Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0244 Cannabis sativa HOM05D007775 ORTHO05D009858 1.6e-157 559.3 274 100.0
Prupe.1G140100 Prunus persica HOM05D007775 ORTHO05D009858 4.0e-87 325.5 257 61.9
Cfa015361 Carpinus fangiana HOM05D007775 ORTHO05D009858 3.3e-81 305.8 264 57.6
MD13G1171700 Malus domestica HOM05D007775 ORTHO05D009858 6.2e-80 301.6 247 59.9
FvH4_4g17570 Fragaria vesca HOM05D007775 ORTHO05D009858 8.0e-80 301.2 260 56.9
FAN12G2546 Fragaria x ananassa HOM05D007775 ORTHO05D009858 6.8e-79 298.1 258 56.6
RcHm_v2.0_Chr4g0421471 Rosa chinensis HOM05D007775 ORTHO05D009858 3.4e-78 295.8 260 57.3
FAN07G2931 Fragaria x ananassa HOM05D007775 ORTHO05D009858 4.4e-78 295.4 260 56.5
CiPaw.02G085200 Carya illinoinensis HOM05D007775 ORTHO05D009858 4.1e-76 288.9 255 56.5
Ciclev10005542m.g Citrus clementina HOM05D007775 ORTHO05D009858 1.9e-73 280.0 277 52.7
Atru.chr4.2786 Acer truncatum HOM05D007775 ORTHO05D009858 2.1e-72 276.6 262 53.4
QL06p007731 Quercus lobata HOM05D007775 ORTHO05D009858 8.1e-72 274.6 269 53.2
COL.COLO4_13909 Corchorus olitorius HOM05D007775 ORTHO05D009858 1.1e-71 274.2 268 52.6
Thecc.04G279800 Theobroma cacao HOM05D007775 ORTHO05D009858 1.1e-71 274.2 272 50.7
Duzib151G1205 Durio zibethinus HOM05D007775 ORTHO05D009858 9.9e-70 267.7 266 51.5
Dinv38311 Davidia involucrata HOM05D007775 ORTHO05D009858 1.3e-69 267.3 273 51.3
TAR362G1316 Trochodendron aralioides HOM05D007775 ORTHO05D009858 6.4e-69 265.0 260 53.5
Manes.15G015200 Manihot esculenta HOM05D007775 ORTHO05D009858 3.2e-68 262.7 264 54.5
Potri.008G215200 Populus trichocarpa HOM05D007775 ORTHO05D009858 9.2e-68 261.2 267 52.1
Rhsim04G0218300 Rhododendron simsii HOM05D007775 ORTHO05D009858 1.2e-67 260.8 278 50.0
MELO3C021348.2 Cucumis melo HOM05D007775 ORTHO05D009858 1.3e-66 257.3 271 49.4
Aa31LG5G20500 Aethionema arabicum HOM05D007775 ORTHO05D009858 2.3e-66 256.5 271 49.4
Gohir.A10G161700 Gossypium hirsutum HOM05D007775 ORTHO05D009858 2.3e-66 256.5 276 50.4
PGR031G0649 Punica granatum HOM05D007775 ORTHO05D009858 2.3e-66 256.5 255 54.1
Gohir.D10G168200 Gossypium hirsutum HOM05D007775 ORTHO05D009858 3.0e-66 256.1 275 49.5
Gorai.011G187800 Gossypium raimondii HOM05D007775 ORTHO05D009858 6.6e-66 255.0 278 49.6
ClCG06G005300 Citrullus lanatus HOM05D007775 ORTHO05D009858 1.9e-65 253.4 255 50.6
THA.LOC104820248 Tarenaya hassleriana HOM05D007775 ORTHO05D009858 4.3e-65 252.3 269 48.7
CsaV3_6G017340 Cucumis sativus L. HOM05D007775 ORTHO05D009858 3.6e-64 249.2 270 48.1
TWI09G0118 Tripterygium wilfordii HOM05D007775 ORTHO05D009858 1.8e-63 246.9 267 49.8
Sabra08G0155600 Salix brachista HOM05D007775 ORTHO05D009858 1.5e-62 243.8 266 51.1
AT2G39100 Arabidopsis thaliana HOM05D007775 ORTHO05D009858 4.4e-62 242.3 271 48.0
GSVIVG01017782001 Vitis vinifera HOM05D007775 ORTHO05D009858 1.3e-61 240.7 241 51.9
Sed0017003 Sechium edule HOM05D007775 ORTHO05D009858 2.2e-61 240.0 254 48.4
Nn3g16301 Nelumbo nucifera HOM05D007775 ORTHO05D009858 4.9e-61 238.8 247 50.6
Cpa.g.sc197.12 Carica papaya HOM05D007775 ORTHO05D009858 6.4e-61 238.4 259 48.6
Sp4g21450 Schrenkiella parvula HOM05D007775 ORTHO05D009858 8.4e-61 238.0 288 46.5
Eucgr.B01278 Eucalyptus grandis HOM05D007775 ORTHO05D009858 9.2e-60 234.6 276 48.6
Carub.0004s2115 Capsella rubella HOM05D007775 ORTHO05D009858 1.2e-59 234.2 259 47.9
PGSC0003DMG400030783 Solanum tuberosum HOM05D007775 ORTHO05D009858 1.6e-59 233.8 252 49.6
CARHR133870 Cardamine hirsuta HOM05D007775 ORTHO05D009858 4.6e-59 232.3 279 47.3
BraA04t18439Z Brassica rapa HOM05D007775 ORTHO05D009858 1.3e-58 230.7 279 46.6
Actinidia40242 Actinidia chinensis HOM05D007775 ORTHO05D009858 1.7e-58 230.3 272 48.2
arahy.Tifrunner.gnm1.ann1.J8QG6N Arachis hypogaea HOM05D007775 ORTHO05D009858 1.7e-58 230.3 263 49.0
