Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G3019 Cannabis sativa HOM05D008058 ORTHO05D001269 1.7e-69 265.8 126 100.0
CANSAT54G1186 Cannabis sativa HOM05D008058 ORTHO05D001269 1.6e-67 259.2 123 98.4
CANSAT56G3292 Cannabis sativa HOM05D008058 ORTHO05D010564 3.6e-67 258.1 123 98.4
CANSAT01G1802 Cannabis sativa HOM05D008058 ORTHO05D001269 1.1e-52 209.9 99 100.0
CANSAT01G0062 Cannabis sativa HOM05D008058 ORTHO05D001269 2.5e-36 155.6 123 69.9
CANSAT54G1962 Cannabis sativa HOM05D009344 ORTHO05D001269 7.8e-30 134.0 133 51.1
CANSAT56G0271 Cannabis sativa HOM05D009344 ORTHO05D001269 2.3e-29 132.5 133 50.4
CANSAT21G0863 Cannabis sativa HOM05D008058 ORTHO05D001269 1.1e-28 130.2 136 49.3
CANSAT21G1491 Cannabis sativa HOM05D001081 ORTHO05D001269 2.1e-27 125.9 124 50.0
ATR0204G001 Amborella trichopoda HOM05D008058 ORTHO05D010564 2.2e-24 115.9 124 46.8
CANSAT25G0604 Cannabis sativa HOM05D008058 ORTHO05D001269 2.2e-24 115.9 124 46.8
CANSAT54G2191 Cannabis sativa HOM05D008058 ORTHO05D001269 5.4e-23 111.3 124 44.4
CANSAT11G2391 Cannabis sativa HOM05D009344 ORTHO05D001269 1.0e-21 107.1 103 53.4
CANSAT78G1108 Cannabis sativa HOM05D008058 ORTHO05D001269 2.3e-21 105.9 108 52.8
CANSAT56G0432 Cannabis sativa HOM05D008058 ORTHO05D001269 8.7e-21 104.0 92 55.4
CANSAT78G1523 Cannabis sativa HOM05D008058 ORTHO05D001269 8.1e-19 97.4 71 62.0
CANSAT56G1132 Cannabis sativa HOM05D009344 ORTHO05D001269 6.9e-18 94.4 124 40.3
CANSAT56G2211 Cannabis sativa HOM05D009344 ORTHO05D001269 9.0e-18 94.0 124 40.3
CANSAT78G1060 Cannabis sativa HOM05D009344 ORTHO05D001269 1.5e-17 93.2 124 39.5
CANSAT01G2795 Cannabis sativa HOM05D009344 ORTHO05D001269 2.6e-17 92.4 124 39.5
CANSAT01G2151 Cannabis sativa HOM05D009344 ORTHO05D001269 4.9e-16 88.2 124 36.3
CANSAT35G0168 Cannabis sativa HOM05D009344 ORTHO05D001269 9.3e-15 84.0 125 38.4
CANSAT64G0575 Cannabis sativa HOM05D008058 ORTHO05D001269 1.2e-14 83.6 100 45.0
CANSAT80G1293 Cannabis sativa HOM05D008058 ORTHO05D001269 1.2e-14 83.6 100 45.0
CANSAT01G3260 Cannabis sativa HOM05D009344 ORTHO05D001269 2.7e-14 82.4 61 59.0
CANSAT92G0002 Cannabis sativa HOM05D009344 ORTHO05D001269 1.3e-13 80.1 94 43.6
CANSAT35G1833 Cannabis sativa HOM05D009344 ORTHO05D001269 1.1e-12 77.0 91 42.9
CANSAT25G1481 Cannabis sativa HOM05D009344 ORTHO05D001269 2.8e-11 72.4 75 48.0
CANSAT78G0737 Cannabis sativa HOM05D008058 ORTHO05D001269 3.6e-11 72.0 75 49.3
Thhalv10022509m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 6.4e-08 61.2 122 30.3
SGA_v2.0_scaffold91G28036 Striga asiatica HOM05D008585 ORTHO05D000397 1.9e-07 59.7 123 28.5
CANSAT01G0119 Cannabis sativa HOM05D007816 ORTHO05D000482 2.4e-07 59.3 102 30.4
TWI18G0429 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.2e-07 58.9 98 32.7
SGA_v2.0_scaffold273G46471 Striga asiatica HOM05D008585 ORTHO05D000397 4.2e-07 58.5 124 30.6
TWI75G0551 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 4.2e-07 58.5 94 34.0
Ciclev10017905m.g Citrus clementina HOM05D007816 ORTHO05D000482 7.1e-07 57.8 92 31.5
TWI36G1743 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 7.1e-07 57.8 98 31.6
C05p32520 Brassica napus HOM05D000471 ORTHO05D000199 1.2e-06 57.0 123 30.9
SGA_v2.0_scaffold65G22152 Striga asiatica HOM05D008585 ORTHO05D000397 1.6e-06 56.6 124 31.5
TWI18G0558 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.6e-06 56.6 98 31.6
TWI53G0735 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.6e-06 56.6 98 31.6
TWI63G0551 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.6e-06 56.6 98 31.6
TWI77G0416 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 1.6e-06 56.6 115 31.3
TWI79G1717 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.6e-06 56.6 98 31.6
A09p19790 Brassica napus HOM05D000471 ORTHO05D000199 2.1e-06 56.2 123 30.9
TWI32G0457 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.1e-06 56.2 98 31.6
TWI38G1257 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.1e-06 56.2 98 31.6
CANSAT80G2675 Cannabis sativa HOM05D002262 ORTHO05D000482 3.5e-06 55.5 98 28.6
TWI77G0435 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 4.6e-06 55.1 94 34.0
BolC5t32942H Brassica oleracea HOM05D000471 ORTHO05D000199 6.0e-06 54.7 94 34.0
Oeu029820.1 Olea europaea HOM05D008585 ORTHO05D000397 6.0e-06 54.7 89 31.5
Oeu044756.1 Olea europaea HOM05D007816 ORTHO05D000397 6.0e-06 54.7 109 28.4
SGA_v2.0_scaffold491G52433 Striga asiatica HOM05D008585 ORTHO05D000397 6.0e-06 54.7 89 34.8
BraSC36t46070Z Brassica rapa HOM05D000471 ORTHO05D000199 7.9e-06 54.3 100 34.0
CsaV3_5G001270 Cucumis sativus L. HOM05D012996 ORTHO05D000482 7.9e-06 54.3 96 34.4


User provided reference genes

Program Settings