Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0274 Cannabis sativa HOM05D004795 ORTHO05D005518 7.9e-118 427.2 224 100.0
QL02p051034 Quercus lobata HOM05D004795 ORTHO05D005518 7.1e-58 228.0 231 61.5
QL12p016552 Quercus lobata HOM05D004795 ORTHO05D005518 7.1e-58 228.0 231 61.5
Cfa007915 Carpinus fangiana HOM05D004795 ORTHO05D005518 1.2e-57 227.3 229 62.4
Prupe.3G143600 Prunus persica HOM05D004795 ORTHO05D005518 2.1e-57 226.5 235 63.8
COL.COLO4_09348 Corchorus olitorius HOM05D004795 ORTHO05D005518 1.9e-55 219.9 232 60.3
CiPaw.03G062800 Carya illinoinensis HOM05D004795 ORTHO05D005518 3.3e-55 219.2 232 61.2
MD09G1253700 Malus domestica HOM05D004795 ORTHO05D005518 3.3e-55 219.2 237 60.3
TWI53G1522 Tripterygium wilfordii HOM05D004795 ORTHO05D005518 2.1e-54 216.5 227 61.2
Thecc.04G132300 Theobroma cacao HOM05D004795 ORTHO05D005518 6.2e-54 214.9 232 60.3
MD17G1245500 Malus domestica HOM05D004795 ORTHO05D005518 8.1e-54 214.5 241 59.8
Duzib133G0847 Durio zibethinus HOM05D004795 ORTHO05D005518 1.8e-53 213.4 227 60.4
Manes.02G069600 Manihot esculenta HOM05D004795 ORTHO05D005518 1.8e-53 213.4 218 64.2
TWI77G0518 Tripterygium wilfordii HOM05D004795 ORTHO05D005518 2.0e-52 209.9 228 59.6
Duzib138G0938 Durio zibethinus HOM05D004795 ORTHO05D005518 5.8e-52 208.4 234 59.0
CiPaw.04G043000 Carya illinoinensis HOM05D004795 ORTHO05D005518 1.4e-50 203.8 233 59.2
Haze_14167 Corylus avellana HOM05D004795 ORTHO05D005518 1.2e-49 200.7 229 57.6
Duzib211G0180 Durio zibethinus HOM05D004795 ORTHO05D005518 4.6e-49 198.7 222 58.1
Sabra17G0096100 Salix brachista HOM05D004795 ORTHO05D005518 6.0e-49 198.4 253 54.2
Potri.017G116100 Populus trichocarpa HOM05D004795 ORTHO05D005518 2.3e-48 196.4 253 53.8
Sabra04G0081300 Salix brachista HOM05D004795 ORTHO05D005518 2.3e-48 196.4 231 57.6
Manes.01G111300 Manihot esculenta HOM05D004795 ORTHO05D005518 5.1e-48 195.3 209 62.2
Gohir.D11G325800 Gossypium hirsutum HOM05D004795 ORTHO05D005518 6.2e-46 188.3 214 57.0
Gohir.D11G325700 Gossypium hirsutum HOM05D004795 ORTHO05D005518 1.8e-45 186.8 195 60.0
ClCG05G012330 Citrullus lanatus HOM05D004795 ORTHO05D005518 5.3e-45 185.3 205 57.6
Ciclev10012794m.g Citrus clementina HOM05D004795 ORTHO05D005518 1.5e-44 183.7 223 55.2
CsaV3_3G020240 Cucumis sativus L. HOM05D004795 ORTHO05D005518 2.0e-44 183.3 206 57.8
Eucgr.J01506 Eucalyptus grandis HOM05D004795 ORTHO05D005518 1.9e-42 176.8 211 58.3
Atru.chr1.1662 Acer truncatum HOM05D004795 ORTHO05D005518 2.4e-42 176.4 222 54.1
arahy.Tifrunner.gnm1.ann1.HZ9SBP Arachis hypogaea HOM05D001490 ORTHO05D005518 4.2e-42 175.6 246 52.0
