Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0113 Cannabis sativa HOM05D007802 ORTHO05D009879 4.1e-29 131.3 102 100.0
Dinv42589 Davidia involucrata HOM05D007802 ORTHO05D009879 2.4e-13 79.0 65 66.2
CiPaw.08G057300 Carya illinoinensis HOM05D007802 ORTHO05D009879 1.6e-12 76.3 65 64.6
QL09p018673 Quercus lobata HOM05D007802 ORTHO05D009879 4.6e-12 74.7 65 64.6
Eucgr.F00437 Eucalyptus grandis HOM05D007802 ORTHO05D009879 6.0e-12 74.3 69 60.9
CSS0046125 Camellia sinensis var. sinensis HOM05D007802 ORTHO05D009879 3.9e-11 71.6 62 61.3
Glyma.02G216200 Glycine max HOM05D007802 ORTHO05D009879 1.1e-10 70.1 67 59.7
Manes.18G057100 Manihot esculenta HOM05D007802 ORTHO05D009879 1.1e-10 70.1 65 60.0
Lalb_Chr17g0344631 Lupinus albus HOM05D007802 ORTHO05D009879 1.9e-10 69.3 67 62.7
Ca_05474_v3 Cicer arietinum L. HOM05D007802 ORTHO05D009879 2.5e-10 68.9 69 59.4
FvH4_4g29130 Fragaria vesca HOM05D007802 ORTHO05D009879 2.5e-10 68.9 72 55.6
FAN12G4209 Fragaria x ananassa HOM05D007802 ORTHO05D009879 2.5e-10 68.9 72 55.6
Psat2g064360 Pisum sativum HOM05D007802 ORTHO05D009879 2.5e-10 68.9 62 62.9
Medtr5g066760 Medicago truncatula HOM05D007802 ORTHO05D009879 3.3e-10 68.6 62 62.9
Nn5g29812 Nelumbo nucifera HOM05D007802 ORTHO05D009879 3.3e-10 68.6 63 55.6
TPR.G38823 Trifolium pratense HOM05D007802 ORTHO05D009879 4.3e-10 68.2 62 62.9
TAR628G0546 Trochodendron aralioides HOM05D007802 ORTHO05D009879 4.3e-10 68.2 64 60.9
MD08G1204900 Malus domestica HOM05D007802 ORTHO05D009879 5.6e-10 67.8 65 60.0
FvH4_5g34160 Fragaria vesca HOM05D007802 ORTHO05D009879 7.3e-10 67.4 66 57.6
Cfa013816 Carpinus fangiana HOM05D007802 ORTHO05D009879 9.5e-10 67.0 65 56.9
MD08G1204300 Malus domestica HOM05D007802 ORTHO05D009879 9.5e-10 67.0 63 58.7
Phvul.008G183400 Phaseolus vulgaris HOM05D007802 ORTHO05D009879 9.5e-10 67.0 67 55.2
Atru.chr13.972 Acer truncatum HOM05D007802 ORTHO05D009879 1.2e-09 66.6 65 56.9
arahy.Tifrunner.gnm1.ann1.6VNW8E Arachis hypogaea HOM05D007802 ORTHO05D009879 1.2e-09 66.6 67 58.2
Haze_22490 Corylus avellana HOM05D007802 ORTHO05D009879 1.6e-09 66.2 65 56.9
Prupe.1G536500 Prunus persica HOM05D007802 ORTHO05D009879 1.6e-09 66.2 65 58.5
Ciclev10002961m.g Citrus clementina HOM05D007802 ORTHO05D009879 2.1e-09 65.9 65 58.5
Sabra02G0086800 Salix brachista HOM05D007802 ORTHO05D009879 2.1e-09 65.9 65 60.0
THA.LOC104806901 Tarenaya hassleriana HOM05D007802 ORTHO05D009879 2.8e-09 65.5 62 59.7
GSVIVG01009214001 Vitis vinifera HOM05D007802 ORTHO05D009879 2.8e-09 65.5 65 55.4
DCAR_019323 Daucus carota HOM05D007802 ORTHO05D009879 3.6e-09 65.1 64 56.2
Cc10_g08360 Coffea canephora HOM05D007802 ORTHO05D009879 6.2e-09 64.3 65 55.4
RcHm_v2.0_Chr7g0233751 Rosa chinensis HOM05D007802 ORTHO05D009879 6.2e-09 64.3 67 55.2
