Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT71G0010 Cannabis sativa HOM05D012483 ORTHO05D000880 3.2e-139 498.4 253 100.0
CANSAT80G0247 Cannabis sativa HOM05D012483 ORTHO05D000352 6.1e-82 308.1 256 66.0
CANSAT35G1177 Cannabis sativa HOM05D012483 ORTHO05D000352 6.7e-73 278.1 252 62.3
CANSAT56G0538 Cannabis sativa HOM05D012483 ORTHO05D000352 1.6e-66 256.9 280 54.3
CANSAT21G0361 Cannabis sativa HOM05D012483 ORTHO05D000352 1.8e-62 243.4 260 56.2
CANSAT35G0915 Cannabis sativa HOM05D012483 ORTHO05D000352 5.5e-59 231.9 252 56.3
CANSAT35G0088 Cannabis sativa HOM05D012483 ORTHO05D000352 4.0e-57 225.7 212 63.7
CANSAT54G2130 Cannabis sativa HOM05D012483 ORTHO05D000352 1.5e-56 223.8 259 54.4
CANSAT11G0771 Cannabis sativa HOM05D012483 ORTHO05D000352 3.1e-54 216.1 300 47.7
CANSAT80G0171 Cannabis sativa HOM05D012483 ORTHO05D000880 5.9e-53 211.8 123 85.4
CANSAT35G1950 Cannabis sativa HOM05D000429 ORTHO05D000352 4.0e-49 199.1 124 81.5
CANSAT78G0316 Cannabis sativa HOM05D000429 ORTHO05D000352 7.0e-46 188.3 104 89.4
CANSAT78G0921 Cannabis sativa HOM05D012483 ORTHO05D000880 9.2e-46 188.0 104 89.4
CANSAT11G1703 Cannabis sativa HOM05D012483 ORTHO05D000352 3.5e-45 186.0 208 55.8
CANSAT78G1657 Cannabis sativa HOM05D012483 ORTHO05D000352 7.0e-30 135.2 261 38.3
CANSAT54G0136 Cannabis sativa HOM05D000429 ORTHO05D000352 4.3e-27 125.9 81 81.5
CANSAT21G0172 Cannabis sativa HOM05D012483 ORTHO05D000352 6.8e-25 118.6 189 45.5
CANSAT54G0803 Cannabis sativa HOM05D008422 ORTHO05D000352 1.7e-20 104.0 252 31.3
CANSAT25G0395 Cannabis sativa HOM05D000429 ORTHO05D000352 8.6e-20 101.7 251 31.5
CANSAT78G2313 Cannabis sativa HOM05D000429 ORTHO05D000352 1.5e-19 100.9 68 82.4
CANSAT21G2110 Cannabis sativa HOM05D008422 ORTHO05D000352 1.8e-17 94.0 266 27.4
CANSAT54G2836 Cannabis sativa HOM05D000429 ORTHO05D000352 1.7e-15 87.4 245 29.8
CANSAT64G1284 Cannabis sativa HOM05D009938 ORTHO05D000880 4.9e-15 85.9 120 35.0
CANSAT80G0215 Cannabis sativa HOM05D008422 ORTHO05D000352 6.4e-15 85.5 47 85.1
CANSAT01G0191 Cannabis sativa HOM05D009938 ORTHO05D000880 1.1e-14 84.7 120 35.8
ECA232G1382 Erigeron canadensis HOM05D000429 ORTHO05D000880 1.1e-14 84.7 118 33.1
Oeu007675.1 Olea europaea HOM05D005901 ORTHO05D000880 1.9e-14 84.0 120 31.7
Oeu055455.1 Olea europaea HOM05D005901 ORTHO05D000880 2.4e-14 83.6 120 32.5
Oeu053585.1 Olea europaea HOM05D001436 ORTHO05D000880 4.1e-14 82.8 137 32.1
Oeu012288.1 Olea europaea HOM05D005901 ORTHO05D000880 5.4e-14 82.4 120 30.8
Oeu014576.1 Olea europaea HOM05D005901 ORTHO05D000880 5.4e-14 82.4 120 31.7
CANSAT25G2709 Cannabis sativa HOM05D009938 ORTHO05D000880 7.1e-14 82.0 266 25.9
CANSAT80G2143 Cannabis sativa HOM05D009938 ORTHO05D000880 7.1e-14 82.0 120 34.2
CANSAT35G1472 Cannabis sativa HOM05D009938 ORTHO05D000880 1.2e-13 81.3 120 33.3
Oeu022520.1 Olea europaea HOM05D005901 ORTHO05D000880 1.6e-13 80.9 120 31.7
