Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 3.2e-256 887.9 433 100.0
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 2.6e-189 665.6 428 75.0
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 5.9e-186 654.4 435 73.8
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 1.4e-182 643.3 433 72.3
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 2.2e-180 636.0 426 72.5
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 4.8e-180 634.8 425 70.8
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 8.6e-177 624.0 425 70.1
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 7.2e-176 620.9 419 70.4
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 9.5e-176 620.5 431 69.4
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 1.6e-175 619.8 433 67.7
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 6.1e-175 617.8 384 77.9
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 1.4e-174 616.7 433 69.3
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 4.0e-174 615.1 421 68.6
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 2.6e-173 612.5 435 65.7
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 2.2e-172 609.4 426 68.8
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 6.3e-172 607.8 431 67.7
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 8.3e-172 607.4 427 69.3
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 8.3e-172 607.4 430 68.4
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 1.0e-169 600.5 434 65.0
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 3.9e-169 598.6 432 65.7
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 1.9e-168 596.3 434 67.5
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 3.3e-168 595.5 435 66.4
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 3.3e-168 595.5 431 65.9
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 1.2e-167 593.6 432 66.4
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 1.2e-167 593.6 424 67.2
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 1.6e-167 593.2 433 66.7
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 1.0e-166 590.5 422 67.1
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 2.3e-166 589.3 436 67.0
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 3.1e-166 589.0 441 65.3
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 5.2e-166 588.2 422 64.2
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 6.8e-166 587.8 422 66.4
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 2.0e-165 586.3 422 64.0
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 2.6e-165 585.9 431 68.0
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 9.8e-165 583.9 434 66.6
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 2.2e-164 582.8 426 66.0
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 2.9e-164 582.4 419 66.8
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 1.4e-163 580.1 426 65.7
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 1.2e-162 577.0 400 68.2
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 1.3e-161 573.5 423 66.2
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 1.3e-161 573.5 423 66.2
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 1.3e-161 573.5 433 66.7
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 1.1e-160 570.5 390 70.8
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 1.5e-160 570.1 442 65.4
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 4.3e-160 568.5 426 64.8
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 4.7e-159 565.1 429 66.2
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 4.7e-159 565.1 429 66.2
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 1.8e-158 563.1 426 63.8
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 2.3e-158 562.8 420 65.5
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 4.0e-158 562.0 435 63.4
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 6.8e-158 561.2 435 63.4
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 2.6e-157 559.3 435 63.2
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 2.9e-156 555.8 420 63.1
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 2.9e-156 555.8 422 64.5
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 1.1e-155 553.9 432 63.2
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 1.4e-155 553.5 429 63.2
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 2.1e-154 549.7 427 63.7
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 6.0e-154 548.1 425 61.6
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 1.7e-153 546.6 419 61.3
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.5e-152 543.5 435 61.6
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 4.3e-152 542.0 391 67.5
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 4.0e-150 535.4 427 62.3
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 8.9e-150 534.3 435 60.5
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.2e-149 533.9 435 60.7
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 4.4e-149 531.9 436 61.5
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 7.1e-147 524.6 405 62.2
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 7.1e-147 524.6 434 60.1
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 1.6e-146 523.5 530 52.8
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 6.0e-146 521.5 424 60.1
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 6.2e-143 511.5 429 59.7
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 6.8e-142 508.1 362 66.9
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 2.1e-138 496.5 358 66.2
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 4.6e-138 495.4 429 58.3
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 3.6e-135 485.7 415 60.0
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 4.8e-135 485.3 432 56.5
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 1.5e-133 480.3 427 54.8
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 1.5e-133 480.3 432 55.8
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 1.3e-132 477.2 420 56.9
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 3.8e-132 475.7 415 58.8
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 6.4e-132 474.9 378 61.4
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 9.3e-131 471.1 362 62.4
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 1.3e-129 467.2 430 57.9
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 6.6e-129 464.9 411 58.9
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 6.6e-129 464.9 415 57.3
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 6.6e-129 464.9 415 57.3
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 1.1e-128 464.2 368 60.6
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 2.8e-127 459.5 414 56.8
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 2.8e-127 459.5 414 56.8
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 3.6e-127 459.1 411 57.7
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 1.4e-126 457.2 415 57.6
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 2.0e-125 453.4 651 40.9
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 1.3e-121 440.7 438 51.8
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 3.9e-121 439.1 305 69.2
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 1.3e-119 434.1 303 69.3
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 5.5e-115 418.7 410 50.0
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 3.9e-113 412.5 425 49.6
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 4.7e-90 335.9 292 59.6
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 4.8e-79 299.3 479 37.0
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 4.2e-75 286.2 460 37.6
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 2.6e-72 276.9 236 60.2
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 9.1e-70 268.5 272 51.5
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 1.5e-59 234.6 213 53.1
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 2.5e-59 233.8 191 61.3
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 1.5e-56 224.6 214 53.7
unitig_748.g8297 Utricularia gibba HOM05D006857 ORTHO05D008679 6.2e-50 202.6 187 53.5
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 2.9e-47 193.7 178 52.2
MBI10_g35434_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 6.0e-45 186.0 146 61.0
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 6.2e-42 176.0 123 69.9
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 1.1e-41 175.3 113 72.6
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 1.4e-38 164.9 253 39.5
TPR.G25294 Trifolium pratense HOM05D006857 ORTHO05D008679 5.2e-33 146.4 110 65.5
SHI00775 Sapria himalayana HOM05D000105 ORTHO05D000023 1.4e-17 95.1 79 51.9
SEGI_21065 Sequoiadendron giganteum HOM05D006857 ORTHO05D008679 5.8e-16 89.7 98 45.9
MD13G1221100 Malus domestica HOM05D006857 ORTHO05D008679 3.8e-15 87.0 125 44.8
MBI10_g35432_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 2.1e-13 81.3 73 57.5
MCO09G143 Micromonas commoda HOM05D006857 ORTHO05D008679 7.3e-11 72.8 218 25.2
HanXRQChr11g0332551 Helianthus annuus HOM05D006857 ORTHO05D008679 1.1e-09 68.9 50 66.0
MCO07G483 Micromonas commoda HOM05D006857 ORTHO05D008679 3.4e-08 63.9 240 27.5
ATR0787G039 Amborella trichopoda HOM05D006857 ORTHO05D008679 1.7e-07 61.6 54 57.4


User provided reference genes

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