Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0569 Cannabis sativa HOM05D007350 ORTHO05D009323 2.2e-79 298.9 152 100.0
Prupe.8G169100 Prunus persica HOM05D007350 ORTHO05D009323 1.8e-33 146.4 165 52.7
RcHm_v2.0_Chr6g0278921 Rosa chinensis HOM05D007350 ORTHO05D009323 1.9e-30 136.3 160 51.9
FvH4_2g15660 Fragaria vesca HOM05D007350 ORTHO05D009323 9.4e-30 134.0 160 52.5
FAN24G2045 Fragaria x ananassa HOM05D007350 ORTHO05D009323 3.6e-29 132.1 160 51.9
FAN27G1653 Fragaria x ananassa HOM05D007350 ORTHO05D009323 8.0e-29 131.0 169 47.3
FAN15G0854 Fragaria x ananassa HOM05D007350 ORTHO05D009323 1.0e-28 130.6 160 51.9
RcHm_v2.0_Chr6g0278901 Rosa chinensis HOM05D007350 ORTHO05D009323 1.8e-28 129.8 161 50.9
Ciclev10029452m.g Citrus clementina HOM05D007350 ORTHO05D009323 8.8e-28 127.5 161 47.8
Manes.04G071000 Manihot esculenta HOM05D007350 ORTHO05D009323 1.5e-27 126.7 154 51.9
TWI79G1045 Tripterygium wilfordii HOM05D007350 ORTHO05D009323 1.5e-27 126.7 165 47.9
ClCG02G003950 Citrullus lanatus HOM05D007350 ORTHO05D009323 2.0e-27 126.3 114 60.5
Cpa.g.sc20.115 Carica papaya HOM05D007350 ORTHO05D009323 5.7e-27 124.8 166 48.2
Haze_02104 Corylus avellana HOM05D007350 ORTHO05D009323 5.7e-27 124.8 170 45.3
Thecc.02G055300 Theobroma cacao HOM05D007350 ORTHO05D009323 7.5e-27 124.4 159 50.3
Glyma.13G070400 Glycine max HOM05D007350 ORTHO05D009323 9.8e-27 124.0 155 46.5
Potri.004G177800 Populus trichocarpa HOM05D007350 ORTHO05D009323 1.3e-26 123.6 113 61.9
Glyma.19G012500 Glycine max HOM05D007350 ORTHO05D009323 2.2e-26 122.9 118 55.9
MD10G1127900 Malus domestica HOM05D007350 ORTHO05D009323 6.3e-26 121.3 113 59.3
VMungo0464G1538 Vigna mungo HOM05D007350 ORTHO05D009323 6.3e-26 121.3 159 45.3
Sabra04G0119700 Salix brachista HOM05D007350 ORTHO05D009323 8.3e-26 120.9 105 63.8
CsaV3_7G001160 Cucumis sativus L. HOM05D007350 ORTHO05D009323 1.8e-25 119.8 115 58.3
Duzib052G1005 Durio zibethinus HOM05D007350 ORTHO05D009323 1.8e-25 119.8 88 70.5
GSVIVG01023973001 Vitis vinifera HOM05D007350 ORTHO05D009323 2.4e-25 119.4 149 51.0
Gohir.A03G205900 Gossypium hirsutum HOM05D007350 ORTHO05D009323 4.1e-25 118.6 160 48.1
arahy.Tifrunner.gnm1.ann1.7M0RFB Arachis hypogaea HOM05D007350 ORTHO05D009323 5.4e-25 118.2 84 72.6
Nn4g24553 Nelumbo nucifera HOM05D007350 ORTHO05D009323 7.0e-25 117.9 129 51.2
Gohir.D02G227300 Gossypium hirsutum HOM05D007350 ORTHO05D009323 9.1e-25 117.5 162 46.3
Gorai.005G255200 Gossypium raimondii HOM05D007350 ORTHO05D009323 9.1e-25 117.5 160 48.1
MBI19_g01918_MAGBIO Magnolia biondii HOM05D007350 ORTHO05D009323 1.2e-24 117.1 153 51.6
TPR.G2262 Trifolium pratense HOM05D007350 ORTHO05D009323 1.6e-24 116.7 163 46.0
Aqoxy3G04007 Aquilegia oxysepala HOM05D007350 ORTHO05D009323 2.0e-24 116.3 138 53.6
QL11p052353 Quercus lobata HOM05D007350 ORTHO05D009323 2.7e-24 115.9 166 45.2
