Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0210 Cannabis sativa HOM05D005692 ORTHO05D006953 6.9e-62 240.4 112 100.0
RcHm_v2.0_Chr2g0093151 Rosa chinensis HOM05D005692 ORTHO05D006953 2.2e-44 182.2 96 82.3
FvH4_1g07240 Fragaria vesca HOM05D005692 ORTHO05D006953 8.5e-44 180.3 96 81.2
FAN26G0193 Fragaria x ananassa HOM05D005692 ORTHO05D006953 8.5e-44 180.3 96 81.2
MELO3C015461.2 Cucumis melo HOM05D005692 ORTHO05D006953 1.4e-43 179.5 97 76.3
ClCG03G015670 Citrullus lanatus HOM05D005692 ORTHO05D006953 1.9e-43 179.1 97 78.4
MD02G1077000 Malus domestica HOM05D005692 ORTHO05D006953 2.5e-43 178.7 94 78.7
CsaV3_1G040340 Cucumis sativus L. HOM05D005692 ORTHO05D006953 3.2e-43 178.3 97 76.3
Prupe.7G211400 Prunus persica HOM05D005692 ORTHO05D006953 4.2e-43 177.9 94 77.7
AUR62039390 Chenopodium quinoa HOM05D005692 ORTHO05D006953 9.3e-43 176.8 100 75.0
MD15G1205700 Malus domestica HOM05D005692 ORTHO05D006953 1.2e-42 176.4 90 82.2
FAN19G2784 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.6e-42 176.0 96 78.1
Ah.09g223860 Amaranthus hybridus HOM05D005692 ORTHO05D006953 2.1e-42 175.6 100 74.0
Potri.012G001800 Populus trichocarpa HOM05D005692 ORTHO05D006953 2.1e-42 175.6 92 78.3
Sabra12G0019500 Salix brachista HOM05D005692 ORTHO05D006953 2.1e-42 175.6 92 78.3
Sabra12G0019700 Salix brachista HOM05D005692 ORTHO05D006953 2.1e-42 175.6 92 78.3
vmacro06285 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 4.6e-42 174.5 99 73.7
vmacro23428 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 4.6e-42 174.5 99 73.7
EL10Ac2g04637 Beta vulgaris HOM05D005692 ORTHO05D006953 6.1e-42 174.1 100 73.0
Gorai.005G027900 Gossypium raimondii HOM05D005692 ORTHO05D006953 1.0e-41 173.3 93 78.5
COL.COLO4_18212 Corchorus olitorius HOM05D005692 ORTHO05D006953 1.3e-41 172.9 92 78.3
Gohir.A02G019200 Gossypium hirsutum HOM05D005692 ORTHO05D006953 5.1e-41 171.0 92 78.3
Gohir.D02G022500 Gossypium hirsutum HOM05D005692 ORTHO05D006953 5.1e-41 171.0 92 78.3
Duzib151G0847 Durio zibethinus HOM05D005692 ORTHO05D006953 6.7e-41 170.6 92 77.2
Manes.03G032800 Manihot esculenta HOM05D005692 ORTHO05D006953 6.7e-41 170.6 91 76.9
Thecc.09G090700 Theobroma cacao HOM05D005692 ORTHO05D006953 6.7e-41 170.6 92 77.2
Ah.10g037300 Amaranthus hybridus HOM05D005692 ORTHO05D006953 8.7e-41 170.2 100 72.0
FvH4_1g24820 Fragaria vesca HOM05D005692 ORTHO05D006953 8.7e-41 170.2 96 76.0
Dinv36757 Davidia involucrata HOM05D005692 ORTHO05D006953 1.1e-40 169.9 92 75.0
Sopen12g003750 Solanum pennellii HOM05D005692 ORTHO05D006953 1.5e-40 169.5 93 76.3
SGA_v2.0_scaffold62G21600 Striga asiatica HOM05D005692 ORTHO05D006953 1.5e-40 169.5 103 70.9
FAN23G0510 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.5e-40 168.7 90 80.0
FAN26G1568 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.5e-40 168.7 90 80.0
Oeu039606.1 Olea europaea HOM05D005692 ORTHO05D006953 2.5e-40 168.7 97 70.1
FAN19G0937 Fragaria x ananassa HOM05D005692 ORTHO05D006953 3.3e-40 168.3 95 76.8