CANSAT56G0797 Cannabis sativa HOM05D000429 ORTHO05D000352 2.1e-13 80.5 103 37.9
CANSAT64G0046 Cannabis sativa HOM05D008422 ORTHO05D000352 2.7e-13 80.1 260 24.2
TPR.G38533 Trifolium pratense HOM05D009653 ORTHO05D011212 6.0e-13 79.0 128 30.5
ECA238G3517 Erigeron canadensis HOM05D000047 ORTHO05D000044 7.8e-13 78.6 121 32.2
MBI18_g41471_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.3e-12 77.8 121 30.6
MBI19_g45780_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.7e-12 77.4 124 34.7
CANSAT25G1071 Cannabis sativa HOM05D008422 ORTHO05D000352 2.3e-12 77.0 120 32.5
Oeu035291.1 Olea europaea HOM05D001436 ORTHO05D000880 3.9e-12 76.3 105 35.2
CSS0022880 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 5.1e-12 75.9 122 30.3
CANSAT01G2084 Cannabis sativa HOM05D009938 ORTHO05D000880 5.1e-12 75.9 248 25.0
DCAR_031974 Daucus carota HOM05D000429 ORTHO05D000352 5.1e-12 75.9 252 27.4
ECA240G2638 Erigeron canadensis HOM05D000047 ORTHO05D000044 6.6e-12 75.5 121 31.4
CSS0029770 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 8.7e-12 75.1 122 30.3
CANSAT64G2626 Cannabis sativa HOM05D008422 ORTHO05D000352 8.7e-12 75.1 107 35.5
Manes.18G025086 Manihot esculenta HOM05D000429 ORTHO05D000880 8.7e-12 75.1 122 30.3
MBI11_g00240_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.1e-11 74.7 124 33.9
CANSAT01G1774 Cannabis sativa HOM05D008422 ORTHO05D000352 2.5e-11 73.6 241 29.5
CANSAT25G1487 Cannabis sativa HOM05D000429 ORTHO05D000352 2.5e-11 73.6 40 82.5
Manes.18G056202 Manihot esculenta HOM05D000429 ORTHO05D000880 4.3e-11 72.8 122 31.1
CANSAT35G0387 Cannabis sativa HOM05D009938 ORTHO05D000880 5.6e-11 72.4 248 26.6
CSS0002549 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 7.3e-11 72.0 122 30.3
CANSAT11G0599 Cannabis sativa HOM05D000429 ORTHO05D000352 7.3e-11 72.0 247 27.1
ECA247G2089 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.2e-10 71.2 136 30.9
MBI07_g06422_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.2e-10 71.2 251 25.9
CANSAT54G2906 Cannabis sativa HOM05D008422 ORTHO05D000352 1.6e-10 70.9 258 25.2
CANSAT01G0535 Cannabis sativa HOM05D008422 ORTHO05D000352 2.1e-10 70.5 217 30.9
CANSAT11G1685 Cannabis sativa HOM05D009938 ORTHO05D000880 2.1e-10 70.5 233 25.3
ECA238G4817 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.1e-10 70.5 132 29.5
ECA240G2546 Erigeron canadensis HOM05D003069 ORTHO05D002578 2.1e-10 70.5 136 31.6
ECA247G3761 Erigeron canadensis HOM05D003069 ORTHO05D002578 2.8e-10 70.1 136 30.9
MBI15_g11945_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 2.8e-10 70.1 119 30.3
CANSAT80G0151 Cannabis sativa HOM05D009938 ORTHO05D000880 3.6e-10 69.7 265 26.0
Oeu012009.1 Olea europaea HOM05D005901 ORTHO05D000880 6.2e-10 68.9 103 32.0
ECA240G4278 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.1e-09 68.2 131 28.2
