Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0145 Cannabis sativa HOM05D005806 ORTHO05D007119 1.4e-236 822.8 485 100.0
ClCG05G006280 Citrullus lanatus HOM05D005806 ORTHO05D007119 4.2e-116 422.5 514 52.1
Sed0007282 Sechium edule HOM05D005806 ORTHO05D007119 2.6e-113 413.3 526 54.4
Prupe.1G130400 Prunus persica HOM05D005806 ORTHO05D007119 1.4e-111 407.5 513 54.4
QL06p010760 Quercus lobata HOM05D005806 ORTHO05D007119 3.1e-111 406.4 528 59.8
Duzib212G0552 Durio zibethinus HOM05D005806 ORTHO05D007119 4.1e-111 406.0 526 52.7
TAR365G0056 Trochodendron aralioides HOM05D005806 ORTHO05D007119 3.8e-109 399.4 521 53.0
MD16G1163000 Malus domestica HOM05D005806 ORTHO05D007119 5.0e-109 399.1 509 53.0
TAR365G0831 Trochodendron aralioides HOM05D005806 ORTHO05D007119 1.1e-108 397.9 519 53.0
RcHm_v2.0_Chr4g0423561 Rosa chinensis HOM05D005806 ORTHO05D007119 4.2e-108 396.0 517 55.9
Manes.15G010100 Manihot esculenta HOM05D005806 ORTHO05D007119 1.2e-107 394.4 526 53.0
Duzib151G0580 Durio zibethinus HOM05D005806 ORTHO05D007119 4.0e-106 389.4 524 50.2
Ciclev10004804m.g Citrus clementina HOM05D005806 ORTHO05D007119 8.9e-106 388.3 525 54.7
COL.COLO4_13808 Corchorus olitorius HOM05D005806 ORTHO05D007119 8.9e-106 388.3 539 52.5
Thecc.04G290100 Theobroma cacao HOM05D005806 ORTHO05D007119 7.5e-105 385.2 522 51.5
FvH4_4g18770 Fragaria vesca HOM05D005806 ORTHO05D007119 3.7e-104 382.9 506 53.2
FAN12G2548 Fragaria x ananassa HOM05D005806 ORTHO05D007119 3.7e-104 382.9 506 53.2
FAN12G3921 Fragaria x ananassa HOM05D005806 ORTHO05D007119 3.7e-104 382.9 506 53.2
Lj3A825T23 Lonicera japonica HOM05D005806 ORTHO05D007119 8.3e-104 381.7 530 54.5
Atru.chr4.2914 Acer truncatum HOM05D005806 ORTHO05D007119 1.4e-103 380.9 521 48.2
Cpa.g.sc50.151 Carica papaya HOM05D005806 ORTHO05D007119 4.1e-103 379.4 529 55.0
Cfa015433 Carpinus fangiana HOM05D005806 ORTHO05D007119 1.2e-102 377.9 534 56.0
TWI09G1342 Tripterygium wilfordii HOM05D005806 ORTHO05D007119 1.0e-101 374.8 522 51.0
Dinv44345 Davidia involucrata HOM05D005806 ORTHO05D007119 3.8e-101 372.9 439 56.7
Gorai.011G193400 Gossypium raimondii HOM05D005806 ORTHO05D007119 6.6e-101 372.1 537 47.9
DCAR_002485 Daucus carota HOM05D005806 ORTHO05D007119 2.5e-100 370.2 503 48.1
Manes.03G199200 Manihot esculenta HOM05D005806 ORTHO05D007119 3.3e-100 369.8 531 51.2
Sabra10G0005700 Salix brachista HOM05D005806 ORTHO05D007119 1.2e-99 367.9 510 51.4
MELO3C006687.2 Cucumis melo HOM05D005806 ORTHO05D007119 1.6e-99 367.5 512 52.1
AUR62018055 Chenopodium quinoa HOM05D005806 ORTHO05D007119 2.1e-99 367.1 519 49.5
Solyc01g066050.3 Solanum lycopersicum HOM05D005806 ORTHO05D007119 2.1e-99 367.1 553 51.9
CSS0028282 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 8.0e-99 365.2 501 52.9
Potri.010G007000 Populus trichocarpa HOM05D005806 ORTHO05D007119 2.3e-98 363.6 509 52.5
