Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0644 Cannabis sativa HOM05D007103 ORTHO05D008948 3.9e-222 774.6 434 100.0
Haze_01571 Corylus avellana HOM05D007103 ORTHO05D008948 3.5e-170 602.1 452 73.7
Cfa015108 Carpinus fangiana HOM05D007103 ORTHO05D008948 6.0e-170 601.3 455 73.0
QL03p041867 Quercus lobata HOM05D007103 ORTHO05D008948 9.5e-168 594.0 457 77.0
TAR371G1171 Trochodendron aralioides HOM05D007103 ORTHO05D008948 1.5e-165 586.6 457 73.1
Dinv06214 Davidia involucrata HOM05D007103 ORTHO05D008948 1.3e-164 583.6 451 72.3
GSVIVG01010248001 Vitis vinifera HOM05D007103 ORTHO05D008948 3.2e-163 578.9 459 69.9
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 5.6e-160 568.2 457 67.4
Prupe.1G342500 Prunus persica HOM05D007103 ORTHO05D008948 1.2e-159 567.0 466 67.0
Manes.10G065901 Manihot esculenta HOM05D007103 ORTHO05D008948 2.8e-159 565.8 454 68.3
PGR044G1063 Punica granatum HOM05D007103 ORTHO05D008948 1.6e-154 550.1 455 66.8
MELO3C005211.2 Cucumis melo HOM05D007103 ORTHO05D008948 4.6e-154 548.5 456 67.3
Sed0022925 Sechium edule HOM05D007103 ORTHO05D008948 1.0e-153 547.4 456 67.1
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 2.5e-152 542.7 444 69.8
CsaV3_5G017430 Cucumis sativus L. HOM05D007103 ORTHO05D008948 4.7e-151 538.5 456 65.8
Eucgr.B02623 Eucalyptus grandis HOM05D007103 ORTHO05D008948 1.4e-150 537.0 457 70.0
Thecc.02G296200 Theobroma cacao HOM05D007103 ORTHO05D008948 2.0e-149 533.1 463 67.0
COL.COLO4_27515 Corchorus olitorius HOM05D007103 ORTHO05D008948 1.9e-147 526.6 444 63.7
Nn3g18722 Nelumbo nucifera HOM05D007103 ORTHO05D008948 2.4e-147 526.2 429 68.8
Gohir.D01G137900 Gossypium hirsutum HOM05D007103 ORTHO05D008948 3.2e-147 525.8 459 67.3
Gorai.002G168100 Gossypium raimondii HOM05D007103 ORTHO05D008948 7.1e-147 524.6 459 67.3
Lj3A854G74 Lonicera japonica HOM05D007103 ORTHO05D008948 9.2e-147 524.2 479 62.4
RcHm_v2.0_Chr4g0446051 Rosa chinensis HOM05D007103 ORTHO05D008948 3.5e-146 522.3 471 65.4
Gohir.A01G145152 Gossypium hirsutum HOM05D007103 ORTHO05D008948 2.5e-144 516.2 459 66.0
arahy.Tifrunner.gnm1.ann1.CDY64E Arachis hypogaea HOM05D007103 ORTHO05D008948 3.3e-144 515.8 450 64.0
arahy.Tifrunner.gnm1.ann1.U7H2Z0 Arachis hypogaea HOM05D007103 ORTHO05D008948 3.3e-144 515.8 450 64.0
Glyma.05G135400 Glycine max HOM05D007103 ORTHO05D008948 4.3e-144 515.4 457 63.7
Ciclev10005118m.g Citrus clementina HOM05D007103 ORTHO05D008948 4.8e-143 511.9 395 75.9
Sabra08G0108900 Salix brachista HOM05D007103 ORTHO05D008948 2.4e-142 509.6 443 62.1
THA.LOC104805941 Tarenaya hassleriana HOM05D007103 ORTHO05D008948 5.3e-142 508.4 458 64.8
HanXRQChr14g0446891 Helianthus annuus HOM05D007103 ORTHO05D008948 2.2e-140 503.1 452 62.4
CiPaw.05G161900 Carya illinoinensis HOM05D007103 ORTHO05D008948 1.9e-139 500.0 315 80.0
MD13G1010500 Malus domestica HOM05D007103 ORTHO05D008948 3.2e-139 499.2 475 62.1
Rhsim04G0168800 Rhododendron simsii HOM05D007103 ORTHO05D008948 3.2e-139 499.2 521 56.4
ATR0618G149 Amborella trichopoda HOM05D007103 ORTHO05D008948 7.1e-139 498.0 457 62.8
Ca_18212_v3 Cicer arietinum L. HOM05D007103 ORTHO05D008948 1.2e-138 497.3 453 62.7
Potri.008G143700 Populus trichocarpa HOM05D007103 ORTHO05D008948 5.1e-137 491.9 418 63.6
