Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2972 Cannabis sativa HOM05D008058 ORTHO05D010564 4.9e-113 411.0 186 100.0
CANSAT21G2086 Cannabis sativa HOM05D008058 ORTHO05D010564 2.4e-104 382.1 186 91.9
CANSAT25G2931 Cannabis sativa HOM05D008058 ORTHO05D010564 3.3e-101 371.7 186 89.8
CANSAT56G2017 Cannabis sativa HOM05D008058 ORTHO05D010564 3.3e-93 345.1 172 90.1
CANSAT64G2472 Cannabis sativa HOM05D008058 ORTHO05D010564 1.4e-88 329.7 175 85.1
CANSAT25G3676 Cannabis sativa HOM05D008058 ORTHO05D010564 4.5e-74 281.6 134 94.0
CANSAT80G0885 Cannabis sativa HOM05D008058 ORTHO05D010564 3.8e-65 251.9 123 93.5
CANSAT25G0360 Cannabis sativa HOM05D008058 ORTHO05D010564 3.7e-60 235.3 108 96.3
CANSAT01G0635 Cannabis sativa HOM05D008058 ORTHO05D010564 2.2e-52 209.5 104 93.3
CANSAT35G0551 Cannabis sativa HOM05D008058 ORTHO05D010564 3.7e-52 208.8 104 92.3
CANSAT78G2366 Cannabis sativa HOM05D008058 ORTHO05D010564 1.8e-51 206.5 104 91.3
CANSAT21G1982 Cannabis sativa HOM05D008058 ORTHO05D010564 1.4e-48 196.8 95 90.5
CANSAT11G0773 Cannabis sativa HOM05D008058 ORTHO05D010564 4.7e-47 191.8 90 88.9
CANSAT56G2831 Cannabis sativa HOM05D008058 ORTHO05D010564 4.7e-47 191.8 88 92.0
CANSAT56G3729 Cannabis sativa HOM05D008058 ORTHO05D010564 1.8e-43 179.9 179 43.6
CANSAT25G3402 Cannabis sativa HOM05D008058 ORTHO05D010564 5.9e-42 174.9 182 41.8
CANSAT64G2290 Cannabis sativa HOM05D008058 ORTHO05D010564 1.0e-41 174.1 180 43.9
CANSAT56G1475 Cannabis sativa HOM05D008058 ORTHO05D010564 1.7e-41 173.3 179 43.6
CANSAT64G1644 Cannabis sativa HOM05D008058 ORTHO05D010564 2.2e-41 172.9 179 41.3
CANSAT21G1969 Cannabis sativa HOM05D008058 ORTHO05D010564 1.9e-40 169.9 179 41.9
CANSAT56G1868 Cannabis sativa HOM05D008058 ORTHO05D010564 8.8e-38 161.0 180 40.6
CANSAT56G0610 Cannabis sativa HOM05D008058 ORTHO05D010564 1.2e-37 160.6 77 89.6
CANSAT78G1148 Cannabis sativa HOM05D008058 ORTHO05D010564 3.7e-36 155.6 175 41.7
CANSAT56G1907 Cannabis sativa HOM05D008058 ORTHO05D010564 1.4e-35 153.7 175 40.0
CANSAT64G1886 Cannabis sativa HOM05D008058 ORTHO05D010564 4.2e-32 142.1 151 39.7
CANSAT78G1561 Cannabis sativa HOM05D008058 ORTHO05D010564 1.2e-31 140.6 105 66.7
CANSAT64G0678 Cannabis sativa HOM05D008058 ORTHO05D010564 1.5e-29 133.7 183 36.6
CANSAT01G1382 Cannabis sativa HOM05D008058 ORTHO05D010564 2.7e-26 122.9 140 41.4
CANSAT21G1560 Cannabis sativa HOM05D008058 ORTHO05D010564 7.7e-26 121.3 187 34.2
CANSAT78G0252 Cannabis sativa HOM05D008058 ORTHO05D010564 1.0e-25 120.9 53 94.3
CANSAT56G1076 Cannabis sativa HOM05D008058 ORTHO05D010564 1.7e-25 120.2 121 43.8
CANSAT01G1756 Cannabis sativa HOM05D008058 ORTHO05D010564 4.0e-22 109.0 183 31.7
CANSAT01G2125 Cannabis sativa HOM05D008058 ORTHO05D010564 4.0e-22 109.0 96 50.0
CANSAT21G1495 Cannabis sativa HOM05D008058 ORTHO05D010564 5.4e-19 98.6 147 33.3
CANSAT35G1653 Cannabis sativa HOM05D008058 ORTHO05D010564 1.2e-18 97.4 141 34.8
CANSAT56G3134 Cannabis sativa HOM05D008058 ORTHO05D010564 3.5e-18 95.9 182 31.3
CANSAT80G0349 Cannabis sativa HOM05D008058 ORTHO05D010564 3.5e-18 95.9 183 31.1
RcHm_v2.0_Chr2g0104761 Rosa chinensis HOM05D000529 ORTHO05D000472 2.3e-14 83.2 179 26.8
CANSAT25G0774 Cannabis sativa HOM05D008058 ORTHO05D010564 5.2e-14 82.0 110 32.7
CANSAT64G2753 Cannabis sativa HOM05D008058 ORTHO05D010564 3.4e-13 79.3 38 78.9
CANSAT64G0708 Cannabis sativa HOM05D008058 ORTHO05D010564 5.8e-13 78.6 101 32.7
CANSAT01G1620 Cannabis sativa HOM05D008058 ORTHO05D010564 9.8e-13 77.8 111 34.2
CANSAT25G1105 Cannabis sativa HOM05D008058 ORTHO05D010564 2.2e-12 76.6 146 30.8
