Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0497 Cannabis sativa HOM05D007340 ORTHO05D008979 2.5e-131 473.4 578 100.0
Haze_00999 Corylus avellana HOM05D007340 ORTHO05D008979 5.7e-67 259.6 234 56.8
CiPaw.01G157600 Carya illinoinensis HOM05D007340 ORTHO05D008979 1.3e-66 258.5 234 56.0
MD02G1277500 Malus domestica HOM05D007340 ORTHO05D008979 6.3e-66 256.1 211 58.3
Cfa015550 Carpinus fangiana HOM05D007340 ORTHO05D008979 4.5e-64 250.0 234 55.1
QL06p005970 Quercus lobata HOM05D007340 ORTHO05D008979 6.5e-63 246.1 228 53.5
Atru.chr4.2678 Acer truncatum HOM05D007340 ORTHO05D008979 4.2e-62 243.4 233 51.9
Atru.chr4.2685 Acer truncatum HOM05D007340 ORTHO05D008979 4.2e-62 243.4 233 51.9
Prupe.3G113000 Prunus persica HOM05D007340 ORTHO05D008979 5.5e-62 243.0 213 55.9
ClCG05G001120 Citrullus lanatus HOM05D007340 ORTHO05D008979 6.7e-60 236.1 244 52.0
FvH4_4g14110 Fragaria vesca HOM05D007340 ORTHO05D008979 8.8e-60 235.7 207 52.2
Ciclev10007051m.g Citrus clementina HOM05D007340 ORTHO05D008979 1.1e-59 235.3 194 56.7
RcHm_v2.0_Chr4g0419121 Rosa chinensis HOM05D007340 ORTHO05D008979 1.9e-59 234.6 224 52.7
Dinv44465 Davidia involucrata HOM05D007340 ORTHO05D008979 3.3e-59 233.8 227 52.4
FAN12G4271 Fragaria x ananassa HOM05D007340 ORTHO05D008979 5.7e-59 233.0 207 51.7
CSS0042730 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 9.7e-59 232.3 222 51.4
Sed0013632 Sechium edule HOM05D007340 ORTHO05D008979 9.7e-59 232.3 239 50.2
Lalb_Chr15g0087231 Lupinus albus HOM05D007340 ORTHO05D008979 1.3e-58 231.9 218 55.5
Ca_06378_v3 Cicer arietinum L. HOM05D007340 ORTHO05D008979 1.7e-58 231.5 224 51.3
MELO3C006065.2 Cucumis melo HOM05D007340 ORTHO05D008979 2.2e-58 231.1 195 57.4
Cpa.g.sc16.57 Carica papaya HOM05D007340 ORTHO05D008979 4.8e-58 229.9 235 49.8
Duzib151G0496 Durio zibethinus HOM05D007340 ORTHO05D008979 1.1e-57 228.8 236 48.7
Hma1.2p1_0511F.1_g169170 Hydrangea macrophylla HOM05D007340 ORTHO05D008979 3.1e-57 227.3 210 51.4
Hma1.2p1_2025F.1_g311460 Hydrangea macrophylla HOM05D007340 ORTHO05D008979 1.2e-56 225.3 210 51.0
CsaV3_3G008450 Cucumis sativus L. HOM05D007340 ORTHO05D008979 2.0e-56 224.6 244 49.2
Rhsim04G0212000 Rhododendron simsii HOM05D001150 ORTHO05D000998 4.5e-56 223.4 224 52.2
TWI73G0639 Tripterygium wilfordii HOM05D007340 ORTHO05D008979 4.5e-56 223.4 248 49.2
vmacro17996 Vaccinium macrocarpon HOM05D007340 ORTHO05D008979 1.0e-55 222.2 193 58.0
Manes.03G186900 Manihot esculenta HOM05D007340 ORTHO05D008979 1.3e-55 221.9 226 48.7
Gorai.006G074200 Gossypium raimondii HOM05D001150 ORTHO05D008979 2.9e-55 220.7 235 48.9
Gohir.D09G059500 Gossypium hirsutum HOM05D001150 ORTHO05D008979 5.0e-55 219.9 235 48.9
Medtr5g094770 Medicago truncatula HOM05D007340 ORTHO05D008979 1.1e-54 218.8 221 51.1
Ca_09841_v3 Cicer arietinum L. HOM05D007340 ORTHO05D008979 1.4e-54 218.4 224 50.4
Lj4P768T34 Lonicera japonica HOM05D007340 ORTHO05D008979 2.5e-54 217.6 217 48.8
COL.COLO4_13983 Corchorus olitorius HOM05D007340 ORTHO05D008979 3.2e-54 217.2 238 47.9
Gohir.A09G060400 Gossypium hirsutum HOM05D001150 ORTHO05D008979 1.2e-53 215.3 235 48.5