FAN17G0801 Fragaria x ananassa HOM05D005806 ORTHO05D007119 3.0e-98 363.2 501 52.3
Gohir.D10G172900 Gossypium hirsutum HOM05D005806 ORTHO05D007119 1.2e-97 361.3 537 50.8
Sopen01g027600 Solanum pennellii HOM05D005806 ORTHO05D007119 2.0e-97 360.5 553 51.4
FAN07G1609 Fragaria x ananassa HOM05D005806 ORTHO05D007119 5.8e-97 359.0 509 50.9
CSS0038808 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 9.8e-97 358.2 492 54.3
CSS0004144 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 2.4e-95 353.6 492 53.7
CiPaw.01G145000 Carya illinoinensis HOM05D005806 ORTHO05D007119 5.4e-95 352.4 481 54.3
THA.LOC104802587 Tarenaya hassleriana HOM05D005806 ORTHO05D007119 7.0e-95 352.1 540 50.2
PGSC0003DMG400016813 Solanum tuberosum HOM05D005806 ORTHO05D007119 2.7e-94 350.1 522 47.5
CARHR092010 Cardamine hirsuta HOM05D005806 ORTHO05D007119 4.6e-94 349.4 521 45.9
Haze_01151 Corylus avellana HOM05D005806 ORTHO05D007119 1.0e-93 348.2 488 55.9
Aqoxy5G00792 Aquilegia oxysepala HOM05D005806 ORTHO05D007119 3.9e-93 346.3 497 46.3
arahy.Tifrunner.gnm1.ann1.TZ6N57 Arachis hypogaea HOM05D005806 ORTHO05D007119 3.9e-93 346.3 492 49.6
Lsat_1_v5_gn_6_78121 Lactuca sativa HOM05D005806 ORTHO05D007119 3.9e-93 346.3 520 49.4
Peaxi162Scf00065g01121 Petunia axillaris HOM05D005806 ORTHO05D007119 1.9e-92 344.0 537 48.4
AT3G16760 Arabidopsis thaliana HOM05D005806 ORTHO05D007119 3.6e-91 339.7 515 45.8
Nitab4.5_0002215g0010 Nicotiana tabacum HOM05D005806 ORTHO05D007119 3.6e-91 339.7 534 45.5
Eucgr.B01574 Eucalyptus grandis HOM05D005806 ORTHO05D007119 4.7e-91 339.3 535 52.7
Sp3g15010 Schrenkiella parvula HOM05D005806 ORTHO05D007119 8.0e-91 338.6 540 45.4
Aa31LG8G3830 Aethionema arabicum HOM05D005806 ORTHO05D007119 1.4e-90 337.8 540 44.4
Nn4g25745 Nelumbo nucifera HOM05D005806 ORTHO05D007119 1.4e-90 337.8 528 43.8
Glyma.07G244900 Glycine max HOM05D005806 ORTHO05D007119 2.3e-90 337.0 452 50.9
Thhalv10020624m.g Eutrema salsugineum HOM05D005806 ORTHO05D007119 3.1e-90 336.7 525 48.6
GSVIVG01035100001 Vitis vinifera HOM05D005806 ORTHO05D007119 3.1e-90 336.7 527 50.3
CAN.G14.19 Capsicum annuum HOM05D005806 ORTHO05D007119 1.5e-89 334.3 521 49.9
Carub.0003s1647 Capsella rubella HOM05D005806 ORTHO05D007119 5.8e-89 332.4 537 44.3
Nitab4.5_0012392g0010 Nicotiana tabacum HOM05D005806 ORTHO05D007119 2.9e-88 330.1 531 45.4
CsaV3_3G014910 Cucumis sativus L. HOM05D005806 ORTHO05D007119 4.9e-88 329.3 468 47.6
Lalb_Chr07g0182271 Lupinus albus HOM05D005806 ORTHO05D007119 4.1e-87 326.2 507 50.7
Ah.13g074780 Amaranthus hybridus HOM05D005806 ORTHO05D007119 5.4e-87 325.9 536 47.0
EL10Ac3g06659 Beta vulgaris HOM05D005806 ORTHO05D007119 7.0e-87 325.5 521 45.7
MBI18_g21793_MAGBIO Magnolia biondii HOM05D005806 ORTHO05D007119 9.2e-87 325.1 496 49.8