Cpa.g.sc170.57 Carica papaya HOM05D004795 ORTHO05D005518 5.4e-42 175.3 222 56.3
PGR004G2449 Punica granatum HOM05D004795 ORTHO05D005518 5.4e-42 175.3 232 50.9
Gohir.D11G326300 Gossypium hirsutum HOM05D004795 ORTHO05D005518 1.2e-41 174.1 212 54.7
VMungo0464G1679 Vigna mungo HOM05D004795 ORTHO05D005518 1.2e-41 174.1 229 54.1
Nitab4.5_0000912g0060 Nicotiana tabacum HOM05D004795 ORTHO05D005518 1.7e-40 170.2 238 50.4
Glyma.13G045200 Glycine max HOM05D004795 ORTHO05D005518 3.0e-40 169.5 226 51.3
Sopen02g030830 Solanum pennellii HOM05D004795 ORTHO05D005518 3.0e-40 169.5 239 51.5
Dinv33956 Davidia involucrata HOM05D001490 ORTHO05D001450 3.9e-40 169.1 189 62.4
TAR629G1480 Trochodendron aralioides HOM05D004795 ORTHO05D005518 1.1e-39 167.5 229 50.7
MELO3C023735.2 Cucumis melo HOM05D004795 ORTHO05D005518 1.5e-39 167.2 189 56.6
FAN02G3195 Fragaria x ananassa HOM05D004795 ORTHO05D005518 1.9e-39 166.8 219 56.6
FAN05G2248 Fragaria x ananassa HOM05D004795 ORTHO05D005518 3.3e-39 166.0 222 55.9
CAN.G625.30 Capsicum annuum HOM05D004795 ORTHO05D005518 1.3e-38 164.1 223 52.0
Rhsim10G0068600 Rhododendron simsii HOM05D004795 ORTHO05D005518 2.1e-38 163.3 239 51.5
Cc07_g08730 Coffea canephora HOM05D004795 ORTHO05D005518 2.8e-38 162.9 240 52.5
FAN14G2363 Fragaria x ananassa HOM05D004795 ORTHO05D005518 4.8e-38 162.2 224 54.9
FAN14G5069 Fragaria x ananassa HOM05D004795 ORTHO05D005518 4.8e-38 162.2 224 54.9
MSTRG.3555 Avicennia marina HOM05D004795 ORTHO05D005518 6.2e-38 161.8 240 49.6
FvH4_6g36230 Fragaria vesca HOM05D004795 ORTHO05D005518 1.1e-37 161.0 226 54.4
Gohir.D12G053200 Gossypium hirsutum HOM05D004795 ORTHO05D005518 1.8e-37 160.2 180 56.7
Gorai.008G056400 Gossypium raimondii HOM05D004795 ORTHO05D005518 1.8e-37 160.2 180 56.1
Phvul.004G066100 Phaseolus vulgaris HOM05D004795 ORTHO05D005518 2.4e-37 159.8 225 51.1
PGSC0003DMG402026390 Solanum tuberosum HOM05D004795 ORTHO05D005518 3.1e-37 159.5 239 50.2
RcHm_v2.0_Chr2g0148201 Rosa chinensis HOM05D004795 ORTHO05D005518 9.0e-37 157.9 227 55.5
FAN09G4185 Fragaria x ananassa HOM05D004795 ORTHO05D005518 1.5e-36 157.1 214 54.2
Glyma.19G049900 Glycine max HOM05D004795 ORTHO05D005518 1.5e-36 157.1 228 48.2
PGR042G3836 Punica granatum HOM05D004795 ORTHO05D005518 3.4e-36 156.0 206 53.4
Sed0015257 Sechium edule HOM05D004795 ORTHO05D005518 4.5e-36 155.6 217 51.2
Oeu050378.1 Olea europaea HOM05D004795 ORTHO05D005518 1.7e-35 153.7 232 51.3
Gohir.A12G054400 Gossypium hirsutum HOM05D004795 ORTHO05D005518 4.9e-35 152.1 180 55.0