Cc03_g02890 Coffea canephora HOM05D007340 ORTHO05D008979 1.6e-53 214.9 196 52.6
TAR633G1855 Trochodendron aralioides HOM05D007340 ORTHO05D008979 4.7e-53 213.4 196 52.0
arahy.Tifrunner.gnm1.ann1.PE1C4R Arachis hypogaea HOM05D007340 ORTHO05D008979 7.9e-53 212.6 228 48.2
Thecc.04G270900 Theobroma cacao HOM05D007340 ORTHO05D008979 1.0e-52 212.2 235 48.1
AL6G30300 Arabidopsis lyrata HOM05D007340 ORTHO05D008979 3.3e-51 207.2 222 47.7
Phvul.003G036500 Phaseolus vulgaris HOM05D007340 ORTHO05D008979 5.7e-51 206.5 224 50.4
Oeu021055.1 Olea europaea HOM05D007340 ORTHO05D008979 4.8e-50 203.4 222 45.5
Carub.0006s1725 Capsella rubella HOM05D007340 ORTHO05D008979 8.2e-50 202.6 226 46.5
Peaxi162Scf00095g00723 Petunia axillaris HOM05D006658 ORTHO05D008515 8.2e-50 202.6 192 49.0
CAN.G522.11 Capsicum annuum HOM05D007340 ORTHO05D008979 1.1e-49 202.2 239 43.5
AT5G18950 Arabidopsis thaliana HOM05D007340 ORTHO05D008979 2.4e-49 201.1 222 46.8
Sopen01g032100 Solanum pennellii HOM05D007340 ORTHO05D008979 9.1e-49 199.1 239 42.7
PGSC0003DMG400004352 Solanum tuberosum HOM05D007340 ORTHO05D008979 9.1e-49 199.1 198 46.5
Sc19g0004680 Simmondsia chinensis HOM05D007340 ORTHO05D008979 2.0e-48 198.0 195 48.7
Solyc01g080310.4 Solanum lycopersicum HOM05D007340 ORTHO05D008979 4.5e-48 196.8 239 43.1
PGR065G0011 Punica granatum HOM05D007340 ORTHO05D008979 5.9e-48 196.4 193 48.2
THA.LOC104827130 Tarenaya hassleriana HOM05D007340 ORTHO05D008979 5.9e-48 196.4 235 43.0
EL10Ac8g18451 Beta vulgaris HOM05D007340 ORTHO05D008979 1.0e-47 195.7 192 52.1
Nitab4.5_0003070g0020 Nicotiana tabacum HOM05D007340 ORTHO05D008979 1.7e-47 194.9 198 45.5
Migut.G00250 Erythranthe guttata HOM05D007340 ORTHO05D008979 2.9e-47 194.1 191 51.8
Nitab4.5_0000059g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008979 6.5e-47 193.0 198 45.5
Psat2g009000 Pisum sativum HOM05D007340 ORTHO05D008979 6.5e-47 193.0 222 46.8
TPR.G28181 Trifolium pratense HOM05D007340 ORTHO05D008979 1.4e-46 191.8 218 45.0
CARHR194060 Cardamine hirsuta HOM05D007340 ORTHO05D008979 7.2e-46 189.5 216 44.4
Eucgr.C04132 Eucalyptus grandis HOM05D007340 ORTHO05D008979 7.2e-46 189.5 194 49.0
Lj5g0026289 Lotus japonicus HOM05D007340 ORTHO05D008979 7.2e-46 189.5 211 46.4
GSVIVG01017865001 Vitis vinifera HOM05D007340 ORTHO05D008979 1.2e-45 188.7 190 51.1
Eucgr.C03952 Eucalyptus grandis HOM05D007340 ORTHO05D008979 1.6e-45 188.3 194 49.0
AUR62010965 Chenopodium quinoa HOM05D007340 ORTHO05D008979 4.7e-45 186.8 226 45.1
Sp6g25440 Schrenkiella parvula HOM05D007340 ORTHO05D008979 6.7e-44 183.0 232 42.7
BcaC04g18636 Brassica carinata HOM05D007340 ORTHO05D008979 8.8e-44 182.6 230 42.6
Psat7g256640 Pisum sativum HOM05D007340 ORTHO05D008979 8.8e-44 182.6 222 44.6
A10p20720 Brassica napus HOM05D007340 ORTHO05D008979 2.2e-42 177.9 234 40.6
BraA10t44135Z Brassica rapa HOM05D007340 ORTHO05D008979 2.2e-42 177.9 231 40.3
FAN17G2541 Fragaria x ananassa HOM05D007340 ORTHO05D008979 2.8e-42 177.6 182 46.7
SHI00355 Sapria himalayana HOM05D007340 ORTHO05D008979 2.8e-42 177.6 193 47.2
TPR.G14140 Trifolium pratense HOM05D007340 ORTHO05D008979 4.8e-42 176.8 213 43.7