CANSAT54G2324 Cannabis sativa HOM05D008058 ORTHO05D010564 3.7e-12 75.9 90 36.7
FvH4_1g15500 Fragaria vesca HOM05D000529 ORTHO05D000472 5.4e-11 72.0 153 26.8
Thhalv10005449m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.6e-10 70.5 146 22.6
CANSAT54G1091 Cannabis sativa HOM05D008058 ORTHO05D010564 3.5e-10 69.3 136 29.4
ATR0204G001 Amborella trichopoda HOM05D008058 ORTHO05D010564 6.0e-10 68.6 31 87.1
Thhalv10015694m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 7.8e-10 68.2 187 26.7
Thhalv10002270m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 8.6e-09 64.7 168 21.4
Oeu012308.1 Olea europaea HOM05D000700 ORTHO05D000397 1.5e-08 63.9 164 26.2
PGSC0003DMG400019847 Solanum tuberosum HOM05D007732 ORTHO05D010105 1.9e-08 63.5 139 26.6
Carub.0027s0004 Capsella rubella HOM05D001285 ORTHO05D000199 3.3e-08 62.8 170 23.5
Oeu036186.1 Olea europaea HOM05D000700 ORTHO05D000397 4.3e-08 62.4 161 26.1
Oeu020632.1 Olea europaea HOM05D000700 ORTHO05D000397 7.3e-08 61.6 165 25.5
Oeu025257.1 Olea europaea HOM05D000700 ORTHO05D000397 7.3e-08 61.6 164 25.6
Oeu046505.1 Olea europaea HOM05D000700 ORTHO05D000397 9.5e-08 61.2 164 25.6
Sopen02g001690 Solanum pennellii HOM05D007732 ORTHO05D010105 1.2e-07 60.8 149 27.5
Sopen07g008740 Solanum pennellii HOM05D007732 ORTHO05D010105 1.2e-07 60.8 141 26.2
Oeu034454.1 Olea europaea HOM05D000700 ORTHO05D000397 2.1e-07 60.1 164 24.4
C01p48530 Brassica napus HOM05D001285 ORTHO05D000199 2.8e-07 59.7 121 28.1
Oeu015595.1 Olea europaea HOM05D000700 ORTHO05D000397 2.8e-07 59.7 164 25.0
Oeu061925.1 Olea europaea HOM05D008641 ORTHO05D000397 2.8e-07 59.7 173 20.8
Oeu009393.1 Olea europaea HOM05D009665 ORTHO05D011335 3.6e-07 59.3 171 22.2
Oeu064242.1 Olea europaea HOM05D000700 ORTHO05D000397 3.6e-07 59.3 164 25.0
Sopen05g019150 Solanum pennellii HOM05D007732 ORTHO05D010105 6.2e-07 58.5 151 25.8
Thhalv10011096m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 8.0e-07 58.2 169 23.1
Oeu045257.1 Olea europaea HOM05D000700 ORTHO05D000397 8.0e-07 58.2 169 23.7
Thhalv10015990m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.4e-06 57.4 169 19.5
Thhalv10029511m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.4e-06 57.4 169 19.5
Oeu044521.1 Olea europaea HOM05D000700 ORTHO05D000397 1.4e-06 57.4 164 24.4
BcaC06g30937 Brassica carinata HOM05D001285 ORTHO05D000199 2.3e-06 56.6 145 24.1
BcaC07g41747 Brassica carinata HOM05D001285 ORTHO05D000199 2.3e-06 56.6 149 21.5
Thhalv10023182m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.3e-06 56.6 169 18.9
Oeu021150.1 Olea europaea HOM05D000700 ORTHO05D000397 2.3e-06 56.6 164 24.4
BcaB03g15573 Brassica carinata HOM05D001285 ORTHO05D000199 3.1e-06 56.2 145 24.1
BraA07t28518Z Brassica rapa HOM05D001285 ORTHO05D000199 3.1e-06 56.2 165 20.6
Oeu019371.1 Olea europaea HOM05D000700 ORTHO05D000397 3.1e-06 56.2 131 26.7
Carub.0006s2832 Capsella rubella HOM05D001285 ORTHO05D000199 4.0e-06 55.8 133 26.3
A02p26990 Brassica napus HOM05D001285 ORTHO05D000199 5.2e-06 55.5 139 28.1
Thhalv10003114m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 5.2e-06 55.5 169 18.9
BcaC03g17530 Brassica carinata HOM05D000675 ORTHO05D003044 6.8e-06 55.1 131 25.2
BcaC04g20925 Brassica carinata HOM05D001285 ORTHO05D000199 6.8e-06 55.1 149 21.5
C02p54980 Brassica napus HOM05D000675 ORTHO05D003044 6.8e-06 55.1 131 25.2
BraA03t11415Z Brassica rapa HOM05D001285 ORTHO05D000199 6.8e-06 55.1 149 21.5
BolC2t07252H Brassica oleracea HOM05D001285 ORTHO05D000199 8.9e-06 54.7 149 21.5
BraA09t38468Z Brassica rapa HOM05D001285 ORTHO05D000199 8.9e-06 54.7 155 25.2


User provided reference genes

Program Settings