MBI06_g12320_MAGBIO Magnolia biondii HOM05D007103 ORTHO05D008948 2.5e-136 489.6 315 77.5
Lalb_Chr13g0293061 Lupinus albus HOM05D007103 ORTHO05D008948 2.8e-135 486.1 455 62.2
CDE08G0078 Ceratophyllum demersum HOM05D007103 ORTHO05D008948 1.4e-134 483.8 452 58.6
Lj4g0001083 Lotus japonicus HOM05D007103 ORTHO05D008948 1.2e-133 480.7 457 60.2
Psat7g086680 Pisum sativum HOM05D007103 ORTHO05D008948 4.5e-133 478.8 451 61.0
MSTRG.2093 Avicennia marina HOM05D007103 ORTHO05D008948 7.6e-133 478.0 462 58.9
Glyma.08G090600 Glycine max HOM05D007103 ORTHO05D008948 2.4e-131 473.0 368 68.2
PSO478G2004 Papaver somniferum HOM05D007103 ORTHO05D008948 7.1e-131 471.5 461 59.2
Solyc04g008560.3 Solanum lycopersicum HOM05D007103 ORTHO05D008948 2.1e-130 469.9 460 61.5
Sopen04g003720 Solanum pennellii HOM05D007103 ORTHO05D008948 3.5e-130 469.2 460 61.5
Nitab4.5_0000129g0430 Nicotiana tabacum HOM05D007103 ORTHO05D008948 1.0e-129 467.6 460 63.3
PGSC0003DMG400031375 Solanum tuberosum HOM05D007103 ORTHO05D008948 1.3e-129 467.2 460 61.1
HPP92_022082 Vanilla planifolia HOM05D007103 ORTHO05D008948 1.8e-129 466.8 457 58.6
Peaxi162Scf00329g00938 Petunia axillaris HOM05D007103 ORTHO05D008948 2.3e-129 466.5 458 61.8
Nitab4.5_0007973g0020 Nicotiana tabacum HOM05D007103 ORTHO05D008948 2.1e-127 459.9 456 61.6
Aqoxy3G00022 Aquilegia oxysepala HOM05D007103 ORTHO05D008948 3.7e-127 459.1 471 58.4
DCAR_030327 Daucus carota HOM05D007103 ORTHO05D008948 3.7e-127 459.1 460 58.9
FAN17G1256 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.8e-126 456.8 478 59.2
Sp2g13560 Schrenkiella parvula HOM05D007103 ORTHO05D008948 3.1e-126 456.1 465 59.1
SGA_v2.0_scaffold127G33990 Striga asiatica HOM05D007103 ORTHO05D008948 3.1e-126 456.1 446 58.7
FAN07G2615 Fragaria x ananassa HOM05D007103 ORTHO05D008948 6.9e-126 454.9 477 58.9
ClCG01G007020 Citrullus lanatus HOM05D007103 ORTHO05D008948 3.4e-125 452.6 318 69.8
FAN12G1264 Fragaria x ananassa HOM05D007103 ORTHO05D008948 3.4e-125 452.6 477 58.9
BcaC04g21529 Brassica carinata HOM05D007103 ORTHO05D008948 1.0e-124 451.1 458 60.7
Migut.E00576 Erythranthe guttata HOM05D007103 ORTHO05D008948 1.3e-124 450.7 486 54.9
Carub.0005s0121 Capsella rubella HOM05D007103 ORTHO05D008948 3.8e-124 449.1 461 56.6
CAN.G458.2 Capsicum annuum HOM05D007103 ORTHO05D008948 4.9e-124 448.7 396 62.4
AL5G11410 Arabidopsis lyrata HOM05D007103 ORTHO05D008948 8.4e-124 448.0 463 58.5
C09p30690 Brassica napus HOM05D007103 ORTHO05D008948 2.5e-123 446.4 458 59.8
unitig_8.g4025 Utricularia gibba HOM05D007103 ORTHO05D008948 2.5e-123 446.4 457 55.4
Aa31LG2G7810 Aethionema arabicum HOM05D007103 ORTHO05D008948 2.7e-122 443.0 457 57.5
BraA09t37988Z Brassica rapa HOM05D007103 ORTHO05D008948 3.5e-122 442.6 459 59.3
BolC9t55934H Brassica oleracea HOM05D007103 ORTHO05D008948 7.9e-122 441.4 462 58.7
A09p23820 Brassica napus HOM05D007103 ORTHO05D008948 3.9e-121 439.1 462 58.0
BcaB07g30707 Brassica carinata HOM05D007103 ORTHO05D008948 1.1e-120 437.6 454 58.1
Lsat_1_v5_gn_3_27560 Lactuca sativa HOM05D007103 ORTHO05D008948 7.4e-120 434.9 447 63.1
Phvul.002G186800 Phaseolus vulgaris HOM05D007103 ORTHO05D008948 8.2e-119 431.4 436 57.1
TPR.G34765 Trifolium pratense HOM05D007103 ORTHO05D008948 1.1e-118 431.0 457 60.2