Manes.02G203175 Manihot esculenta HOM05D000429 ORTHO05D000352 1.1e-09 68.2 122 27.9
ECA240G0821 Erigeron canadensis HOM05D003069 ORTHO05D002578 1.4e-09 67.8 130 28.5
ECA246G4146 Erigeron canadensis HOM05D003069 ORTHO05D002578 1.4e-09 67.8 127 27.6
TPR.G30696 Trifolium pratense HOM05D000429 ORTHO05D000880 1.4e-09 67.8 121 28.1
VMungo0251G1574 Vigna mungo HOM05D004090 ORTHO05D000880 1.4e-09 67.8 117 35.9
CANSAT56G1739 Cannabis sativa HOM05D009938 ORTHO05D000880 1.8e-09 67.4 123 30.1
ECA240G3470 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.8e-09 67.4 134 32.1
ECA246G3005 Erigeron canadensis HOM05D003069 ORTHO05D002578 1.8e-09 67.4 136 30.9
HanXRQChr13g0387201 Helianthus annuus HOM05D000047 ORTHO05D000044 1.8e-09 67.4 136 32.4
VMungo0540G1972 Vigna mungo HOM05D008322 ORTHO05D000880 1.8e-09 67.4 139 29.5
ECA234G0304 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.4e-09 67.0 130 28.5
ECA236G3805 Erigeron canadensis HOM05D000006 ORTHO05D000352 2.4e-09 67.0 134 32.1
VMungo1127G1971 Vigna mungo HOM05D008322 ORTHO05D000880 2.4e-09 67.0 118 31.4
CANSAT64G2525 Cannabis sativa HOM05D009938 ORTHO05D000880 3.1e-09 66.6 127 28.3
CANSAT01G0047 Cannabis sativa HOM05D008422 ORTHO05D000352 4.0e-09 66.2 226 27.9
CANSAT21G0584 Cannabis sativa HOM05D009938 ORTHO05D000880 4.0e-09 66.2 103 34.0
ECA232G4948 Erigeron canadensis HOM05D003069 ORTHO05D002578 4.0e-09 66.2 131 27.5
ECA247G2502 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.0e-09 66.2 134 32.1
CANSAT25G2094 Cannabis sativa HOM05D040811 ORTHO05D000880 5.2e-09 65.9 103 31.1
CANSAT80G1559 Cannabis sativa HOM05D008422 ORTHO05D000352 5.2e-09 65.9 258 26.4
ECA240G1209 Erigeron canadensis HOM05D000047 ORTHO05D000044 5.2e-09 65.9 130 26.9
ECA246G0488 Erigeron canadensis HOM05D000047 ORTHO05D000044 5.2e-09 65.9 134 32.1
Lj5g0013972 Lotus japonicus HOM05D000429 ORTHO05D002578 5.2e-09 65.9 115 32.2
VMungo0251G0875 Vigna mungo HOM05D008322 ORTHO05D000880 5.2e-09 65.9 99 35.4
VMungo0720G1635 Vigna mungo HOM05D008322 ORTHO05D000880 6.9e-09 65.5 101 33.7
ECA247G4109 Erigeron canadensis HOM05D000047 ORTHO05D000044 9.0e-09 65.1 136 30.1
MBI16_g25487_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 9.0e-09 65.1 107 29.0
MBI16_g26216_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 9.0e-09 65.1 144 29.2
ECA233G3535 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.2e-08 64.7 131 26.7
ECA233G5499 Erigeron canadensis HOM05D000006 ORTHO05D000352 1.2e-08 64.7 134 31.3
VMungo0331G0341 Vigna mungo HOM05D000429 ORTHO05D002449 1.2e-08 64.7 147 29.3
arahy.Tifrunner.gnm1.ann1.99K3J2 Arachis hypogaea HOM05D000047 ORTHO05D000044 1.5e-08 64.3 127 29.1
CANSAT11G1756 Cannabis sativa HOM05D009938 ORTHO05D000880 1.5e-08 64.3 103 31.1
Lj3g0010754 Lotus japonicus HOM05D000429 ORTHO05D000880 1.5e-08 64.3 115 31.3
