Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 3.9e-75 284.6 138 100.0
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 1.6e-44 183.0 138 65.2
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 2.7e-44 182.2 139 67.6
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 3.6e-44 181.8 138 64.5
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 6.1e-44 181.0 144 61.8
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 8.0e-44 180.6 139 67.6
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 2.3e-43 179.1 140 65.7
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 6.8e-43 177.6 138 63.8
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 6.8e-43 177.6 135 63.7
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 6.8e-43 177.6 138 63.0
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 8.8e-43 177.2 129 68.2
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 8.8e-43 177.2 135 66.7
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 1.2e-42 176.8 136 63.2
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 1.2e-42 176.8 138 66.7
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 3.4e-42 175.3 139 64.7
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 3.4e-42 175.3 139 62.6
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 4.4e-42 174.9 142 61.3
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 7.5e-42 174.1 136 61.0
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 7.5e-42 174.1 138 60.9
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 1.7e-41 172.9 135 60.7
Ciclev10030019m.g Citrus clementina HOM05D007233 ORTHO05D009043 2.8e-41 172.2 139 61.9
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 3.7e-41 171.8 139 61.9
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 8.3e-41 170.6 137 59.9
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 8.3e-41 170.6 139 62.6
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 1.1e-40 170.2 135 60.0
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 1.4e-40 169.9 134 62.7
Sed0016181 Sechium edule HOM05D007233 ORTHO05D009043 1.4e-40 169.9 136 60.3
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 1.8e-40 169.5 139 61.9
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 1.8e-40 169.5 130 66.2
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 2.4e-40 169.1 139 61.9
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 3.1e-40 168.7 134 62.7
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 4.1e-40 168.3 141 61.0
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 5.4e-40 167.9 135 59.3
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 5.4e-40 167.9 144 61.8
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 9.1e-40 167.2 130 64.6
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 1.2e-39 166.8 136 61.8
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 1.6e-39 166.4 137 58.4
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 1.6e-39 166.4 140 60.0
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 2.0e-39 166.0 140 57.9
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 2.0e-39 166.0 143 60.8
CsaV3_1G014310 Cucumis sativus L. HOM05D007233 ORTHO05D009043 2.7e-39 165.6 138 57.2
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 2.7e-39 165.6 138 61.6
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 3.5e-39 165.2 136 59.6
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 4.5e-39 164.9 136 59.6
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 7.7e-39 164.1 143 58.0
MELO3C004843.2 Cucumis melo HOM05D007233 ORTHO05D009043 1.7e-38 162.9 138 56.5
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 2.9e-38 162.2 140 58.6
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 3.8e-38 161.8 138 59.4
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 5.0e-38 161.4 138 57.2
arahy.Tifrunner.gnm1.ann1.5NF9YD Arachis hypogaea HOM05D007233 ORTHO05D009043 6.5e-38 161.0 158 54.4
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 1.9e-37 159.5 138 60.1
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 2.5e-37 159.1 140 58.6
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 2.5e-37 159.1 138 55.8
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 4.2e-37 158.3 138 58.0
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 4.2e-37 158.3 137 56.2
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 1.2e-36 156.8 137 57.7
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 1.2e-36 156.8 137 57.7
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 1.2e-36 156.8 137 57.7
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 6.1e-36 154.5 134 59.0
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 8.0e-36 154.1 137 56.2
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 8.0e-36 154.1 137 56.2
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 1.8e-35 152.9 140 55.0
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 2.3e-35 152.5 135 56.3
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 3.0e-35 152.1 131 58.0
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 8.8e-35 150.6 138 53.6
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 1.2e-34 150.2 137 55.5
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 2.0e-34 149.4 138 53.6
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 2.0e-34 149.4 138 53.6
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 3.4e-34 148.7 138 55.1
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 3.4e-34 148.7 138 55.1
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 4.4e-34 148.3 137 55.5
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 5.7e-34 147.9 145 55.9
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 1.3e-33 146.7 138 52.2
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 1.8e-32 142.9 171 48.0
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 2.4e-32 142.5 133 55.6
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 3.1e-32 142.1 147 51.0
Atru.chr3.3421 Acer truncatum HOM05D007233 ORTHO05D009043 1.7e-30 136.3 98 66.3
MBI04_g22192_MAGBIO Magnolia biondii HOM05D007233 ORTHO05D009043 2.3e-30 136.0 102 65.7
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 1.9e-29 132.9 135 51.1
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 2.5e-29 132.5 135 51.1
Pp3c26_4940 Physcomitrium patens HOM05D007233 ORTHO05D009043 5.7e-26 121.3 137 48.2
Pp3c26_4950 Physcomitrium patens HOM05D007233 ORTHO05D009043 5.7e-26 121.3 137 48.2
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 8.3e-25 117.5 117 53.8
Zm00001eb053200 Zea mays HOM05D007233 ORTHO05D009043 4.1e-24 115.2 140 49.3
Cfa010203 Carpinus fangiana HOM05D007233 ORTHO05D009043 7.0e-24 114.4 101 61.4
Cfa020420 Carpinus fangiana HOM05D007233 ORTHO05D009043 1.2e-23 113.6 94 61.7
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 1.2e-23 113.6 101 54.5
Os03g0684300 Oryza sativa ssp. japonica HOM05D007233 ORTHO05D009043 4.6e-23 111.7 141 46.8
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 1.0e-22 110.5 100 57.0
Haze_23479 Corylus avellana HOM05D007233 ORTHO05D009043 1.1e-21 107.1 93 61.3
Nn6g35132 Nelumbo nucifera HOM05D007233 ORTHO05D009043 1.1e-21 107.1 99 54.5
Haze_23472 Corylus avellana HOM05D007233 ORTHO05D009043 2.5e-21 105.9 139 48.2
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 7.3e-21 104.4 121 47.9
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 9.5e-21 104.0 90 61.1
Haze_23491 Corylus avellana HOM05D007233 ORTHO05D009043 1.2e-20 103.6 149 43.6
Mapoly0016s0182 Marchantia polymorpha HOM05D007233 ORTHO05D009043 4.7e-20 101.7 103 46.6
arahy.Tifrunner.gnm1.ann1.9UEW9D Arachis hypogaea HOM05D007233 ORTHO05D009043 3.1e-19 99.0 122 46.7
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 8.6e-14 80.9 107 39.3
CDE02G1642 Ceratophyllum demersum HOM05D007233 ORTHO05D009043 9.5e-13 77.4 83 51.8
Haze_23488 Corylus avellana HOM05D007233 ORTHO05D009043 6.2e-12 74.7 85 52.9
Sc12g0003860 Simmondsia chinensis HOM05D007233 ORTHO05D009043 8.1e-12 74.3 81 49.4
Duzib168G0428 Durio zibethinus HOM05D007233 ORTHO05D009043 1.5e-10 70.1 104 41.3
Oeu035529.3 Olea europaea HOM05D007233 ORTHO05D009043 5.4e-08 61.6 81 40.7
Oeu000616.2 Olea europaea HOM05D007233 ORTHO05D009043 4.6e-07 58.5 88 43.2
arahy.Tifrunner.gnm1.ann1.3ZRX2Z Arachis hypogaea HOM05D007233 ORTHO05D009043 1.3e-06 57.0 66 45.5


User provided reference genes

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