Oeu039734.1 Olea europaea HOM05D004795 ORTHO05D005518 6.4e-35 151.8 241 49.0
TAR371G0696 Trochodendron aralioides HOM05D004795 ORTHO05D005518 1.1e-34 151.0 211 52.1
Migut.L00330 Erythranthe guttata HOM05D004795 ORTHO05D005518 1.9e-34 150.2 238 47.5
Oeu016627.1 Olea europaea HOM05D004795 ORTHO05D005518 7.1e-34 148.3 238 48.7
Hma1.2p1_1109F.1_g258120 Hydrangea macrophylla HOM05D004795 ORTHO05D005518 1.6e-33 147.1 217 50.7
Phvul.008G007200 Phaseolus vulgaris HOM05D004795 ORTHO05D005518 1.0e-32 144.4 186 54.8
TAR622G0902 Trochodendron aralioides HOM05D004795 ORTHO05D005518 1.0e-32 144.4 229 48.9
VMungo1383G1737 Vigna mungo HOM05D004795 ORTHO05D005518 1.0e-32 144.4 214 48.6
Lj2g0010000 Lotus japonicus HOM05D004795 ORTHO05D005518 1.3e-32 144.1 216 50.5
DCAR_025909 Daucus carota HOM05D004795 ORTHO05D005518 2.3e-32 143.3 199 53.3
Nn3g17899 Nelumbo nucifera HOM05D004795 ORTHO05D005518 5.6e-31 138.7 230 47.0
Glyma.08G366700 Glycine max HOM05D004795 ORTHO05D005518 9.6e-31 137.9 175 54.3
Glyma.18G295700 Glycine max HOM05D004795 ORTHO05D005518 8.1e-30 134.8 221 48.0
Lsat_1_v5_gn_4_154580 Lactuca sativa HOM05D004795 ORTHO05D005518 8.1e-30 134.8 214 46.7
Gohir.A11G163900 Gossypium hirsutum HOM05D004795 ORTHO05D005518 5.3e-29 132.1 212 48.1
Ah.16g101690 Amaranthus hybridus HOM05D004795 ORTHO05D005518 1.2e-28 131.0 222 44.6
Peaxi162Scf00394g00712 Petunia axillaris HOM05D004795 ORTHO05D005518 2.0e-28 130.2 174 50.6
Gorai.007G182000 Gossypium raimondii HOM05D004795 ORTHO05D005518 2.6e-28 129.8 212 47.6
Ca_08078_v3 Cicer arietinum L. HOM05D004795 ORTHO05D005518 1.0e-27 127.9 182 49.5
Gorai.001G202200 Gossypium raimondii HOM05D004795 ORTHO05D005518 4.9e-27 125.6 165 53.3
Lj1g0003158 Lotus japonicus HOM05D004795 ORTHO05D005518 4.9e-27 125.6 172 52.9
Potri.004G098200 Populus trichocarpa HOM05D004795 ORTHO05D005518 1.2e-25 120.9 140 57.1
Gorai.007G356700 Gossypium raimondii HOM05D004795 ORTHO05D005518 1.6e-25 120.6 175 49.1
Aa31LG9G17140 Aethionema arabicum HOM05D004795 ORTHO05D005518 4.6e-25 119.0 227 44.5
SGA_v2.0_scaffold115G32104 Striga asiatica HOM05D004795 ORTHO05D005518 4.6e-25 119.0 219 42.9
A04p11270 Brassica napus HOM05D004795 ORTHO05D005518 1.3e-24 117.5 236 42.4
BraA04t16787Z Brassica rapa HOM05D004795 ORTHO05D005518 1.3e-24 117.5 236 42.4
BcaB06g27183 Brassica carinata HOM05D004795 ORTHO05D005518 1.8e-24 117.1 238 42.9
THA.LOC104805574 Tarenaya hassleriana HOM05D004795 ORTHO05D005518 1.8e-24 117.1 239 42.3
HanXRQChr11g0330661 Helianthus annuus HOM05D004795 ORTHO05D005518 2.3e-24 116.7 173 49.7
