 382 67.8
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 1.1e-143 513.8 297 82.8
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 1.1e-143 513.8 364 70.1
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 1.8e-143 513.1 304 78.6
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 2.4e-143 512.7 338 73.1
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 3.1e-143 512.3 340 75.6
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 3.1e-143 512.3 376 68.4
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 3.1e-143 512.3 297 81.1
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 4.1e-143 511.9 306 79.4
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 5.3e-143 511.5 313 79.2
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 5.3e-143 511.5 377 69.0
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 5.3e-143 511.5 294 82.0
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 5.3e-143 511.5 386 66.8
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 7.0e-143 511.1 329 74.8
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 7.0e-143 511.1 371 69.8
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 1.6e-142 510.0 306 79.1
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 2.0e-142 509.6 291 82.5
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 2.0e-142 509.6 376 69.4
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 2.0e-142 509.6 333 71.8
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 2.7e-142 509.2 369 71.5
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 3.5e-142 508.8 304 78.3
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 2.2e-141 506.1 375 67.7
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 2.2e-141 506.1 373 67.8
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 2.2e-141 506.1 374 67.4
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 3.8e-141 505.4 312 78.8
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 3.8e-141 505.4 385 68.1
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 5.0e-141 505.0 309 78.3
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 8.5e-141 504.2 337 72.4
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 8.5e-141 504.2 371 67.4
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 2.5e-140 502.7 379 69.4
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 9.4e-140 500.7 377 69.2
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 1.2e-139 500.4 303 78.5
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 1.6e-139 500.0 302 80.1
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 2.1e-139 499.6 360 68.9
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 2.7e-139 499.2 297 80.1
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 2.7e-139 499.2 341 70.4
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 2.7e-139 499.2 341 70.4
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 8.0e-139 497.7 357 69.2
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 1.0e-138 497.3 299 76.9
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 1.0e-138 497.3 302 79.8
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 1.4e-138 496.9 299 76.9
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 1.8e-138 496.5 299 76.9
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 1.8e-138 496.5 368 67.7
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 2.3e-138 496.1 372 67.7
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 4.0e-138 495.4 340 71.8
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 6.8e-138 494.6 291 78.7
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 6.8e-138 494.6 376 66.5
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 1.2e-137 493.8 373 66.0
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 1.2e-137 493.8 308 77.9
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 1.5e-137 493.4 366 66.9
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 2.6e-137 492.7 298 76.2
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 2.6e-137 492.7 294 78.2
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 3.4e-137 492.3 428 62.4
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 5.7e-137 491.5 298 76.2
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 9.8e-137 490.7 298 76.5
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 3.7e-136 488.8 377 65.5
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 1.1e-135 487.3 369 66.1
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 3.1e-135 485.7 318 73.9
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 9.1e-135 484.2 303 73.6
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 1.2e-134 483.8 338 70.1
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 3.5e-134 482.3 303 74.3
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 7.7e-134 481.1 301 75.4
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 1.0e-133 480.7 345 69.0
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 1.0e-133 480.7 346 67.9
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 1.1e-132 477.2 398 63.8
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 5.4e-127 458.4 286 75.5
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 7.8e-126 454.5 354 65.0
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 8.6e-125 451.1 324 69.8
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 1.1e-124 450.7 369 62.1
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 3.3e-124 449.1 299 68.9
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 2.1e-123 446.4 367 61.6
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 3.6e-123 445.7 291 71.1
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 8.9e-122 441.0 302 69.5
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 4.4e-121 438.7 319 66.5
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 1.3e-120 437.2 298 72.1
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 1.9e-116 423.3 303 64.7
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 7.3e-116 421.4 229 86.5
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 2.8e-115 419.5 291 66.3
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 1.9e-108 396.7 379 56.7
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 1.3e-93 347.4 313 60.4
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 6.6e-93 345.1 182 85.7
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 2.5e-92 343.2 334 52.7
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 5.6e-84 315.5 261 64.0
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 1.4e-82 310.8 266 62.4
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 4.5e-81 305.8 215 65.1
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 5.8e-81 305.4 219 68.5
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 1.6e-78 297.4 204 71.6
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 3.9e-77 292.7 205 70.2
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 9.0e-74 281.6 294 52.7
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 1.6e-46 191.0 242 45.9
Lj3C357T11 Lonicera japonica HOM05D006606 ORTHO05D008429 5.5e-23 112.8 137 47.4
Lj3C376T8 Lonicera japonica HOM05D006606 ORTHO05D008429 1.2e-22 111.7 138 47.8
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 3.6e-22 110.2 94 59.6
Thhalv10029367m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 3.3e-15 87.0 63 63.5
PSO017G3682 Papaver somniferum HOM05D006606 ORTHO05D008429 1.2e-09 68.6 36 77.8


User provided reference genes

Program Settings