Sc13g0003160 Simmondsia chinensis HOM05D005806 ORTHO05D007119 2.7e-86 323.6 458 48.5
HanXRQChr03g0084151 Helianthus annuus HOM05D005806 ORTHO05D007119 4.6e-86 322.8 568 42.3
PSO832G4515 Papaver somniferum HOM05D005806 ORTHO05D007119 7.8e-86 322.0 451 52.5
Hund20516 Selenicereus undatus HOM05D005806 ORTHO05D007119 1.3e-85 321.2 519 44.5
Oeu054004.1 Olea europaea HOM05D005806 ORTHO05D007119 2.3e-85 320.5 501 49.9
VMungo1215G2854 Vigna mungo HOM05D005806 ORTHO05D007119 3.9e-85 319.7 446 49.8
Nn3g21558 Nelumbo nucifera HOM05D005806 ORTHO05D007119 5.0e-85 319.3 459 53.6
Phvul.003G107800 Phaseolus vulgaris HOM05D005806 ORTHO05D007119 8.6e-85 318.5 450 52.7
PSO210G6439 Papaver somniferum HOM05D005806 ORTHO05D007119 1.5e-84 317.8 451 52.1
Ca_21476_v3 Cicer arietinum L. HOM05D005806 ORTHO05D007119 2.5e-84 317.0 506 48.6
Glyma.17G028900 Glycine max HOM05D005806 ORTHO05D007119 5.6e-84 315.8 491 47.7
BraA01t03813Z Brassica rapa HOM05D005806 ORTHO05D007119 1.6e-83 314.3 507 47.1
TWI73G0620 Tripterygium wilfordii HOM05D005806 ORTHO05D007119 2.8e-83 313.5 478 47.3
BcaC09g48634 Brassica carinata HOM05D005806 ORTHO05D007119 3.6e-83 313.2 511 49.3
Migut.N00070 Erythranthe guttata HOM05D005806 ORTHO05D007119 4.7e-83 312.8 510 46.3
Gohir.A10G166900 Gossypium hirsutum HOM05D005806 ORTHO05D007119 2.3e-82 310.5 481 50.3
vmacro23238 Vaccinium macrocarpon HOM05D005806 ORTHO05D007119 2.3e-82 310.5 559 45.1
C01p47550 Brassica napus HOM05D005806 ORTHO05D007119 3.1e-82 310.1 517 45.5
Oeu006424.1 Olea europaea HOM05D005806 ORTHO05D007119 3.1e-82 310.1 517 51.6
BolC1t04724H Brassica oleracea HOM05D005806 ORTHO05D007119 4.0e-82 309.7 517 43.7
Cc03_g01460 Coffea canephora HOM05D005806 ORTHO05D007119 4.0e-82 309.7 535 42.2
SGA_v2.0_scaffold91G28032 Striga asiatica HOM05D005806 ORTHO05D007119 6.8e-82 308.9 517 46.4
Medtr4g120360 Medicago truncatula HOM05D005806 ORTHO05D007119 3.4e-81 306.6 501 46.1
PGR031G2493 Punica granatum HOM05D005806 ORTHO05D007119 5.8e-81 305.8 478 49.2
Lj4g0013254 Lotus japonicus HOM05D005806 ORTHO05D007119 4.9e-80 302.8 487 48.5
Actinidia40301 Actinidia chinensis HOM05D005806 ORTHO05D007119 3.2e-79 300.1 464 45.7
A01p37530 Brassica napus HOM05D005806 ORTHO05D007119 5.4e-79 299.3 510 46.5
SalBow5G0238 Salvia bowleyana HOM05D005806 ORTHO05D007119 4.3e-76 289.7 574 46.2
MSTRG.10119 Avicennia marina HOM05D005806 ORTHO05D007119 1.2e-73 281.6 485 50.5
ECA240G3979 Erigeron canadensis HOM05D005806 ORTHO05D007119 9.2e-71 271.9 432 45.4
HPP92_002231 Vanilla planifolia HOM05D005806 ORTHO05D007119 2.3e-69 267.3 472 42.6
Psat4g025560 Pisum sativum HOM05D005806 ORTHO05D007119 2.1e-67 260.8 450 43.1
SEGI_25850 Sequoiadendron giganteum HOM05D005806 ORTHO05D007119 1.7e-61 241.1 583 34.1
Os03g0340700 Oryza sativa ssp. japonica HOM05D005806 ORTHO05D007119 8.7e-61 238.8 470 40.9