BcaC02g09641 Brassica carinata HOM05D004795 ORTHO05D005518 3.9e-24 115.9 236 41.9
BolC4t26077H Brassica oleracea HOM05D004795 ORTHO05D005518 3.9e-24 115.9 236 41.9
Nitab4.5_0004416g0090 Nicotiana tabacum HOM05D004795 ORTHO05D005518 3.9e-24 115.9 176 48.3
C04p44990 Brassica napus HOM05D004795 ORTHO05D005518 1.5e-23 114.0 240 41.2
THA.LOC104822635 Tarenaya hassleriana HOM05D004795 ORTHO05D005518 1.5e-23 114.0 236 42.4
Aa31LG2G3430 Aethionema arabicum HOM05D004795 ORTHO05D005518 5.7e-23 112.1 238 39.9
Sp7g03720 Schrenkiella parvula HOM05D004795 ORTHO05D005518 7.4e-23 111.7 235 41.3
TPR.G31528 Trifolium pratense HOM05D004795 ORTHO05D005518 1.3e-22 110.9 195 45.1
Gohir.D11G170200 Gossypium hirsutum HOM05D004795 ORTHO05D005518 2.1e-22 110.2 290 36.9
BraA02t06447Z Brassica rapa HOM05D004795 ORTHO05D005518 2.8e-22 109.8 210 40.5
TPR.G32442 Trifolium pratense HOM05D004795 ORTHO05D005518 4.8e-22 109.0 316 36.1
Thhalv10027906m.g Eutrema salsugineum HOM05D004795 ORTHO05D005518 1.4e-21 107.5 238 42.0
Lalb_Chr02g0158191 Lupinus albus HOM05D004795 ORTHO05D005518 1.4e-21 107.5 190 43.7
AT5G38300 Arabidopsis thaliana HOM05D004795 ORTHO05D005518 1.8e-21 107.1 259 38.2
Sc11g0008370 Simmondsia chinensis HOM05D004795 ORTHO05D005518 2.4e-21 106.7 201 42.3
Aqoxy3G00247 Aquilegia oxysepala HOM05D004795 ORTHO05D005518 1.5e-20 104.0 251 39.0
Psat3g098240 Pisum sativum HOM05D004795 ORTHO05D005518 1.0e-19 101.3 189 43.9
BcaC03g14785 Brassica carinata HOM05D004795 ORTHO05D005518 1.3e-19 100.9 218 39.0
AUR62043981 Chenopodium quinoa HOM05D004795 ORTHO05D005518 1.7e-19 100.5 258 37.6
Lalb_Chr10g0091311 Lupinus albus HOM05D004795 ORTHO05D005518 3.8e-19 99.4 186 43.5
CARHR214290 Cardamine hirsuta HOM05D004795 ORTHO05D005518 5.0e-19 99.0 238 39.9
Sp5g21970 Schrenkiella parvula HOM05D004795 ORTHO05D005518 6.5e-19 98.6 233 38.2
Psat1g081000 Pisum sativum HOM05D004795 ORTHO05D005518 8.5e-19 98.2 268 36.6
Medtr6g018780 Medicago truncatula HOM05D004795 ORTHO05D005518 1.4e-18 97.4 122 55.7
Medtr7g082230 Medicago truncatula HOM05D004795 ORTHO05D005518 1.4e-18 97.4 186 43.0
AL7G52500 Arabidopsis lyrata HOM05D004795 ORTHO05D005518 1.9e-18 97.1 261 37.5
BolC2t08386H Brassica oleracea HOM05D004795 ORTHO05D005518 1.9e-18 97.1 213 38.0
Thhalv10019032m.g Eutrema salsugineum HOM05D004795 ORTHO05D005518 2.5e-18 96.7 225 39.1
Carub.0005s1274 Capsella rubella HOM05D004795 ORTHO05D005518 3.2e-18 96.3 218 42.7
Carub.0002s1332 Capsella rubella HOM05D004795 ORTHO05D005518 4.2e-18 95.9 195 42.1