Oeu021116.1 Olea europaea HOM05D007775 ORTHO05D009858 6.6e-58 228.4 276 44.6
Solyc06g054580.4 Solanum lycopersicum HOM05D007775 ORTHO05D009858 8.6e-58 228.0 247 48.6
arahy.Tifrunner.gnm1.ann1.KJPE0P Arachis hypogaea HOM05D007775 ORTHO05D009858 1.1e-57 227.6 275 46.2
Lj6A671T60 Lonicera japonica HOM05D007775 ORTHO05D009858 4.3e-57 225.7 261 46.4
Nitab4.5_0002148g0040 Nicotiana tabacum HOM05D007775 ORTHO05D009858 5.6e-57 225.3 266 46.6
Lsat_1_v5_gn_5_52881 Lactuca sativa HOM05D007775 ORTHO05D009858 7.3e-57 224.9 261 46.4
Thhalv10017000m.g Eutrema salsugineum HOM05D007775 ORTHO05D009858 9.6e-57 224.6 244 47.5
Sopen06g019650 Solanum pennellii HOM05D007775 ORTHO05D009858 2.1e-56 223.4 247 47.8
Nitab4.5_0001459g0060 Nicotiana tabacum HOM05D007775 ORTHO05D009858 2.8e-56 223.0 254 47.6
BolC4t28205H Brassica oleracea HOM05D007775 ORTHO05D009858 3.6e-56 222.6 260 46.9
C04p67030 Brassica napus HOM05D007775 ORTHO05D009858 8.1e-56 221.5 258 46.1
Lalb_Chr13g0303771 Lupinus albus HOM05D007775 ORTHO05D009858 1.4e-55 220.7 272 47.4
MBI19_g01943_MAGBIO Magnolia biondii HOM05D007775 ORTHO05D009858 1.4e-55 220.7 285 43.2
Cc03_g02150 Coffea canephora HOM05D007775 ORTHO05D009858 1.3e-53 214.2 281 42.7
A04p29770 Brassica napus HOM05D007775 ORTHO05D009858 6.4e-53 211.8 241 48.1
Ah.13g074550 Amaranthus hybridus HOM05D007775 ORTHO05D009858 8.4e-53 211.5 276 44.2
PSO210G6602 Papaver somniferum HOM05D007775 ORTHO05D009858 4.6e-51 205.7 281 44.5
HanXRQChr03g0080871 Helianthus annuus HOM05D007775 ORTHO05D009858 5.1e-50 202.2 278 41.0
DCAR_024553 Daucus carota HOM05D007775 ORTHO05D009858 1.9e-49 200.3 222 45.9
CAN.G256.16 Capsicum annuum HOM05D007775 ORTHO05D009858 2.1e-48 196.8 247 45.7
FAN12G2785 Fragaria x ananassa HOM05D007775 ORTHO05D009858 2.4e-47 193.4 186 52.2
BcaC02g12905 Brassica carinata HOM05D007775 ORTHO05D009858 2.6e-46 189.9 206 50.0
Peaxi162Scf00033g01324 Petunia axillaris HOM05D007775 ORTHO05D009858 3.0e-42 176.4 236 42.4
Sc06g0007440 Simmondsia chinensis HOM05D007775 ORTHO05D009858 8.1e-40 168.3 259 40.9
Aqoxy2G03074 Aquilegia oxysepala HOM05D007775 ORTHO05D009858 1.1e-39 167.9 226 41.6
ATR0706G202 Amborella trichopoda HOM05D007775 ORTHO05D009858 1.8e-39 167.2 206 42.2
ECA240G4119 Erigeron canadensis HOM05D007775 ORTHO05D009858 4.5e-38 162.5 231 39.8
AL4G36400 Arabidopsis lyrata HOM05D007775 ORTHO05D009858 5.8e-38 162.2 186 46.2
AL92U10060 Arabidopsis lyrata HOM05D007775 ORTHO05D009858 5.1e-34 149.1 176 45.5
Haze_01245 Corylus avellana HOM05D007775 ORTHO05D009858 6.7e-34 148.7 111 64.0
QL06p007898 Quercus lobata HOM05D007775 ORTHO05D009858 7.1e-28 128.6 118 56.8
Pp3c21_11960 Physcomitrium patens HOM05D007775 ORTHO05D009858 2.3e-26 123.6 286 32.5
CSS0035717 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 7.4e-25 118.6 80 67.5
CSS0050081 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 2.2e-24 117.1 80 67.5
SMO147G0036 Selaginella moellendorffii HOM05D007775 ORTHO05D009858 1.1e-23 114.8 304 28.9
CSS0036115 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 2.4e-23 113.6 80 66.2
Prupe.8G004900 Prunus persica HOM05D007775 ORTHO05D009858 1.7e-21 107.5 85 58.8
vmacro08108 Vaccinium macrocarpon HOM05D007775 ORTHO05D009858 2.1e-19 100.5 72 62.5
SEGI_15450 Sequoiadendron giganteum HOM05D007775 ORTHO05D009858 3.1e-15 86.7 108 40.7
MSTRG.10078 Avicennia marina HOM05D007775 ORTHO05D009858 3.4e-14 83.2 118 40.7
SEGI_08073 Sequoiadendron giganteum HOM05D007775 ORTHO05D009858 1.3e-13 81.3 143 35.0
COL.COLO4_10908 Corchorus olitorius HOM05D007775 ORTHO05D009858 7.9e-11 72.0 72 50.0
Duzib106G0694 Durio zibethinus HOM05D006625 ORTHO05D008060 4.1e-07 59.7 245 27.3


User provided reference genes

Program Settings