Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2821 Cannabis sativa HOM05D005756 ORTHO05D007991 6.6e-263 910.2 434 100.0
CANSAT64G2382 Cannabis sativa HOM05D005756 ORTHO05D007991 8.8e-159 564.3 297 89.6
RcHm_v2.0_Chr2g0156171 Rosa chinensis HOM05D005756 ORTHO05D007991 2.0e-150 536.6 429 62.0
MD09G1126000 Malus domestica HOM05D005756 ORTHO05D007991 2.4e-148 529.6 426 61.7
FvH4_6g40720 Fragaria vesca HOM05D005756 ORTHO05D007991 2.5e-145 519.6 431 57.8
FAN05G2330 Fragaria x ananassa HOM05D005756 ORTHO05D007991 1.2e-144 517.3 431 58.2
FAN14G2144 Fragaria x ananassa HOM05D005756 ORTHO05D007991 3.6e-144 515.8 431 57.5
FAN09G1647 Fragaria x ananassa HOM05D005756 ORTHO05D007991 1.8e-143 513.5 431 58.0
Prupe.3G198700 Prunus persica HOM05D005756 ORTHO05D007991 1.3e-141 507.3 440 58.0
ClCG02G009290 Citrullus lanatus HOM05D005756 ORTHO05D007991 2.9e-141 506.1 431 58.5
MELO3C025971.2 Cucumis melo HOM05D005756 ORTHO05D007991 2.4e-140 503.1 431 58.5
CsaV3_6G009540 Cucumis sativus L. HOM05D005756 ORTHO05D007991 2.4e-140 503.1 431 58.2
Duzib211G0508 Durio zibethinus HOM05D005756 ORTHO05D007991 1.5e-137 493.8 434 56.9
Gorai.001G191800 Gossypium raimondii HOM05D005756 ORTHO05D007991 1.9e-137 493.4 430 57.2
Gohir.D07G171500 Gossypium hirsutum HOM05D005756 ORTHO05D007991 2.5e-137 493.0 430 57.4
Haze_12636 Corylus avellana HOM05D005756 ORTHO05D007991 7.3e-137 491.5 438 55.3
Gohir.A07G164300 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.2e-136 490.7 430 56.7
Actinidia35206 Actinidia chinensis HOM05D005756 ORTHO05D007991 1.6e-136 490.3 436 56.4
Thecc.01G193500 Theobroma cacao HOM05D005756 ORTHO05D007991 1.6e-136 490.3 437 57.0
Sed0018608 Sechium edule HOM05D005756 ORTHO05D007991 2.8e-136 489.6 431 59.2
Actinidia18810 Actinidia chinensis HOM05D005756 ORTHO05D007991 6.8e-135 485.0 431 55.9
CiPaw.03G281000 Carya illinoinensis HOM05D005756 ORTHO05D007991 1.5e-134 483.8 431 56.8
COL.COLO4_33341 Corchorus olitorius HOM05D005756 ORTHO05D007991 9.8e-134 481.1 430 55.3
GSVIVG01030075001 Vitis vinifera HOM05D005756 ORTHO05D007991 9.8e-134 481.1 438 56.8
Gohir.A07G191400 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.7e-133 480.3 434 55.3
Duzib133G1068 Durio zibethinus HOM05D005756 ORTHO05D007991 3.7e-133 479.2 434 55.8
Oeu021293.1 Olea europaea HOM05D005756 ORTHO05D007991 2.4e-132 476.5 431 55.5
Sed0020254 Sechium edule HOM05D005756 ORTHO05D007991 5.4e-132 475.3 418 58.9
Potri.014G166400 Populus trichocarpa HOM05D005756 ORTHO05D007991 9.2e-132 474.6 437 55.1
Sabra14G0126700 Salix brachista HOM05D005756 ORTHO05D007991 3.5e-131 472.6 436 55.3