MELO3C013337.2 Cucumis melo HOM05D007350 ORTHO05D009323 3.5e-24 115.5 94 69.1
Hma1.2p1_0032F.1_g019200 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 4.5e-24 115.2 108 59.3
Lalb_Chr02g0159761 Lupinus albus HOM05D007350 ORTHO05D009323 4.5e-24 115.2 92 68.5
COL.COLO4_17379 Corchorus olitorius HOM05D007350 ORTHO05D009323 1.3e-23 113.6 100 59.0
Lj2g0024385 Lotus japonicus HOM05D007350 ORTHO05D009323 1.3e-23 113.6 159 46.5
Oeu025102.1 Olea europaea HOM05D007350 ORTHO05D009323 1.3e-23 113.6 141 50.4
Ca_04216_v3 Cicer arietinum L. HOM05D007350 ORTHO05D009323 2.2e-23 112.8 104 56.7
TAR374G1157 Trochodendron aralioides HOM05D007350 ORTHO05D009323 2.2e-23 112.8 129 52.7
Phvul.004G019500 Phaseolus vulgaris HOM05D007350 ORTHO05D009323 6.5e-23 111.3 158 45.6
PSO782G4816 Papaver somniferum HOM05D007350 ORTHO05D009323 8.5e-23 110.9 127 51.2
CiPaw.05G085400 Carya illinoinensis HOM05D007350 ORTHO05D009323 1.1e-22 110.5 166 41.0
Actinidia18040 Actinidia chinensis HOM05D007350 ORTHO05D009323 1.5e-22 110.2 149 47.0
MSTRG.20506 Avicennia marina HOM05D007350 ORTHO05D009323 1.5e-22 110.2 88 69.3
Medtr6g007793 Medicago truncatula HOM05D007350 ORTHO05D009323 1.5e-22 110.2 164 43.3
Migut.B01238 Erythranthe guttata HOM05D007350 ORTHO05D009323 2.5e-22 109.4 86 70.9
PSO063G0872 Papaver somniferum HOM05D007350 ORTHO05D009323 2.5e-22 109.4 82 67.1
Rhsim03G0180300 Rhododendron simsii HOM05D007350 ORTHO05D009323 4.2e-22 108.6 165 44.8
Eucgr.G01372 Eucalyptus grandis HOM05D007350 ORTHO05D009323 5.5e-22 108.2 92 64.1
SGA_v2.0_scaffold124G33608 Striga asiatica HOM05D007350 ORTHO05D009323 5.5e-22 108.2 96 62.5
Psat1g060320 Pisum sativum HOM05D007350 ORTHO05D009323 9.5e-22 107.5 157 40.8
Thhalv10026464m.g Eutrema salsugineum HOM05D007350 ORTHO05D009323 1.2e-21 107.1 125 52.0
THA.LOC104807801 Tarenaya hassleriana HOM05D007350 ORTHO05D009323 2.8e-21 105.9 108 55.6
Actinidia20526 Actinidia chinensis HOM05D007350 ORTHO05D009323 4.7e-21 105.1 94 59.6
Sp7g37290 Schrenkiella parvula HOM05D007350 ORTHO05D009323 4.7e-21 105.1 106 53.8
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 8.0e-21 104.4 85 63.5
CAN.G112.14 Capsicum annuum HOM05D007350 ORTHO05D009323 1.4e-20 103.6 86 65.1
AUR62013001 Chenopodium quinoa HOM05D007350 ORTHO05D009323 1.8e-20 103.2 93 58.1
Sc08g0002720 Simmondsia chinensis HOM05D007350 ORTHO05D009323 1.8e-20 103.2 83 68.7
Sed0025246 Sechium edule HOM05D007350 ORTHO05D009323 3.0e-20 102.4 75 73.3
Cc09_g10330 Coffea canephora HOM05D007350 ORTHO05D009323 5.2e-20 101.7 83 65.1
Carub.0007s0037 Capsella rubella HOM05D007350 ORTHO05D009323 8.8e-20 100.9 157 45.2
PGR042G2321 Punica granatum HOM05D007350 ORTHO05D009323 8.8e-20 100.9 150 45.3
AUR62010011 Chenopodium quinoa HOM05D007350 ORTHO05D009323 1.2e-19 100.5 92 57.6
Nitab4.5_0005221g0020 Nicotiana tabacum HOM05D007350 ORTHO05D009323 9.8e-19 97.4 86 60.5