AUR62021475 Chenopodium quinoa HOM05D007340 ORTHO05D008979 1.4e-41 175.3 194 47.9
Glyma.07G161500 Glycine max HOM05D007340 ORTHO05D008979 1.4e-41 175.3 217 46.1
BcaB08g36633 Brassica carinata HOM05D007340 ORTHO05D008979 1.8e-41 174.9 195 46.2
BolC9t58627H Brassica oleracea HOM05D007340 ORTHO05D008979 2.4e-41 174.5 234 41.0
C09p57580 Brassica napus HOM05D007340 ORTHO05D008979 2.0e-40 171.4 234 40.6
CSS0023925 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 4.5e-40 170.2 222 43.2
SalBow2G1987 Salvia bowleyana HOM05D007340 ORTHO05D008979 8.5e-39 166.0 191 42.9
PSO170G6018 Papaver somniferum HOM05D007340 ORTHO05D008979 1.6e-37 161.8 192 42.7
Lsat_1_v5_gn_5_93381 Lactuca sativa HOM05D007340 ORTHO05D008979 4.4e-35 153.7 184 40.2
VMungo1215G3235 Vigna mungo HOM05D007340 ORTHO05D008979 1.2e-32 145.6 219 40.2
HanXRQChr17g0539051 Helianthus annuus HOM05D007340 ORTHO05D008979 3.8e-31 140.6 177 39.0
TPR.G15743 Trifolium pratense HOM05D007340 ORTHO05D008979 7.2e-30 136.3 145 49.0
HanXRQChr10g0314401 Helianthus annuus HOM05D007340 ORTHO05D008979 1.2e-29 135.6 173 37.0
Aqoxy1G00377 Aquilegia oxysepala HOM05D007340 ORTHO05D008979 6.8e-28 129.8 160 43.1
CDE04G1227 Ceratophyllum demersum HOM05D007340 ORTHO05D008979 1.1e-25 122.5 220 31.8
CSS0014652 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 5.4e-25 120.2 152 42.8
CSS0037889 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 1.3e-23 115.5 115 47.8
ECA234G3193 Erigeron canadensis HOM05D005830 ORTHO05D007212 2.3e-23 114.8 164 39.0
Gohir.D08G046350 Gossypium hirsutum HOM05D007340 ORTHO05D008979 1.9e-22 111.7 114 50.0
Gorai.004G045600 Gossypium raimondii HOM05D007340 ORTHO05D008979 1.9e-22 111.7 114 50.0
CSS0002707 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 7.5e-19 99.8 116 45.7
DCAR_030586 Daucus carota HOM05D007340 ORTHO05D008979 7.5e-19 99.8 120 40.8
Lsat_1_v5_gn_8_10680 Lactuca sativa HOM05D007340 ORTHO05D008979 3.3e-14 84.3 106 38.7
BcaB01g05283 Brassica carinata HOM05D007340 ORTHO05D008979 5.6e-14 83.6 143 37.1
ATR0582G031 Amborella trichopoda HOM05D007340 ORTHO05D008979 7.3e-14 83.2 106 37.7
Sed0010805 Sechium edule HOM05D002890 ORTHO05D009847 3.0e-12 77.8 164 30.5
ClCG03G004730 Citrullus lanatus HOM05D002890 ORTHO05D009847 6.8e-12 76.6 168 30.4
COL.COLO4_31777 Corchorus olitorius HOM05D002890 ORTHO05D009847 8.9e-12 76.3 165 27.9
MELO3C035731.2 Cucumis melo HOM05D002890 ORTHO05D009847 1.7e-10 72.0 169 28.4
CSS0001323 Camellia sinensis var. sinensis HOM05D002890 ORTHO05D009847 6.4e-10 70.1 169 27.2
Oeu037581.1 Olea europaea HOM05D007202 ORTHO05D009125 7.0e-09 66.6 140 29.3
SEGI_12196 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 9.2e-09 66.2 216 25.5
C03p10720 Brassica napus HOM05D007340 ORTHO05D008979 2.7e-08 64.7 72 47.2
CDE05G0489 Ceratophyllum demersum HOM05D007202 ORTHO05D009125 3.5e-08 64.3 153 26.8
GSVIVG01026178001 Vitis vinifera HOM05D007202 ORTHO05D009125 6.0e-08 63.5 144 27.8
Ciclev10014539m.g Citrus clementina HOM05D002890 ORTHO05D009847 7.8e-08 63.2 159 28.9
Ah.04g150870 Amaranthus hybridus HOM05D000591 ORTHO05D000579 1.3e-07 62.4 80 41.2