Manes.12G064800 Manihot esculenta HOM05D005756 ORTHO05D007991 6.0e-131 471.9 439 54.4
Peaxi162Scf00218g00178 Petunia axillaris HOM05D005756 ORTHO05D007991 1.0e-130 471.1 434 53.7
Peaxi162Scf00802g00236 Petunia axillaris HOM05D005756 ORTHO05D007991 1.3e-130 470.7 439 52.6
Ciclev10018016m.g Citrus clementina HOM05D005756 ORTHO05D007991 5.0e-130 468.8 441 56.2
CAN.G60.7 Capsicum annuum HOM05D005756 ORTHO05D007991 2.5e-129 466.5 432 55.3
Rhsim04G0027400 Rhododendron simsii HOM05D005756 ORTHO05D007991 2.5e-129 466.5 469 51.4
Nn1g03213 Nelumbo nucifera HOM05D005756 ORTHO05D007991 5.6e-129 465.3 428 53.5
Gorai.001G221400 Gossypium raimondii HOM05D005756 ORTHO05D007991 9.5e-129 464.5 431 54.1
Nitab4.5_0000006g0690 Nicotiana tabacum HOM05D005756 ORTHO05D007991 9.5e-129 464.5 422 53.8
AL7G44670 Arabidopsis lyrata HOM05D005756 ORTHO05D007991 2.8e-128 463.0 432 51.4
AT5G35770 Arabidopsis thaliana HOM05D005756 ORTHO05D007991 2.8e-128 463.0 432 51.6
Carub.0007s3155 Capsella rubella HOM05D005756 ORTHO05D007991 2.8e-128 463.0 432 51.9
QL08p028191 Quercus lobata HOM05D005756 ORTHO05D007991 4.7e-128 462.2 455 52.7
Manes.13G062400 Manihot esculenta HOM05D005756 ORTHO05D007991 1.4e-127 460.7 441 53.5
MD17G1116000 Malus domestica HOM05D005756 ORTHO05D007991 1.8e-127 460.3 376 59.8
CSS0006225 Camellia sinensis var. sinensis HOM05D005756 ORTHO05D007991 2.3e-127 459.9 438 54.3
PGR042G1143 Punica granatum HOM05D005756 ORTHO05D007991 4.0e-127 459.1 422 55.5
Nitab4.5_0010487g0010 Nicotiana tabacum HOM05D005756 ORTHO05D007991 8.9e-127 458.0 422 52.8
Aa31sc373G50 Aethionema arabicum HOM05D005756 ORTHO05D007991 3.4e-126 456.1 435 52.0
Solyc05g041220.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 1.3e-125 454.1 443 52.4
TAR629G3088 Trochodendron aralioides HOM05D005756 ORTHO05D007991 2.2e-125 453.4 436 51.8
Oeu052200.1 Olea europaea HOM05D005756 ORTHO05D007991 3.7e-125 452.6 470 50.2
Sp7g06350 Schrenkiella parvula HOM05D005756 ORTHO05D007991 4.9e-125 452.2 434 52.1
THA.LOC104815437 Tarenaya hassleriana HOM05D005756 ORTHO05D007991 2.4e-124 449.9 436 52.3
BolC4t25929H Brassica oleracea HOM05D005756 ORTHO05D007991 1.6e-123 447.2 434 51.4
BcaC02g09499 Brassica carinata HOM05D005756 ORTHO05D007991 4.6e-123 445.7 434 51.2
C04p43490 Brassica napus HOM05D005756 ORTHO05D007991 4.6e-123 445.7 434 51.4
A04p10010 Brassica napus HOM05D005756 ORTHO05D007991 6.0e-123 445.3 434 51.4
BraA04t16663Z Brassica rapa HOM05D005756 ORTHO05D007991 6.0e-123 445.3 434 51.4
Sc21g0000630 Simmondsia chinensis HOM05D005756 ORTHO05D007991 3.9e-122 442.6 412 52.7