Psat6g162800 Pisum sativum HOM05D005692 ORTHO05D006953 3.3e-40 168.3 95 72.6
Solyc12g008810.2 Solanum lycopersicum HOM05D005692 ORTHO05D006953 3.3e-40 168.3 93 75.3
PGSC0003DMG400000281 Solanum tuberosum HOM05D005692 ORTHO05D006953 3.3e-40 168.3 93 75.3
Psat6g183720 Pisum sativum HOM05D005692 ORTHO05D006953 4.3e-40 167.9 95 72.6
Migut.J00600 Erythranthe guttata HOM05D005692 ORTHO05D006953 5.7e-40 167.5 99 69.7
Migut.J01065 Erythranthe guttata HOM05D005692 ORTHO05D006953 5.7e-40 167.5 99 69.7
Rhsim03G0233100 Rhododendron simsii HOM05D005692 ORTHO05D006953 5.7e-40 167.5 94 72.3
Hund14283 Selenicereus undatus HOM05D005692 ORTHO05D006953 5.7e-40 167.5 93 74.2
Sc14g0000750 Simmondsia chinensis HOM05D005692 ORTHO05D006953 5.7e-40 167.5 93 73.1
CAN.G1241.20 Capsicum annuum HOM05D005692 ORTHO05D006953 7.4e-40 167.2 93 73.1
Cpa.g.sc20.158 Carica papaya HOM05D005692 ORTHO05D006953 7.4e-40 167.2 91 78.0
Nitab4.5_0000540g0260 Nicotiana tabacum HOM05D005692 ORTHO05D006953 7.4e-40 167.2 93 74.2
Nitab4.5_0009931g0010 Nicotiana tabacum HOM05D005692 ORTHO05D006953 7.4e-40 167.2 93 74.2
Peaxi162Scf00015g00716 Petunia axillaris HOM05D005692 ORTHO05D006953 7.4e-40 167.2 93 74.2
SGA_v2.0_scaffold852G53671 Striga asiatica HOM05D005692 ORTHO05D006953 9.7e-40 166.8 103 69.9
Medtr7g051450 Medicago truncatula HOM05D005692 ORTHO05D006953 1.3e-39 166.4 94 72.3
Atru.BG.21.p Acer truncatum HOM05D005692 ORTHO05D006953 1.7e-39 166.0 89 77.5
Cfa003097 Carpinus fangiana HOM05D005692 ORTHO05D006953 1.7e-39 166.0 91 73.6
CiPaw.03G217300 Carya illinoinensis HOM05D005692 ORTHO05D006953 1.7e-39 166.0 93 72.0
Ca_07409_v3 Cicer arietinum L. HOM05D005692 ORTHO05D006953 1.7e-39 166.0 95 73.7
PGR102G3100 Punica granatum HOM05D005692 ORTHO05D006953 1.7e-39 166.0 92 73.9
Nn6g35447 Nelumbo nucifera HOM05D005692 ORTHO05D006953 2.2e-39 165.6 91 75.8
CSS0005546 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 2.8e-39 165.2 91 73.6
CSS0025569 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 2.8e-39 165.2 91 73.6
Ciclev10010392m.g Citrus clementina HOM05D005692 ORTHO05D006953 2.8e-39 165.2 96 72.9
Cc06_g11300 Coffea canephora HOM05D005692 ORTHO05D006953 2.8e-39 165.2 98 69.4
Nn8g38892 Nelumbo nucifera HOM05D005692 ORTHO05D006953 2.8e-39 165.2 91 74.7
Sed0014309 Sechium edule HOM05D005692 ORTHO05D006953 2.8e-39 165.2 92 75.0
TWI34G0948 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 2.8e-39 165.2 91 76.9
DCAR_011984 Daucus carota HOM05D005692 ORTHO05D006953 3.7e-39 164.9 93 71.0
HanXRQChr10g0319271 Helianthus annuus HOM05D005692 ORTHO05D006953 3.7e-39 164.9 92 75.0
Lalb_Chr03g0041061 Lupinus albus HOM05D005692 ORTHO05D006953 3.7e-39 164.9 93 69.9
Medtr7g021900 Medicago truncatula HOM05D005692 ORTHO05D006953 3.7e-39 164.9 94 72.3
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea HOM05D005692 ORTHO05D006953 4.8e-39 164.5 95 70.5
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 4.8e-39 164.5 95 70.5
