Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 1.8e-66 255.8 126 100.0
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 1.0e-29 133.7 72 87.5
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.0e-29 133.7 72 87.5
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.0e-29 133.7 72 87.5
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.0e-29 133.7 72 87.5
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.1e-28 130.2 76 82.9
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 1.9e-28 129.4 72 87.5
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.5e-28 129.0 72 84.7
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 4.3e-28 128.3 71 87.3
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 5.6e-28 127.9 72 83.3
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 5.6e-28 127.9 72 84.7
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 7.3e-28 127.5 73 84.9
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 1.2e-27 126.7 72 81.9
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 1.2e-27 126.7 72 83.3
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 2.8e-27 125.6 73 79.5
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 3.6e-27 125.2 72 80.6
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 3.6e-27 125.2 72 80.6
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 3.6e-27 125.2 73 79.5
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 4.7e-27 124.8 72 83.3
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 1.1e-26 123.6 72 83.3
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 3.1e-26 122.1 72 84.7
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 3.1e-26 122.1 72 80.6
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 4.0e-26 121.7 100 65.0
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 5.2e-26 121.3 72 83.3
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 6.8e-26 120.9 78 76.9
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 1.2e-25 120.2 69 81.2
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 1.2e-25 120.2 72 81.9
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 1.2e-25 120.2 76 75.0
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 1.2e-25 120.2 76 75.0
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 1.5e-25 119.8 72 79.2
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 2.0e-25 119.4 72 80.6
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 2.6e-25 119.0 72 81.9
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 4.4e-25 118.2 70 75.7
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 5.8e-25 117.9 72 79.2
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 5.8e-25 117.9 72 77.8
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 7.6e-25 117.5 72 79.2
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 9.9e-25 117.1 72 79.2
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 9.9e-25 117.1 68 79.4
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 1.3e-24 116.7 72 77.8
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 1.3e-24 116.7 71 74.6
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 1.3e-24 116.7 72 77.8
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 2.2e-24 115.9 73 74.0
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 2.2e-24 115.9 72 80.6
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 2.9e-24 115.5 75 76.0
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 4.9e-24 114.8 70 75.7
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 6.4e-24 114.4 72 76.4
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 1.1e-23 113.6 68 76.5
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 1.1e-23 113.6 68 76.5
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 1.1e-23 113.6 70 70.0
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 1.1e-23 113.6 69 75.4
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 1.1e-23 113.6 72 75.0
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 1.4e-23 113.2 68 76.5
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 1.9e-23 112.8 74 74.3
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 1.9e-23 112.8 69 79.7
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 2.4e-23 112.5 69 75.4
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 2.4e-23 112.5 73 74.0
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 2.4e-23 112.5 72 73.6
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 2.4e-23 112.5 72 73.6
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 3.2e-23 112.1 72 73.6
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 4.2e-23 111.7 71 73.2
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 4.2e-23 111.7 69 75.4
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 5.4e-23 111.3 68 76.5
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 5.4e-23 111.3 68 76.5
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 5.4e-23 111.3 73 78.1
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 7.1e-23 110.9 73 72.6
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 1.2e-22 110.2 72 70.8
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 1.6e-22 109.8 72 73.6
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 2.7e-22 109.0 70 70.0
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 2.7e-22 109.0 70 70.0
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 3.5e-22 108.6 66 74.2
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 4.6e-22 108.2 70 71.4
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 6.0e-22 107.8 70 72.9
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 1.0e-21 107.1 72 69.4
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 1.0e-21 107.1 68 76.5
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 1.3e-21 106.7 72 69.4
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 1.7e-21 106.3 66 71.2
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 3.0e-21 105.5 69 75.4
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 5.1e-21 104.8 85 67.1
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 8.7e-21 104.0 71 76.1
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 1.1e-20 103.6 93 58.1
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 4.3e-20 101.7 72 72.2
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 5.6e-20 101.3 72 75.0
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 9.6e-20 100.5 59 76.3
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 4.8e-19 98.2 101 54.5
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 4.0e-18 95.1 131 45.8
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 5.3e-18 94.7 69 62.3
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 1.3e-16 90.1 72 66.7
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 1.3e-16 90.1 52 84.6
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 2.2e-16 89.4 61 68.9
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 4.9e-16 88.2 69 66.7
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 8.4e-16 87.4 50 82.0
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 1.4e-15 86.7 169 36.1
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 7.1e-15 84.3 137 40.1
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 4.6e-14 81.6 51 72.5
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 7.4e-12 74.3 39 84.6
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 1.6e-11 73.2 68 57.4
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 3.6e-11 72.0 42 81.0
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 4.8e-11 71.6 42 78.6
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 6.2e-11 71.2 42 81.0
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 1.1e-10 70.5 60 60.0
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 1.1e-10 70.5 52 61.5
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 1.4e-10 70.1 42 78.6
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 4.0e-10 68.6 42 78.6
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 5.3e-10 68.2 42 73.8
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 9.0e-10 67.4 41 78.0
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 3.4e-09 65.5 38 76.3
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 2.9e-08 62.4 40 75.0
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 2.9e-08 62.4 41 70.7
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 4.9e-08 61.6 41 68.3
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 4.2e-07 58.5 37 75.7
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 7.1e-07 57.8 42 59.5
Cpa.g.sc16.95 Carica papaya HOM05D006941 ORTHO05D008361 3.5e-06 55.5 31 80.6


User provided reference genes

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