BcaB05g24226 Brassica carinata HOM05D004795 ORTHO05D005518 5.5e-18 95.5 240 37.5
C02p22330 Brassica napus HOM05D004795 ORTHO05D005518 7.2e-18 95.1 211 37.4
AT1G67035 Arabidopsis thaliana HOM05D004795 ORTHO05D005518 9.3e-18 94.7 196 41.3
ECA232G0641 Erigeron canadensis HOM05D000072 ORTHO05D000026 9.3e-18 94.7 132 50.8
AUR62023290 Chenopodium quinoa HOM05D004795 ORTHO05D005518 1.2e-17 94.4 307 32.6
HanXRQChr11g0325401 Helianthus annuus HOM05D004795 ORTHO05D005518 2.1e-17 93.6 185 43.2
CARHR059450 Cardamine hirsuta HOM05D004795 ORTHO05D005518 3.6e-17 92.8 179 43.6
A07p33770 Brassica napus HOM05D004795 ORTHO05D005518 1.3e-16 90.9 231 34.2
AUR62009011 Chenopodium quinoa HOM05D004795 ORTHO05D005518 5.1e-16 89.0 296 32.8
Gohir.D11G325975 Gossypium hirsutum HOM05D004795 ORTHO05D005518 5.1e-16 89.0 86 60.5
MBI09_g36997_MAGBIO Magnolia biondii HOM05D004795 ORTHO05D005518 6.7e-16 88.6 207 39.6
unitig_32.g11886 Utricularia gibba HOM05D004795 ORTHO05D005518 6.7e-16 88.6 188 39.4
AL2G25370 Arabidopsis lyrata HOM05D004795 ORTHO05D005518 1.1e-15 87.8 191 41.4
Solyc02g086140.2 Solanum lycopersicum HOM05D004795 ORTHO05D005518 2.5e-15 86.7 129 51.2
BraA07t31003Z Brassica rapa HOM05D004795 ORTHO05D005518 4.3e-15 85.9 234 35.5
C06p43160 Brassica napus HOM05D004795 ORTHO05D005518 9.7e-15 84.7 218 34.9
Actinidia15890 Actinidia chinensis HOM05D004795 ORTHO05D005518 1.3e-14 84.3 103 54.4
Thecc.07G096700 Theobroma cacao HOM05D004795 ORTHO05D002259 1.3e-14 84.3 110 53.6
BolC6t39123H Brassica oleracea HOM05D004795 ORTHO05D005518 2.2e-14 83.6 211 37.0
Ah.06g188560 Amaranthus hybridus HOM05D004795 ORTHO05D005518 1.8e-13 80.5 138 42.0
PSO541G1476 Papaver somniferum HOM05D004795 ORTHO05D005518 9.0e-13 78.2 160 40.0
PSO532G0010 Papaver somniferum HOM05D004795 ORTHO05D005518 2.0e-12 77.0 146 43.2
BcaNung06250 Brassica carinata HOM05D004795 ORTHO05D005518 2.9e-11 73.2 215 34.0
PSO541G4271 Papaver somniferum HOM05D004795 ORTHO05D005518 1.4e-10 70.9 158 39.2
SalBow7G1622 Salvia bowleyana HOM05D004795 ORTHO05D005518 4.2e-10 69.3 132 45.5
SalBow7G4115 Salvia bowleyana HOM05D004795 ORTHO05D005518 4.2e-10 69.3 132 45.5
SalBow5G0757 Salvia bowleyana HOM05D004795 ORTHO05D005518 1.4e-08 64.3 85 51.8
Gohir.A07G174000 Gossypium hirsutum HOM05D004795 ORTHO05D005518 1.8e-08 63.9 98 48.0
unitig_748.g8746 Utricularia gibba HOM05D004795 ORTHO05D005518 1.1e-07 61.2 96 49.0
ATR0752G028 Amborella trichopoda HOM05D004795 ORTHO05D005518 1.7e-06 57.4 187 35.3


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