MBI01_g07127_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.5e-08 64.3 124 29.8
MBI12_g41553_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 2.0e-08 63.9 124 28.2
ECA232G3051 Erigeron canadensis HOM05D001690 ORTHO05D002627 2.6e-08 63.5 100 32.0
Manes.14G150022 Manihot esculenta HOM05D000429 ORTHO05D000880 2.6e-08 63.5 255 23.1
TWI38G0384 Tripterygium wilfordii HOM05D000429 ORTHO05D000880 2.6e-08 63.5 108 36.1
CANSAT01G3249 Cannabis sativa HOM05D000017 ORTHO05D000013 3.4e-08 63.2 48 54.2
ECA240G3315 Erigeron canadensis HOM05D000033 ORTHO05D001317 3.4e-08 63.2 100 29.0
MBI06_g07517_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 3.4e-08 63.2 126 28.6
ECA232G1836 Erigeron canadensis HOM05D000429 ORTHO05D000352 4.4e-08 62.8 130 30.8
ECA233G1472 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.4e-08 62.8 130 27.7
ECA234G1786 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.4e-08 62.8 131 26.7
ECA236G1050 Erigeron canadensis HOM05D000429 ORTHO05D000352 4.4e-08 62.8 134 31.3
CANSAT21G1066 Cannabis sativa HOM05D009938 ORTHO05D000880 5.8e-08 62.4 246 24.4
ECA097G0001 Erigeron canadensis HOM05D000047 ORTHO05D000044 5.8e-08 62.4 134 30.6
ECA232G1596 Erigeron canadensis HOM05D000429 ORTHO05D000352 5.8e-08 62.4 134 30.6
ECA247G3028 Erigeron canadensis HOM05D003069 ORTHO05D002578 5.8e-08 62.4 130 24.6
MBI08_g12261_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 5.8e-08 62.4 116 28.4
Manes.10G076111 Manihot esculenta HOM05D000047 ORTHO05D000352 5.8e-08 62.4 102 31.4
EL10Ac2g02650 Beta vulgaris HOM05D000429 ORTHO05D000880 7.6e-08 62.0 130 26.9
EL10Ac4g08314 Beta vulgaris HOM05D000429 ORTHO05D000880 7.6e-08 62.0 130 26.9
EL10Ac9g22487 Beta vulgaris HOM05D000429 ORTHO05D000880 9.9e-08 61.6 130 26.9
Sopen08g007090 Solanum pennellii HOM05D000047 ORTHO05D001383 9.9e-08 61.6 138 26.1
ECA238G2097 Erigeron canadensis HOM05D003069 ORTHO05D002578 1.3e-07 61.2 117 29.9
PSO675G1134 Papaver somniferum HOM05D009926 ORTHO05D002449 1.3e-07 61.2 107 30.8
arahy.Tifrunner.gnm1.ann1.UC2LFY Arachis hypogaea HOM05D000429 ORTHO05D000352 1.7e-07 60.8 127 28.3
EL10Ac3g07041 Beta vulgaris HOM05D000429 ORTHO05D000880 2.2e-07 60.5 130 26.2
CANSAT11G1142 Cannabis sativa HOM05D008422 ORTHO05D000352 2.2e-07 60.5 213 25.8
CANSAT80G2507 Cannabis sativa HOM05D008422 ORTHO05D000352 2.2e-07 60.5 246 27.6
ECA246G2481 Erigeron canadensis HOM05D000429 ORTHO05D000352 2.2e-07 60.5 134 29.9
arahy.Tifrunner.gnm1.ann1.2GNH2V Arachis hypogaea HOM05D000429 ORTHO05D000880 2.9e-07 60.1 153 25.5
CANSAT21G0196 Cannabis sativa HOM05D000429 ORTHO05D000880 2.9e-07 60.1 132 31.8
MBI05_g04444_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 2.9e-07 60.1 108 29.6
PSO832G0268 Papaver somniferum HOM05D009926 ORTHO05D002449 2.9e-07 60.1 140 30.7
QL10p000322 Quercus lobata HOM05D000429 ORTHO05D002449 2.9e-07 60.1 120 26.7