Lj1g0023726 Lotus japonicus HOM05D005692 ORTHO05D006953 6.3e-39 164.1 93 73.1
Migut.H00760 Erythranthe guttata HOM05D005692 ORTHO05D006953 8.2e-39 163.7 99 67.7
AUR62033506 Chenopodium quinoa HOM05D005692 ORTHO05D006953 1.1e-38 163.3 120 61.7
ECA234G3968 Erigeron canadensis HOM05D005692 ORTHO05D006953 1.4e-38 162.9 92 72.8
Eucgr.C03889 Eucalyptus grandis HOM05D005692 ORTHO05D006953 1.4e-38 162.9 91 74.7
Glyma.18G151700 Glycine max HOM05D005692 ORTHO05D006953 1.4e-38 162.9 93 71.0
Phvul.008G136000 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 1.8e-38 162.5 93 69.9
Psat6g183640 Pisum sativum HOM05D005692 ORTHO05D006953 1.8e-38 162.5 95 70.5
Atru.BG.266.p Acer truncatum HOM05D005692 ORTHO05D006953 2.4e-38 162.2 89 75.3
Glyma.08G343600 Glycine max HOM05D005692 ORTHO05D006953 2.4e-38 162.2 93 71.0
Nitab4.5_0003152g0130 Nicotiana tabacum HOM05D005692 ORTHO05D006953 2.4e-38 162.2 93 73.1
SGA_v2.0_scaffold33G13431 Striga asiatica HOM05D005692 ORTHO05D006953 2.4e-38 162.2 107 67.3
Phvul.005G056600 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 3.1e-38 161.8 93 68.8
THA.LOC104801884 Tarenaya hassleriana HOM05D005692 ORTHO05D006953 6.9e-38 160.6 92 75.0
Lsat_1_v5_gn_5_145440 Lactuca sativa HOM05D005692 ORTHO05D006953 9.1e-38 160.2 90 73.3
Migut.H01159 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.2e-37 159.8 95 69.5
HanXRQChr12g0354791 Helianthus annuus HOM05D005692 ORTHO05D006953 1.2e-37 159.8 92 71.7
TAR626G0225 Trochodendron aralioides HOM05D005692 ORTHO05D006953 1.2e-37 159.8 86 75.6
Duzib187G1084 Durio zibethinus HOM05D005692 ORTHO05D006953 1.5e-37 159.5 92 69.6
Phvul.008G136200 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 2.0e-37 159.1 93 68.8
MBI13_g44212_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 2.6e-37 158.7 94 69.1
GSVIVG01015215001 Vitis vinifera HOM05D005692 ORTHO05D006953 2.6e-37 158.7 104 65.4
Psat6g183440 Pisum sativum HOM05D005692 ORTHO05D006953 5.9e-37 157.5 95 69.5
Duzib187G0878 Durio zibethinus HOM05D005692 ORTHO05D006953 1.7e-36 156.0 92 71.7
MBI14_g41836_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 1.7e-36 156.0 95 69.5
HPP92_009139 Vanilla planifolia HOM05D005692 ORTHO05D006953 2.2e-36 155.6 97 68.0
PSO210G0626 Papaver somniferum HOM05D005692 ORTHO05D006953 3.8e-36 154.8 87 71.3
PSO210G2337 Papaver somniferum HOM05D005692 ORTHO05D006953 3.8e-36 154.8 87 71.3
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 5.0e-36 154.5 90 71.1
TWI32G0831 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 1.4e-35 152.9 91 72.5
VMungo1383G2743 Vigna mungo HOM05D005692 ORTHO05D006953 4.2e-35 151.4 115 57.4
AL7G22650 Arabidopsis lyrata HOM05D005692 ORTHO05D006953 7.2e-35 150.6 97 64.9
AT4G29660 Arabidopsis thaliana HOM05D005692 ORTHO05D006953 7.2e-35 150.6 97 64.9
BcaC09g51744 Brassica carinata HOM05D005692 ORTHO05D006953 1.2e-34 149.8 90 68.9
Carub.0007s1086 Capsella rubella HOM05D005692 ORTHO05D006953 1.2e-34 149.8 90 68.9