Manes.16G011600 Manihot esculenta HOM05D007956 ORTHO05D010152 1.3e-07 62.4 208 25.0
RcHm_v2.0_Chr4g0419111 Rosa chinensis HOM05D007340 ORTHO05D008979 1.3e-07 62.4 65 50.8
Lj3g0013909 Lotus japonicus HOM05D006819 ORTHO05D008763 1.7e-07 62.0 205 22.0
CARHR012020 Cardamine hirsuta HOM05D002890 ORTHO05D009847 2.3e-07 61.6 225 22.7
Cc02_g04950 Coffea canephora HOM05D000104 ORTHO05D009920 2.3e-07 61.6 147 29.9
DCAR_026889 Daucus carota HOM05D007202 ORTHO05D009125 2.3e-07 61.6 165 23.6
Actinidia21102 Actinidia chinensis HOM05D007202 ORTHO05D009125 3.0e-07 61.2 162 26.5
Gohir.D02G188900 Gossypium hirsutum HOM05D007202 ORTHO05D009125 3.0e-07 61.2 158 26.6
Medtr7g090340 Medicago truncatula HOM05D006931 ORTHO05D008782 3.9e-07 60.8 170 27.1
TPR.G40710 Trifolium pratense HOM05D007340 ORTHO05D008979 5.0e-07 60.5 51 54.9
MSTRG.22930 Avicennia marina HOM05D007202 ORTHO05D009125 8.6e-07 59.7 162 27.2
PGR142G1500 Punica granatum HOM05D007202 ORTHO05D009125 8.6e-07 59.7 161 24.2
SEGI_11175 Sequoiadendron giganteum HOM05D007202 ORTHO05D009125 8.6e-07 59.7 155 27.1
CSS0032654 Camellia sinensis var. sinensis HOM05D007202 ORTHO05D009125 1.1e-06 59.3 145 27.6
MBI07_g03828_MAGBIO Magnolia biondii HOM05D007202 ORTHO05D009125 1.1e-06 59.3 140 27.1
Gorai.005G211700 Gossypium raimondii HOM05D007202 ORTHO05D009125 1.5e-06 58.9 158 25.9
Potri.004G020900 Populus trichocarpa HOM05D007956 ORTHO05D010152 1.9e-06 58.5 203 24.1
Sc10g0006710 Simmondsia chinensis HOM05D007202 ORTHO05D009125 1.9e-06 58.5 153 26.8
CSS0048316 Camellia sinensis var. sinensis HOM05D007202 ORTHO05D009125 2.5e-06 58.2 145 27.6
Sabra04G0011500 Salix brachista HOM05D007956 ORTHO05D010152 2.5e-06 58.2 203 23.6
C09p68630 Brassica napus HOM05D007202 ORTHO05D009125 3.3e-06 57.8 142 28.2
COL.COLO4_06641 Corchorus olitorius HOM05D007956 ORTHO05D010152 4.3e-06 57.4 208 25.0
Hma1.2p1_2428F.1_g321970 Hydrangea macrophylla HOM05D007202 ORTHO05D009125 4.3e-06 57.4 157 26.8
TPR.G8749 Trifolium pratense HOM05D006931 ORTHO05D008782 4.3e-06 57.4 173 27.2
Migut.O00313 Erythranthe guttata HOM05D006596 ORTHO05D008497 5.6e-06 57.0 166 24.7
Thhalv10015588m.g Eutrema salsugineum HOM05D007202 ORTHO05D009125 5.6e-06 57.0 146 28.1
Gohir.A03G165700 Gossypium hirsutum HOM05D007202 ORTHO05D009125 5.6e-06 57.0 158 25.3
Sp6g34640 Schrenkiella parvula HOM05D007202 ORTHO05D009125 5.6e-06 57.0 146 27.4
Atru.chr10.2229 Acer truncatum HOM05D002890 ORTHO05D009847 7.3e-06 56.6 90 31.1
Duzib235G1205 Durio zibethinus HOM05D007956 ORTHO05D010152 7.3e-06 56.6 229 24.5
Eucgr.J00877 Eucalyptus grandis HOM05D007202 ORTHO05D009125 7.3e-06 56.6 152 25.7
Lj3C848G3 Lonicera japonica HOM05D007202 ORTHO05D009125 7.3e-06 56.6 147 25.9
Nn1g01889 Nelumbo nucifera HOM05D007340 ORTHO05D008979 7.3e-06 56.6 66 45.5
BraA10t44884Z Brassica rapa HOM05D007202 ORTHO05D009125 9.5e-06 56.2 142 27.5
Nn7g37484 Nelumbo nucifera HOM05D007202 ORTHO05D009125 9.5e-06 56.2 156 24.4
Solyc10g049570.3 Solanum lycopersicum HOM05D007173 ORTHO05D009151 9.5e-06 56.2 138 23.9
Thecc.02G157500 Theobroma cacao HOM05D007202 ORTHO05D009125 9.5e-06 56.2 163 25.8


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