Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0181 Cannabis sativa HOM05D012521 ORTHO05D011451 3.6e-168 595.1 369 100.0
CANSAT54G2560 Cannabis sativa HOM05D012521 ORTHO05D011451 3.5e-147 525.4 392 88.3
CANSAT25G0896 Cannabis sativa HOM05D012521 ORTHO05D011451 1.1e-84 317.8 167 92.8
CANSAT54G1078 Cannabis sativa HOM05D012521 ORTHO05D011451 2.7e-70 270.0 166 82.5
CANSAT54G1623 Cannabis sativa HOM05D012521 ORTHO05D011451 4.4e-65 252.7 135 91.9
CANSAT21G0118 Cannabis sativa HOM05D001338 ORTHO05D001239 7.8e-62 241.9 379 44.3
CANSAT64G0504 Cannabis sativa HOM05D012521 ORTHO05D011451 1.3e-56 224.6 193 97.4
CANSAT35G0719 Cannabis sativa HOM05D012521 ORTHO05D011451 2.9e-56 223.4 193 96.9
CANSAT01G0627 Cannabis sativa HOM05D012521 ORTHO05D011451 2.9e-40 170.2 160 61.2
CANSAT25G1308 Cannabis sativa HOM05D012521 ORTHO05D011451 1.1e-23 115.2 160 39.4
TWI36G1199 Tripterygium wilfordii HOM05D012521 ORTHO05D000116 7.9e-22 109.0 131 40.5
TWI59G0099 Tripterygium wilfordii HOM05D011150 ORTHO05D011451 1.5e-20 104.8 124 40.3
CANSAT35G0823 Cannabis sativa HOM05D014149 ORTHO05D004930 1.9e-20 104.4 161 36.6
CANSAT01G2276 Cannabis sativa HOM05D014149 ORTHO05D011451 2.5e-20 104.0 161 37.3
Oeu023903.1 Olea europaea HOM05D011150 ORTHO05D011451 1.1e-18 98.6 151 33.8
Oeu004951.1 Olea europaea HOM05D011150 ORTHO05D011451 3.4e-17 93.6 167 31.7
TWI14G0077 Tripterygium wilfordii HOM05D015010 ORTHO05D000116 6.5e-16 89.4 162 32.7
CANSAT64G0037 Cannabis sativa HOM05D014149 ORTHO05D011451 2.5e-15 87.4 184 32.1
Oeu050130.1 Olea europaea HOM05D011150 ORTHO05D011451 1.3e-13 81.6 120 32.5
CANSAT80G2559 Cannabis sativa HOM05D012521 ORTHO05D011451 6.7e-13 79.3 106 91.5
Oeu009578.1 Olea europaea HOM05D011150 ORTHO05D011451 2.5e-12 77.4 120 31.7
Oeu056350.1 Olea europaea HOM05D011150 ORTHO05D011451 2.5e-12 77.4 110 34.5
Atru.chr6.385 Acer truncatum HOM05D000706 ORTHO05D000116 1.6e-11 74.7 159 28.9
Atru.chr6.434_Atru.chr6.435 Acer truncatum HOM05D000706 ORTHO05D001554 2.2e-11 74.3 159 28.9
SalBow5G3953 Salvia bowleyana HOM05D010617 ORTHO05D011805 2.2e-11 74.3 122 33.6
SalBow2G1324 Salvia bowleyana HOM05D014149 ORTHO05D011805 6.3e-11 72.8 132 28.8
SalBow5G4492 Salvia bowleyana HOM05D010617 ORTHO05D011805 6.3e-11 72.8 129 34.1
CANSAT35G1012 Cannabis sativa HOM05D027150 ORTHO05D028423 1.1e-10 72.0 74 44.6
TWI36G1308 Tripterygium wilfordii HOM05D015010 ORTHO05D019384 1.4e-10 71.6 165 26.7
SalBow5G3742 Salvia bowleyana HOM05D010617 ORTHO05D011805 3.1e-10 70.5 166 30.7
QL10p064222 Quercus lobata HOM05D000009 ORTHO05D000116 4.1e-10 70.1 177 28.2
Os02g0307900 Oryza sativa ssp. japonica HOM05D000396 ORTHO05D000116 5.3e-10 69.7 127 33.1
Oeu014361.1 Olea europaea HOM05D011150 ORTHO05D011451 2.0e-09 67.8 68 42.6
SalBow7G4552 Salvia bowleyana HOM05D014149 ORTHO05D011805 2.6e-09 67.4 128 28.9
Rhsim08G0029200 Rhododendron simsii HOM05D009413 ORTHO05D000116 3.4e-09 67.0 121 29.8
SalBow5G1224 Salvia bowleyana HOM05D010617 ORTHO05D011805 5.9e-09 66.2 68 44.1