CDE01G0725 Ceratophyllum demersum HOM05D005806 ORTHO05D007119 1.5e-60 238.0 488 42.2
TAR362G1179 Trochodendron aralioides HOM05D005806 ORTHO05D007119 2.5e-60 237.3 292 60.3
TAR633G1904 Trochodendron aralioides HOM05D005806 ORTHO05D007119 2.1e-59 234.2 292 51.0
CDE12G0749 Ceratophyllum demersum HOM05D005806 ORTHO05D007119 2.8e-59 233.8 529 38.8
arahy.Tifrunner.gnm1.ann1.T7VR84 Arachis hypogaea HOM05D005806 ORTHO05D007119 4.5e-57 226.5 283 51.2
Dinv29717 Davidia involucrata HOM05D005806 ORTHO05D007119 1.7e-56 224.6 289 57.1
AUR62015254 Chenopodium quinoa HOM05D005806 ORTHO05D007119 2.2e-56 224.2 285 49.5
Lalb_Chr13g0298181 Lupinus albus HOM05D005806 ORTHO05D007119 1.4e-55 221.5 444 41.2
Zm00001eb016320 Zea mays HOM05D005806 ORTHO05D007119 3.2e-55 220.3 521 39.9
MD13G1163500 Malus domestica HOM05D005806 ORTHO05D007119 2.0e-49 201.1 282 46.5
Rhsim04G0227400 Rhododendron simsii HOM05D005806 ORTHO05D007119 3.5e-46 190.3 274 46.4
HanXRQChr13g0413981 Helianthus annuus HOM05D005806 ORTHO05D007119 3.3e-44 183.7 146 67.1
unitig_699.g19987 Utricularia gibba HOM05D005806 ORTHO05D007119 1.6e-43 181.4 512 37.7
TAR633G1627 Trochodendron aralioides HOM05D005806 ORTHO05D007119 4.5e-41 173.3 190 56.8
AL3G29680 Arabidopsis lyrata HOM05D005806 ORTHO05D007119 1.7e-40 171.4 316 44.3
AUR62015253 Chenopodium quinoa HOM05D005806 ORTHO05D007119 2.5e-39 167.5 165 60.6
Dinv29718 Davidia involucrata HOM05D000037 ORTHO05D000150 4.6e-38 163.3 134 66.4
TAR362G0821 Trochodendron aralioides HOM05D005806 ORTHO05D007119 1.5e-33 148.3 158 55.1
SMO334G0099 Selaginella moellendorffii HOM05D005806 ORTHO05D007119 5.0e-32 143.3 194 45.4
AagrBONN_evm.TU.Sc2ySwM_228.3483 Anthoceros agrestis HOM05D005806 ORTHO05D007119 9.7e-28 129.0 200 51.0
CSS0010946 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 1.2e-25 122.1 73 82.2
CSS0023833 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 1.4e-23 115.2 73 79.5
Pp3c12_16600 Physcomitrium patens HOM05D005806 ORTHO05D007119 3.9e-21 107.1 415 29.4
FvH4_5g32480 Fragaria vesca HOM05D005806 ORTHO05D007119 1.3e-19 102.1 97 60.8
HPP92_002153 Vanilla planifolia HOM05D005806 ORTHO05D007119 1.8e-18 98.2 97 53.6
CBR_g4056 Chara braunii HOM05D005806 ORTHO05D007119 9.1e-18 95.9 120 45.0
SGA_v2.0_scaffold119G32699 Striga asiatica HOM05D005806 ORTHO05D007119 5.5e-15 86.7 72 65.3
Pp3c4_12130 Physcomitrium patens HOM05D005806 ORTHO05D007119 4.7e-14 83.6 403 28.0
CBR_g31779 Chara braunii HOM05D000019 ORTHO05D000002 2.3e-13 81.3 93 39.8
CBR_g39021 Chara braunii HOM05D000003 ORTHO05D000004 1.7e-11 75.1 90 36.7
Mapoly0005s0119 Marchantia polymorpha HOM05D005806 ORTHO05D007119 1.7e-11 75.1 560 22.1
Nn2g15616 Nelumbo nucifera HOM05D005806 ORTHO05D007119 4.7e-06 57.0 44 56.8


User provided reference genes

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