Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0023 Cannabis sativa HOM05D009769 ORTHO05D010823 2.7e-258 894.8 451 100.0
CANSAT21G2496 Cannabis sativa HOM05D009769 ORTHO05D010823 1.2e-213 746.5 521 75.2
CANSAT25G0179 Cannabis sativa HOM05D009769 ORTHO05D010823 3.1e-105 386.3 222 87.8
CANSAT25G3518 Cannabis sativa HOM05D009769 ORTHO05D010823 8.1e-61 238.8 144 81.9
CANSAT80G1287 Cannabis sativa HOM05D009769 ORTHO05D010823 1.1e-52 211.8 157 70.7
CANSAT35G0470 Cannabis sativa HOM05D029669 ORTHO05D010823 2.4e-49 200.7 210 48.1
CANSAT54G2169 Cannabis sativa HOM05D009769 ORTHO05D010823 9.6e-38 162.2 399 33.1
CANSAT25G1172 Cannabis sativa HOM05D009769 ORTHO05D010823 7.4e-30 136.0 303 32.7
CANSAT78G0590 Cannabis sativa HOM05D009769 ORTHO05D000898 5.3e-28 129.8 216 38.4
CANSAT64G0311 Cannabis sativa HOM05D009769 ORTHO05D010823 5.7e-22 109.8 210 34.8
CANSAT54G2607 Cannabis sativa HOM05D029669 ORTHO05D010823 3.8e-18 97.1 71 57.7
FAN20G1880 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.4e-12 78.6 201 26.4
FAN27G1870 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.4e-12 77.8 201 26.4
FAN24G1944 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.1e-12 77.4 201 26.4
RcHm_v2.0_Chr6g0266671 Rosa chinensis HOM05D004096 ORTHO05D000898 4.1e-12 77.0 200 26.5
Atru.chr5.2180 Acer truncatum HOM05D004096 ORTHO05D000898 5.3e-12 76.6 201 26.9
FvH4_2g09911 Fragaria vesca HOM05D004096 ORTHO05D000898 9.0e-12 75.9 201 24.4
RcHm_v2.0_Chr6g0266661 Rosa chinensis HOM05D007993 ORTHO05D000898 1.5e-11 75.1 205 25.4
FAN06G1954 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.6e-11 74.3 184 25.5
CANSAT56G2685 Cannabis sativa HOM05D009769 ORTHO05D010823 1.3e-10 72.0 81 42.0
Atru.chr10.1446 Acer truncatum HOM05D004096 ORTHO05D000898 6.5e-10 69.7 196 25.0
FAN16G2434 Fragaria x ananassa HOM05D004096 ORTHO05D000898 8.5e-10 69.3 441 22.0
RcHm_v2.0_Chr2g0155601 Rosa chinensis HOM05D004096 ORTHO05D000898 1.2e-08 65.5 231 23.4
RcHm_v2.0_Chr6g0281911 Rosa chinensis HOM05D004096 ORTHO05D000898 1.2e-08 65.5 207 24.2
RcHm_v2.0_Chr1g0347831 Rosa chinensis HOM05D004096 ORTHO05D000898 2.1e-08 64.7 195 23.6
FAN12G1875 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.6e-08 63.9 211 21.8
CANSAT54G0051 Cannabis sativa HOM05D009769 ORTHO05D010823 6.1e-08 63.2 83 49.4
Dinv12671 Davidia involucrata HOM05D008396 ORTHO05D000898 1.8e-07 61.6 163 25.8
CANSAT64G2848 Cannabis sativa HOM05D014696 ORTHO05D010823 3.0e-07 60.8 99 29.3
Dinv17345 Davidia involucrata HOM05D008396 ORTHO05D000898 5.1e-07 60.1 148 27.7
Atru.chr1.1738 Acer truncatum HOM05D007651 ORTHO05D000898 1.1e-06 58.9 126 29.4
FAN18G0847 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.5e-06 58.5 207 21.3
Prupe.5G238300 Prunus persica HOM05D004096 ORTHO05D000898 1.5e-06 58.5 186 24.2
Ciclev10029867m.g Citrus clementina HOM05D007993 ORTHO05D000898 2.0e-06 58.2 104 30.8
FAN03G1966 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.0e-06 58.2 204 21.1
FAN05G1382 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.5e-06 57.8 263 22.8
FAN22G0991 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.5e-06 57.8 263 22.8
FAN25G0030 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.5e-06 57.8 263 22.8
CANSAT89G0008 Cannabis sativa HOM05D014696 ORTHO05D022147 4.3e-06 57.0 122 27.9
FvH4_7g31230 Fragaria vesca HOM05D000045 ORTHO05D000067 4.3e-06 57.0 280 20.4
RcHm_v2.0_Chr2g0155611 Rosa chinensis HOM05D010969 ORTHO05D015656 5.7e-06 56.6 235 22.6


User provided reference genes

Program Settings