Ah.01g005090 Amaranthus hybridus HOM05D009930 ORTHO05D012156 3.8e-07 59.7 120 25.8
EL10Ac6g14450 Beta vulgaris HOM05D000429 ORTHO05D000880 4.9e-07 59.3 130 26.2
ECA234G3473 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.9e-07 59.3 226 27.9
CANSAT01G1361 Cannabis sativa HOM05D000429 ORTHO05D000352 6.4e-07 58.9 212 27.4
MBI03_g16543_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 6.4e-07 58.9 109 29.4
VMungo0251G1616 Vigna mungo HOM05D008322 ORTHO05D000880 6.4e-07 58.9 87 32.2
CANSAT11G2221 Cannabis sativa HOM05D009938 ORTHO05D000880 8.4e-07 58.5 196 25.5
vmacro05736 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 8.4e-07 58.5 127 24.4
VMungo0464G1335 Vigna mungo HOM05D008322 ORTHO05D000880 8.4e-07 58.5 89 32.6
ECA246G1565 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.1e-06 58.2 199 26.6
MBI08_g21303_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.1e-06 58.2 104 31.7
EL10As9g23929 Beta vulgaris HOM05D000429 ORTHO05D000880 1.4e-06 57.8 126 25.4
CANSAT78G0676 Cannabis sativa HOM05D008422 ORTHO05D000352 1.4e-06 57.8 103 31.1
PSO170G2292 Papaver somniferum HOM05D000014 ORTHO05D000016 1.4e-06 57.8 112 31.2
Hund15656 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.4e-06 57.8 121 25.6
COL.COLO4_08247 Corchorus olitorius HOM05D000047 ORTHO05D000589 2.4e-06 57.0 142 25.4
QL05p030578 Quercus lobata HOM05D000047 ORTHO05D000044 2.4e-06 57.0 120 25.0
VMungo1127G1609 Vigna mungo HOM05D008322 ORTHO05D000880 2.4e-06 57.0 72 36.1
ECA232G0020 Erigeron canadensis HOM05D001690 ORTHO05D002578 3.2e-06 56.6 137 27.0
MBI09_g18084_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 3.2e-06 56.6 157 27.4
PSO063G2016 Papaver somniferum HOM05D009926 ORTHO05D002449 3.2e-06 56.6 107 29.9
PSO782G2329 Papaver somniferum HOM05D000014 ORTHO05D000016 3.2e-06 56.6 98 31.6
Hund00874 Selenicereus undatus HOM05D000047 ORTHO05D001383 3.2e-06 56.6 94 29.8
arahy.Tifrunner.gnm1.ann1.6EH8Q5 Arachis hypogaea HOM05D000429 ORTHO05D000880 4.2e-06 56.2 127 24.4
COL.COLO4_36020 Corchorus olitorius HOM05D000047 ORTHO05D000589 4.2e-06 56.2 142 25.4
FvH4_3g17101 Fragaria vesca HOM05D000429 ORTHO05D000352 4.2e-06 56.2 230 25.2
ECA246G1600 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.4e-06 55.8 240 24.2
FvH4_6g11892 Fragaria vesca HOM05D000429 ORTHO05D000880 5.4e-06 55.8 141 26.2
HanXRQChr02g0044181 Helianthus annuus HOM05D003069 ORTHO05D002578 5.4e-06 55.8 248 23.0
PSO017G4594 Papaver somniferum HOM05D000014 ORTHO05D000016 5.4e-06 55.8 98 31.6
MBI14_g08687_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 9.3e-06 55.1 73 31.5
PSO339G5796 Papaver somniferum HOM05D000014 ORTHO05D000016 9.3e-06 55.1 98 31.6
TWI18G1427 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 9.3e-06 55.1 99 32.3


User provided reference genes

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