SalBow5G2537 Salvia bowleyana HOM05D010617 ORTHO05D011805 5.9e-09 66.2 68 44.1
Gohir.D12G185200 Gossypium hirsutum HOM05D004287 ORTHO05D004569 2.9e-08 63.9 206 25.2
Gorai.008G198600 Gossypium raimondii HOM05D004287 ORTHO05D004569 2.9e-08 63.9 206 25.2
Carub.0008s0643 Capsella rubella HOM05D003835 ORTHO05D004930 3.8e-08 63.5 125 30.4
HanXRQChr16g0505621 Helianthus annuus HOM05D010109 ORTHO05D011515 5.0e-08 63.2 151 24.5
QL05p071009 Quercus lobata HOM05D013248 ORTHO05D000116 6.5e-08 62.8 112 29.5
Gohir.A12G182300 Gossypium hirsutum HOM05D004287 ORTHO05D004569 8.5e-08 62.4 201 23.4
QL03p072853 Quercus lobata HOM05D009413 ORTHO05D000116 8.5e-08 62.4 164 26.2
QL03p072862 Quercus lobata HOM05D009413 ORTHO05D000116 8.5e-08 62.4 164 26.2
QL04p089085 Quercus lobata HOM05D009413 ORTHO05D000116 8.5e-08 62.4 164 26.2
Cpa.g.sc94.47 Carica papaya HOM05D004287 ORTHO05D004569 1.4e-07 61.6 121 30.6
Oeu037072.1 Olea europaea HOM05D011150 ORTHO05D011451 1.9e-07 61.2 116 30.2
Ciclev10003975m.g Citrus clementina HOM05D009413 ORTHO05D000116 3.2e-07 60.5 116 32.8
Ciclev10017562m.g Citrus clementina HOM05D009413 ORTHO05D000116 3.2e-07 60.5 118 32.2
Ciclev10019154m.g Citrus clementina HOM05D009413 ORTHO05D000116 3.2e-07 60.5 118 32.2
MBI03_g14059_MAGBIO Magnolia biondii HOM05D009404 ORTHO05D000116 3.2e-07 60.5 113 30.1
QL07p006222 Quercus lobata HOM05D000005 ORTHO05D026089 7.2e-07 59.3 126 32.5
CANSAT11G0758 Cannabis sativa HOM05D012521 ORTHO05D011451 9.4e-07 58.9 35 88.6
MBI04_g20979_MAGBIO Magnolia biondii HOM05D009404 ORTHO05D000116 9.4e-07 58.9 107 28.0
Oeu020665.1 Olea europaea HOM05D000784 ORTHO05D000116 9.4e-07 58.9 168 27.4
AUR62003618 Chenopodium quinoa HOM05D003820 ORTHO05D004540 1.2e-06 58.5 154 27.3
MBI04_g39792_MAGBIO Magnolia biondii HOM05D009404 ORTHO05D000116 1.2e-06 58.5 108 28.7
Oeu002338.1 Olea europaea HOM05D011150 ORTHO05D011451 1.2e-06 58.5 45 57.8
BcaC09g49552 Brassica carinata HOM05D003835 ORTHO05D004930 2.1e-06 57.8 172 27.9
Oeu011681.1 Olea europaea HOM05D000784 ORTHO05D000116 2.1e-06 57.8 133 30.8
CSS0040956 Camellia sinensis var. sinensis HOM05D035337 ORTHO05D000116 2.7e-06 57.4 144 30.6
Oeu016274.1 Olea europaea HOM05D000784 ORTHO05D000276 2.7e-06 57.4 130 29.2
SalBow5G1603 Salvia bowleyana HOM05D010617 ORTHO05D011805 2.7e-06 57.4 90 38.9
Duzib084G0708 Durio zibethinus HOM05D004287 ORTHO05D000116 3.6e-06 57.0 170 24.7
Oeu038370.1 Olea europaea HOM05D000784 ORTHO05D000116 4.6e-06 56.6 129 32.6
CSS0037614 Camellia sinensis var. sinensis HOM05D010739 ORTHO05D012209 6.1e-06 56.2 144 28.5
MBI04_g07086_MAGBIO Magnolia biondii HOM05D009404 ORTHO05D000116 6.1e-06 56.2 108 26.9
BolC8t47793H Brassica oleracea HOM05D003835 ORTHO05D004930 7.9e-06 55.8 131 29.0
Haze_22203 Corylus avellana HOM05D022083 ORTHO05D000116 7.9e-06 55.8 134 28.4
QL93p1902_0571 Quercus lobata HOM05D009413 ORTHO05D000116 7.9e-06 55.8 110 30.0


User provided reference genes

Program Settings