vmacro08589 Vaccinium macrocarpon HOM05D007103 ORTHO05D008948 2.0e-117 426.8 326 69.6
Sc03g0005470 Simmondsia chinensis HOM05D007103 ORTHO05D008948 7.6e-117 424.9 450 53.8
ECA246G2851 Erigeron canadensis HOM05D007103 ORTHO05D008948 2.2e-116 423.3 439 55.4
Actinidia32355 Actinidia chinensis HOM05D007103 ORTHO05D008948 8.4e-116 421.4 295 72.2
Thhalv10004194m.g Eutrema salsugineum HOM05D007103 ORTHO05D008948 3.2e-115 419.5 469 58.6
AT2G02148 Arabidopsis thaliana HOM05D007103 ORTHO05D008948 7.1e-115 418.3 459 56.9
AUR62003469 Chenopodium quinoa HOM05D007103 ORTHO05D008948 1.2e-114 417.5 417 55.2
Ciclev10010767m.g Citrus clementina HOM05D007103 ORTHO05D008948 1.2e-114 417.5 251 82.1
CARHR144820 Cardamine hirsuta HOM05D007103 ORTHO05D008948 1.6e-114 417.2 464 58.2
EL10Ac6g15409 Beta vulgaris HOM05D007103 ORTHO05D008948 6.1e-106 388.7 517 45.8
PSO017G4620 Papaver somniferum HOM05D007103 ORTHO05D008948 5.1e-105 385.6 359 59.3
AUR62017776 Chenopodium quinoa HOM05D007103 ORTHO05D008948 8.2e-103 378.3 408 52.2
FvH4_4g36300 Fragaria vesca HOM05D007103 ORTHO05D008948 4.1e-102 375.9 333 61.3
VMungo0251G2627 Vigna mungo HOM05D007103 ORTHO05D008948 5.9e-101 372.1 378 56.1
FAN22G0934 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.8e-97 360.5 327 59.6
Zm00001eb228800 Zea mays HOM05D007103 ORTHO05D008948 4.4e-96 355.9 390 50.0
BcaB07g30709 Brassica carinata HOM05D007103 ORTHO05D008948 1.7e-92 344.0 419 50.1
SalBow2G1702 Salvia bowleyana HOM05D007103 ORTHO05D008948 1.8e-89 334.0 280 64.6
Mapoly0001s0015 Marchantia polymorpha HOM05D007103 ORTHO05D008948 1.3e-87 327.8 481 45.9
Atru.chr11.1054 Acer truncatum HOM05D007103 ORTHO05D008948 2.2e-87 327.0 424 50.5
SMO358G0481 Selaginella moellendorffii HOM05D007103 ORTHO05D008948 2.1e-82 310.5 445 41.6
SEGI_34932 Sequoiadendron giganteum HOM05D007103 ORTHO05D008948 2.3e-81 307.0 245 61.6
Pp3c6_26300 Physcomitrium patens HOM05D007103 ORTHO05D008948 1.5e-80 304.3 468 44.2
Pp3c5_2140 Physcomitrium patens HOM05D007103 ORTHO05D008948 4.4e-80 302.8 470 44.5
Actinidia25204 Actinidia chinensis HOM05D007103 ORTHO05D008948 7.2e-67 258.8 155 80.0
Cpa.g.sc2.105 Carica papaya HOM05D007103 ORTHO05D008948 1.4e-62 244.6 221 61.1
CBR_g70721 Chara braunii HOM05D007103 ORTHO05D008948 1.9e-59 234.2 349 40.1
AagrBONN_evm.TU.Sc2ySwM_368.3256 Anthoceros agrestis HOM05D007103 ORTHO05D008948 4.3e-59 233.0 209 55.0
Actinidia31381 Actinidia chinensis HOM05D007103 ORTHO05D008948 2.3e-57 227.3 388 49.2
Medtr5g010860 Medicago truncatula HOM05D007103 ORTHO05D008948 5.2e-49 199.5 153 68.6
Pp3c6_29570 Physcomitrium patens HOM05D007103 ORTHO05D008948 4.9e-39 166.4 184 46.7
Hund18263 Selenicereus undatus HOM05D007103 ORTHO05D008948 1.6e-18 98.2 176 39.8
Lsat_1_v5_gn_3_133181 Lactuca sativa HOM05D003297 ORTHO05D004027 1.9e-14 84.7 160 47.5
Aa31LG1G6410 Aethionema arabicum HOM05D007103 ORTHO05D008948 1.6e-13 81.6 106 46.2
Ciclev10006333m.g Citrus clementina HOM05D007103 ORTHO05D008948 1.0e-12 79.0 69 65.2
Medtr6g043130 Medicago truncatula HOM05D007103 ORTHO05D008948 2.5e-11 74.3 42 81.0
Cpa.g.sc2.103 Carica papaya HOM05D007103 ORTHO05D008948 4.8e-10 70.1 48 64.6


User provided reference genes

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