Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 6.3e-127 457.6 257 100.0
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 6.0e-85 318.2 255 73.7
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 5.0e-84 315.1 254 74.0
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 5.0e-84 315.1 254 74.4
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.5e-83 313.5 254 74.4
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 5.6e-83 311.6 252 73.4
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 7.3e-83 311.2 255 70.6
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 1.6e-82 310.1 253 75.1
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 2.8e-82 309.3 254 66.9
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 2.8e-82 309.3 256 72.7
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 2.8e-82 309.3 253 74.3
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 6.2e-82 308.1 254 66.9
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 1.4e-81 307.0 255 72.2
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 1.8e-81 306.6 253 70.0
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 3.1e-81 305.8 252 72.6
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 5.2e-81 305.1 256 71.9
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 8.9e-81 304.3 253 62.5
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 2.0e-80 303.1 253 72.7
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 2.6e-80 302.8 256 71.9
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 2.6e-80 302.8 261 66.3
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 1.3e-79 300.4 253 70.0
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 1.3e-79 300.4 255 72.5
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 2.9e-79 299.3 253 69.2
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 3.7e-79 298.9 253 70.8
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 6.4e-79 298.1 255 70.2
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 6.4e-79 298.1 258 62.0
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 8.3e-79 297.7 253 70.8
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 1.4e-78 297.0 256 69.1
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 2.4e-78 296.2 257 70.4
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 3.2e-78 295.8 256 69.1
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 4.1e-78 295.4 257 66.1
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 5.4e-78 295.0 256 68.8
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 7.1e-78 294.7 255 65.5
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 9.2e-78 294.3 253 65.6
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 1.2e-77 293.9 257 68.5
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 2.7e-77 292.7 255 67.1
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 4.6e-77 292.0 257 68.5
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 1.7e-76 290.0 251 70.5
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 2.3e-76 289.7 256 69.1
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 6.6e-76 288.1 257 63.0
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 1.1e-75 287.3 256 68.0
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 1.5e-75 287.0 249 67.1
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 1.5e-75 287.0 252 71.4
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 1.9e-75 286.6 256 67.6
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 1.9e-75 286.6 256 67.6
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 4.3e-75 285.4 247 65.6
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 1.2e-74 283.9 253 68.0
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.2e-74 283.9 254 70.5
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 1.6e-74 283.5 253 68.0
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 4.7e-74 282.0 255 66.7
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 8.1e-74 281.2 256 65.6
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.1e-73 280.8 250 68.4
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 3.1e-73 279.3 256 69.5
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 4.0e-73 278.9 252 67.5
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 8.9e-73 277.7 256 67.6
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 1.5e-72 276.9 257 64.2
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 1.5e-72 276.9 253 64.8
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 2.0e-72 276.6 248 62.9
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 6.4e-71 271.6 254 66.1
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 3.5e-69 265.8 258 64.0
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 4.6e-69 265.4 253 63.6
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 1.5e-67 260.4 255 58.8
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 2.5e-67 259.6 252 61.1
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 3.3e-67 259.2 257 63.4
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 4.3e-67 258.8 250 66.4
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 5.6e-67 258.5 257 63.0
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 7.3e-67 258.1 259 57.9
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 7.3e-67 258.1 249 66.7
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 3.1e-65 252.7 257 61.5
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 8.9e-65 251.1 226 67.3
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 8.9e-65 251.1 283 56.2
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 1.2e-64 250.8 225 64.0
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 1.2e-64 250.8 257 64.2
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 2.6e-64 249.6 250 60.8
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 2.9e-63 246.1 263 59.3
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 3.8e-63 245.7 274 56.9
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 4.2e-62 242.3 257 60.3
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 5.4e-62 241.9 257 57.6
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 2.7e-61 239.6 191 68.1
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 2.7e-61 239.6 257 57.6
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 8.7e-60 234.6 258 58.1
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 2.8e-58 229.6 194 63.4
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 4.8e-58 228.8 257 58.0
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 6.2e-58 228.4 258 58.9
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 8.1e-58 228.0 249 58.2
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 1.1e-57 227.6 255 57.6
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 1.1e-57 227.6 250 60.0
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 3.1e-57 226.1 189 66.7
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 3.4e-56 222.6 241 59.8
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 6.4e-55 218.4 257 54.9
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 1.4e-54 217.2 222 64.0
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 1.2e-53 214.2 206 62.6
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 1.6e-53 213.8 257 57.2
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 3.0e-52 209.5 247 55.9
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 3.7e-50 202.6 258 48.1
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 2.6e-48 196.4 254 48.4
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 1.7e-47 193.7 189 58.7
FvH4_6g22250 Fragaria vesca HOM05D006823 ORTHO05D008608 4.2e-46 189.1 157 68.2
CSS0035925 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.9e-44 182.6 159 67.3
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 2.0e-40 170.2 257 41.2
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 2.0e-40 170.2 261 40.2
CSS0008909 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.9e-38 163.7 155 58.1
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 4.2e-38 162.5 253 48.6
CSS0018235 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.5e-35 154.1 165 60.6
arahy.Tifrunner.gnm1.ann1.WS1HM8 Arachis hypogaea HOM05D006823 ORTHO05D008608 1.8e-33 147.1 138 63.8
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 4.1e-33 146.0 263 39.2
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 6.9e-33 145.2 275 43.3
CSS0004878 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.6e-29 132.9 95 72.6
CSS0021268 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.6e-29 132.9 95 72.6
arahy.Tifrunner.gnm1.ann1.ZK4YW6 Arachis hypogaea HOM05D006823 ORTHO05D008608 6.9e-25 118.6 217 41.5
AagrBONN_evm.TU.Sc2ySwM_369.80 Anthoceros agrestis HOM05D006823 ORTHO05D008608 9.1e-25 118.2 253 37.5
arahy.Tifrunner.gnm1.ann1.V1GDUY Arachis hypogaea HOM05D006823 ORTHO05D008608 1.8e-20 104.0 171 43.3
SMO145G0064 Selaginella moellendorffii HOM05D006823 ORTHO05D008608 2.3e-20 103.6 259 37.1
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 5.7e-19 99.0 164 40.2
Zm00001eb092000 Zea mays HOM05D006823 ORTHO05D008608 3.8e-15 86.3 162 36.4
CBR_g4860 Chara braunii HOM05D006823 ORTHO05D008608 2.5e-14 83.6 332 27.7
Cpa.g.sc85.85 Carica papaya HOM05D006823 ORTHO05D008608 7.2e-14 82.0 45 77.8
Peaxi162Scf00258g00118 Petunia axillaris HOM05D006823 ORTHO05D008608 1.1e-09 68.2 57 61.4
Zm00001eb385990 Zea mays HOM05D006823 ORTHO05D008608 5.0e-07 59.3 99 41.4


User provided reference genes

Program Settings