Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 1.4e-201 706.1 346 100.0
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 6.9e-137 491.1 344 70.3
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 6.1e-133 478.0 344 68.0
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 1.9e-131 473.0 365 65.8
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 1.4e-129 466.8 337 69.7
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 1.0e-127 460.7 344 66.3
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 3.8e-127 458.8 395 61.8
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 1.2e-125 453.8 344 65.1
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 2.7e-125 452.6 340 65.3
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 3.6e-125 452.2 345 67.0
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 3.6e-125 452.2 348 65.5
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 6.7e-124 448.0 349 66.2
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 6.7e-124 448.0 343 65.0
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 1.5e-123 446.8 344 66.3
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 2.0e-123 446.4 345 66.1
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 7.4e-123 444.5 344 66.3
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 6.3e-122 441.4 347 63.7
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 2.4e-121 439.5 343 65.3
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 9.1e-121 437.6 342 64.9
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 1.0e-119 434.1 341 63.3
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 1.0e-116 424.1 353 61.2
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 1.8e-116 423.3 351 61.5
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 3.0e-116 422.5 352 61.4
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 1.1e-115 420.6 344 62.8
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 1.3e-114 417.2 344 61.6
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 2.2e-114 416.4 349 61.3
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 6.3e-114 414.8 348 63.5
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 1.8e-113 413.3 299 67.9
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 1.8e-113 413.3 330 61.8
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 3.1e-113 412.5 335 62.7
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 5.9e-112 408.3 344 61.3
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 1.7e-111 406.8 334 60.5
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 2.9e-111 406.0 355 59.4
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 6.5e-111 404.8 287 67.9
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 7.2e-110 401.4 343 60.3
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 1.6e-109 400.2 335 62.4
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 6.1e-109 398.3 350 57.7
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 1.8e-108 396.7 344 59.9
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 3.0e-108 396.0 344 59.6
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 3.0e-108 396.0 346 58.7
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 5.7e-107 391.7 343 59.2
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 2.2e-106 389.8 349 59.3
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 3.7e-106 389.0 252 72.6
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 3.7e-106 389.0 345 58.3
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 6.3e-106 388.3 339 58.1
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.4e-105 387.1 360 57.8
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.4e-105 387.1 360 57.8
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 3.1e-105 386.0 348 58.3
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 3.5e-104 382.5 343 59.2
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 4.5e-104 382.1 334 59.3
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 7.7e-104 381.3 339 58.1
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 1.0e-103 380.9 345 58.8
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 1.0e-103 380.9 242 74.8
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 1.7e-103 380.2 343 58.6
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 1.7e-103 380.2 348 57.8
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 2.9e-103 379.4 342 58.2
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 2.9e-103 379.4 336 57.7
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 2.9e-103 379.4 351 58.4
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 5.0e-103 378.6 346 57.8
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 8.5e-103 377.9 339 57.5
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 8.5e-103 377.9 344 56.7
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 8.5e-103 377.9 346 58.4
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 2.5e-102 376.3 335 59.1
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 4.2e-102 375.6 347 57.3
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 4.2e-102 375.6 347 57.3
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 7.2e-102 374.8 261 68.2
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 1.2e-101 374.0 257 68.9
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 2.1e-101 373.2 432 49.5
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 2.1e-101 373.2 287 63.1
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 1.8e-100 370.2 239 72.4
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 3.0e-100 369.4 320 56.9
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 6.8e-100 368.2 230 75.2
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 6.8e-100 368.2 282 63.8
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 9.8e-99 364.4 364 53.8
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 9.8e-99 364.4 349 57.3
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 1.7e-98 363.6 237 69.6
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 2.8e-98 362.8 338 55.9
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 2.8e-98 362.8 351 54.1
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 5.9e-96 355.1 349 55.6
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 6.6e-95 351.7 355 52.7
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 3.3e-94 349.4 343 51.9
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 5.2e-92 342.0 220 72.3
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 1.5e-91 340.5 222 69.8
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 1.4e-89 334.0 331 54.1
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 2.4e-89 333.2 208 76.9
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 3.1e-89 332.8 240 71.7
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 1.1e-86 324.3 345 52.5
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 5.6e-86 322.0 328 52.7
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 2.8e-85 319.7 237 65.8
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 5.2e-84 315.5 244 67.2
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 1.2e-83 314.3 198 73.2
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 1.2e-80 304.3 282 57.1
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 3.5e-80 302.8 278 59.4
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 2.5e-78 296.6 174 78.2
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 2.3e-76 290.0 288 54.2
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 8.9e-76 288.1 275 56.4
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 4.9e-74 282.3 345 44.3
MD07G1016400 Malus domestica HOM05D006836 ORTHO05D008691 2.1e-69 266.9 262 54.2
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 4.7e-69 265.8 304 48.7
MD17G1118400 Malus domestica HOM05D006836 ORTHO05D008691 1.1e-68 264.6 245 56.7
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 2.6e-67 260.0 216 56.5
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 4.4e-67 259.2 224 53.1
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 7.5e-67 258.5 238 54.2
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 2.9e-50 203.4 229 45.0
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 4.9e-42 176.0 209 42.1
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 2.1e-37 160.6 202 44.1
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 5.8e-35 152.5 176 48.3
FAN05G5431 Fragaria x ananassa HOM05D006836 ORTHO05D008691 2.5e-33 147.1 103 65.0
FAN09G0369 Fragaria x ananassa HOM05D006836 ORTHO05D008691 9.3e-33 145.2 103 65.0
HPP92_003031 Vanilla planifolia HOM05D006836 ORTHO05D008691 1.8e-28 131.0 92 66.3
PRCOL_00003549 Prasinoderma coloniale HOM05D006836 ORTHO05D008691 1.1e-20 105.1 170 40.0
Hma1.2p1_0599F.1_g187040 Hydrangea macrophylla HOM05D006836 ORTHO05D008691 2.4e-20 104.0 136 47.8
Haze_12595 Corylus avellana HOM05D006836 ORTHO05D008691 3.7e-13 80.1 49 77.6
arahy.Tifrunner.gnm1.ann1.FY93PX Arachis hypogaea HOM05D006836 ORTHO05D000230 6.3e-13 79.3 46 73.9
Oeu037216.1 Olea europaea HOM05D006836 ORTHO05D049434 3.0e-07 60.5 141 35.5
Mapoly0098s0053 Marchantia polymorpha HOM05D001007 ORTHO05D008005 8.8e-07 58.9 85 36.5
Oeu037217.1 Olea europaea HOM05D006836 ORTHO05D049434 8.8e-07 58.9 141 34.8


User provided reference genes

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