ATR0598G093 Amborella trichopoda HOM05D007350 ORTHO05D009323 1.7e-18 96.7 121 48.8
AT4G38490 Arabidopsis thaliana HOM05D007350 ORTHO05D009323 1.7e-18 96.7 78 64.1
AL7G10350 Arabidopsis lyrata HOM05D007350 ORTHO05D009323 2.2e-18 96.3 78 64.1
CARHR294210 Cardamine hirsuta HOM05D007350 ORTHO05D009323 2.2e-18 96.3 77 64.9
unitig_749.g14334 Utricularia gibba HOM05D000730 ORTHO05D000578 3.7e-18 95.5 102 57.8
Nitab4.5_0002598g0070 Nicotiana tabacum HOM05D007350 ORTHO05D009323 4.9e-18 95.1 124 48.4
Hund16245 Selenicereus undatus HOM05D007350 ORTHO05D009323 4.9e-18 95.1 82 59.8
Sopen05g029130 Solanum pennellii HOM05D007350 ORTHO05D009323 8.3e-18 94.4 145 42.8
BcaC01g00233 Brassica carinata HOM05D007350 ORTHO05D009323 1.1e-17 94.0 98 55.1
Atru.chr5.3441 Acer truncatum HOM05D007350 ORTHO05D009323 5.4e-17 91.7 79 62.0
Solyc05g050720.4 Solanum lycopersicum HOM05D007350 ORTHO05D009323 7.0e-17 91.3 87 59.8
Hma1.2p1_0032F.1_g019210 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 1.2e-16 90.5 63 77.8
Lsat_1_v5_gn_4_72021 Lactuca sativa HOM05D007350 ORTHO05D009323 1.2e-16 90.5 79 63.3
HanXRQChr10g0298081 Helianthus annuus HOM05D007350 ORTHO05D009323 1.6e-16 90.1 114 46.5
CDE05G3477 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 1.7e-15 86.7 91 53.8
RcHm_v2.0_Chr6g0278961 Rosa chinensis HOM05D007350 ORTHO05D009323 1.7e-15 86.7 114 42.1
A08p24200 Brassica napus HOM05D007350 ORTHO05D009323 3.8e-15 85.5 85 56.5
ECA234G1892 Erigeron canadensis HOM05D007350 ORTHO05D009323 3.8e-15 85.5 107 49.5
Os09g0450200 Oryza sativa ssp. japonica HOM05D007350 ORTHO05D009323 8.6e-15 84.3 70 58.6
Dinv09314 Davidia involucrata HOM05D007350 ORTHO05D009323 1.5e-14 83.6 130 38.5
BraA08t34374Z Brassica rapa HOM05D007350 ORTHO05D009323 2.5e-14 82.8 75 60.0
Atru.chr6.83 Acer truncatum HOM05D007350 ORTHO05D009323 3.3e-14 82.4 88 54.5
BcaC01g00225 Brassica carinata HOM05D007350 ORTHO05D009323 3.3e-14 82.4 77 59.7
BolC3t19964H Brassica oleracea HOM05D007350 ORTHO05D009323 5.6e-14 81.6 75 57.3
C03p77120 Brassica napus HOM05D007350 ORTHO05D009323 1.6e-13 80.1 75 56.0
MD10G1128000 Malus domestica HOM05D007350 ORTHO05D009323 2.8e-13 79.3 54 81.5
CDE11G0403 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 2.3e-12 76.3 62 66.1
CSS0005535 Camellia sinensis var. sinensis HOM05D007350 ORTHO05D009323 1.5e-11 73.6 111 39.6
Mapoly0060s0112 Marchantia polymorpha HOM05D007350 ORTHO05D009323 2.4e-09 66.2 92 41.3
Pp3c6_16710 Physcomitrium patens HOM05D007350 ORTHO05D009323 2.0e-08 63.2 79 45.6
SalBow5G3345 Salvia bowleyana HOM05D007350 ORTHO05D009323 7.8e-08 61.2 57 49.1
SEGI_00987 Sequoiadendron giganteum HOM05D007350 ORTHO05D009323 3.9e-07 58.9 95 37.9
PGSC0003DMG400006999 Solanum tuberosum HOM05D007350 ORTHO05D009323 9.5e-06 54.3 51 52.9


User provided reference genes

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