Cpa.g.sc21.44 Carica papaya HOM05D007802 ORTHO05D009879 8.0e-09 63.9 63 58.7
Gohir.D05G220800 Gossypium hirsutum HOM05D007802 ORTHO05D009879 1.8e-08 62.8 67 56.7
Gorai.009G227900 Gossypium raimondii HOM05D007802 ORTHO05D009879 1.8e-08 62.8 67 56.7
Thecc.08G074100 Theobroma cacao HOM05D007802 ORTHO05D009879 1.8e-08 62.8 65 56.9
Sed0007651 Sechium edule HOM05D007802 ORTHO05D009879 2.3e-08 62.4 59 59.3
PGR042G2061 Punica granatum HOM05D007802 ORTHO05D009879 3.1e-08 62.0 68 54.4
A05p07580 Brassica napus HOM05D007802 ORTHO05D009879 4.0e-08 61.6 67 50.7
BcaB02g09173 Brassica carinata HOM05D007802 ORTHO05D009879 1.2e-07 60.1 67 50.7
C07p40270 Brassica napus HOM05D007802 ORTHO05D009879 1.2e-07 60.1 67 52.2
Carub.0004s2044 Capsella rubella HOM05D007802 ORTHO05D009879 1.2e-07 60.1 67 50.7
Rhsim07G0213800 Rhododendron simsii HOM05D007802 ORTHO05D009879 1.2e-07 60.1 65 52.3
BolC7t44562H Brassica oleracea HOM05D007802 ORTHO05D009879 1.5e-07 59.7 67 52.2
CARHR133150 Cardamine hirsuta HOM05D007802 ORTHO05D009879 1.5e-07 59.7 67 50.7
MELO3C011071.2 Cucumis melo HOM05D007802 ORTHO05D009879 1.5e-07 59.7 59 54.2
AL4G35740 Arabidopsis lyrata HOM05D007802 ORTHO05D009879 2.0e-07 59.3 67 50.7
TWI56G1155 Tripterygium wilfordii HOM05D007802 ORTHO05D009879 2.0e-07 59.3 65 53.8
FAN07G2104 Fragaria x ananassa HOM05D007802 ORTHO05D009879 3.4e-07 58.5 56 58.9
Oeu040885.1 Olea europaea HOM05D007802 ORTHO05D009879 3.4e-07 58.5 62 56.5
AT2G38465 Arabidopsis thaliana HOM05D007802 ORTHO05D009879 4.4e-07 58.2 67 49.3
Gohir.A05G216600 Gossypium hirsutum HOM05D007802 ORTHO05D009879 4.4e-07 58.2 59 57.6
BcaC02g11998 Brassica carinata HOM05D007802 ORTHO05D009879 5.8e-07 57.8 67 49.3
BolC4t22496H Brassica oleracea HOM05D007802 ORTHO05D009879 5.8e-07 57.8 67 49.3
BraA05t19725Z Brassica rapa HOM05D007802 ORTHO05D009879 5.8e-07 57.8 67 49.3
ClCG08G011540 Citrullus lanatus HOM05D007802 ORTHO05D009879 5.8e-07 57.8 61 52.5
Thhalv10017501m.g Eutrema salsugineum HOM05D007802 ORTHO05D009879 5.8e-07 57.8 67 46.3
BcaNung02098 Brassica carinata HOM05D007802 ORTHO05D009879 9.8e-07 57.0 67 50.7
C04p09060 Brassica napus HOM05D007802 ORTHO05D009879 1.3e-06 56.6 67 47.8
AUR62019113 Chenopodium quinoa HOM05D007802 ORTHO05D009879 1.3e-06 56.6 65 50.8
A04p29410 Brassica napus HOM05D007802 ORTHO05D009879 1.7e-06 56.2 67 49.3
HPP92_025782 Vanilla planifolia HOM05D007802 ORTHO05D009879 2.2e-06 55.8 70 48.6
SalBow7G0598 Salvia bowleyana HOM05D007802 ORTHO05D009879 4.9e-06 54.7 59 50.8
BcaB06g29053 Brassica carinata HOM05D007802 ORTHO05D009879 6.4e-06 54.3 67 44.8
AUR62014370 Chenopodium quinoa HOM05D007802 ORTHO05D009879 8.3e-06 53.9 65 49.2


User provided reference genes

Program Settings