CARHR237500 Cardamine hirsuta HOM05D005692 ORTHO05D006953 1.2e-34 149.8 90 68.9
Thhalv10026646m.g Eutrema salsugineum HOM05D005692 ORTHO05D006953 2.1e-34 149.1 90 68.9
SHI00379 Sapria himalayana HOM05D005692 ORTHO05D006953 2.1e-34 149.1 78 79.5
BcaC09g52211 Brassica carinata HOM05D005692 ORTHO05D006953 2.7e-34 148.7 90 67.8
A01p08470 Brassica napus HOM05D005692 ORTHO05D006953 2.7e-34 148.7 90 67.8
C01p09830 Brassica napus HOM05D005692 ORTHO05D006953 2.7e-34 148.7 90 67.8
BolC1t00945H Brassica oleracea HOM05D005692 ORTHO05D006953 2.7e-34 148.7 90 67.8
BraA01t00794Z Brassica rapa HOM05D005692 ORTHO05D006953 2.7e-34 148.7 90 67.8
unitig_748.g8121 Utricularia gibba HOM05D005692 ORTHO05D006953 2.7e-34 148.7 102 61.8
Sp7g27450 Schrenkiella parvula HOM05D005692 ORTHO05D006953 4.7e-34 147.9 90 68.9
Aa31LG2G20910 Aethionema arabicum HOM05D005692 ORTHO05D006953 6.1e-34 147.5 92 67.4
Sp3g29900 Schrenkiella parvula HOM05D005692 ORTHO05D006953 3.0e-33 145.2 90 67.8
Os05g0540200 Oryza sativa ssp. japonica HOM05D005692 ORTHO05D006953 1.1e-32 143.3 93 65.6
Peaxi162Scf00354g00223 Petunia axillaris HOM05D005692 ORTHO05D006953 1.5e-32 142.9 93 64.5
Aqoxy4G03142 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 2.0e-32 142.5 89 64.0
Nitab4.5_0003079g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 2.6e-32 142.1 81 72.8
ATR0602G199 Amborella trichopoda HOM05D005692 ORTHO05D006953 3.3e-32 141.7 87 67.8
Nitab4.5_0000095g0140 Nicotiana tabacum HOM05D005692 ORTHO05D006953 2.4e-30 135.6 101 59.4
Aqoxy1G00378 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 4.5e-29 131.3 89 65.2
Nitab4.5_0008958g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.0e-28 130.2 76 72.4
Nitab4.5_0004795g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 3.8e-28 128.3 78 70.5
Peaxi162Scf00498g00124 Petunia axillaris HOM05D005692 ORTHO05D006953 9.4e-27 123.6 69 75.4
CDE06G0459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 2.7e-26 122.1 77 63.6
SHI21206 Sapria himalayana HOM05D005692 ORTHO05D006953 6.1e-26 120.9 65 78.5
CDE06G1459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 4.4e-24 114.8 68 70.6
TPR.G24304 Trifolium pratense HOM05D005692 ORTHO05D006953 1.3e-23 113.2 212 31.6
FAN19G3189 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.4e-22 109.0 74 62.2
Psat0s10921g0080 Pisum sativum HOM05D005692 ORTHO05D006953 3.5e-21 105.1 61 73.8
SGA_v2.0_scaffold33G13433 Striga asiatica HOM05D000524 ORTHO05D000381 3.5e-21 105.1 77 64.9
Mapoly0063s0096 Marchantia polymorpha HOM05D005692 ORTHO05D006953 3.1e-14 82.0 66 54.5
CBR_g36562 Chara braunii HOM05D005692 ORTHO05D006953 5.3e-14 81.3 66 53.0
Zm00001eb294300 Zea mays HOM05D005692 ORTHO05D006953 2.5e-11 72.4 61 55.7
Haze_25902 Corylus avellana HOM05D001256 ORTHO05D001141 2.3e-09 65.9 36 69.4
Pp3c13_20310 Physcomitrium patens HOM05D005692 ORTHO05D006953 8.3e-07 57.4 57 43.9


User provided reference genes

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