BcaB06g26996 Brassica carinata HOM05D005756 ORTHO05D007991 8.6e-122 441.4 434 50.9
Lsat_1_v5_gn_7_97180 Lactuca sativa HOM05D005756 ORTHO05D007991 1.5e-121 440.7 442 51.8
SalBow1G0676 Salvia bowleyana HOM05D005756 ORTHO05D007991 1.5e-121 440.7 431 51.5
Hma1.2p1_0545F.1_g176030 Hydrangea macrophylla HOM05D005756 ORTHO05D007991 7.3e-121 438.3 386 57.0
ECA236G0821 Erigeron canadensis HOM05D005756 ORTHO05D007991 4.4e-118 429.1 414 52.2
SalBow1G7885 Salvia bowleyana HOM05D005756 ORTHO05D007991 4.4e-118 429.1 414 52.7
vmacro09483 Vaccinium macrocarpon HOM05D005756 ORTHO05D007991 1.7e-117 427.2 384 54.4
Cc00_g15460 Coffea canephora HOM05D005756 ORTHO05D007991 1.1e-116 424.5 382 52.1
Oeu027646.1 Olea europaea HOM05D005756 ORTHO05D007991 1.4e-116 424.1 382 54.2
PSO675G1451 Papaver somniferum HOM05D005756 ORTHO05D007991 5.4e-116 422.2 442 50.7
Gohir.D07G197700 Gossypium hirsutum HOM05D005756 ORTHO05D007991 2.1e-115 420.2 380 53.7
HanXRQChr11g0328881 Helianthus annuus HOM05D005756 ORTHO05D007991 4.6e-115 419.1 439 49.9
Migut.K00325 Erythranthe guttata HOM05D005756 ORTHO05D007991 6.0e-115 418.7 438 50.5
PSO541G4672 Papaver somniferum HOM05D005756 ORTHO05D007991 6.0e-115 418.7 435 50.8
DCAR_019686 Daucus carota HOM05D005756 ORTHO05D001984 1.0e-114 417.9 372 53.5
Dinv26618 Davidia involucrata HOM05D005756 ORTHO05D007991 1.5e-113 414.1 432 51.4
Nitab4.5_0005267g0030 Nicotiana tabacum HOM05D005756 ORTHO05D007991 3.3e-113 412.9 384 51.8
Eucgr.A01028 Eucalyptus grandis HOM05D005756 ORTHO05D007991 2.4e-111 406.8 381 53.8
Thhalv10005699m.g Eutrema salsugineum HOM05D005756 ORTHO05D007991 9.9e-110 401.4 382 51.3
HanXRQChr04g0126551 Helianthus annuus HOM05D005756 ORTHO05D007991 3.8e-109 399.4 379 52.2
SHI10154 Sapria himalayana HOM05D005756 ORTHO05D007991 6.4e-109 398.7 497 43.9
Migut.J01345 Erythranthe guttata HOM05D005756 ORTHO05D007991 8.4e-109 398.3 426 48.8
Solyc07g045550.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 8.4e-109 398.3 380 50.8
Aqoxy4G02252 Aquilegia oxysepala HOM05D005756 ORTHO05D007991 2.4e-108 396.7 437 48.3
PGSC0003DMG400018834 Solanum tuberosum HOM05D005756 ORTHO05D007991 3.2e-108 396.4 379 52.0
Lj1C795T0 Lonicera japonica HOM05D005756 ORTHO05D007991 5.4e-108 395.6 381 51.7
Lalb_Chr10g0107581 Lupinus albus HOM05D005756 ORTHO05D007991 5.4e-108 395.6 428 47.2
AUR62015018 Chenopodium quinoa HOM05D005756 ORTHO05D007991 7.8e-107 391.7 446 46.2
CDE06G1141 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 2.3e-106 390.2 410 46.3
Ah.01g013810 Amaranthus hybridus HOM05D005756 ORTHO05D007991 5.1e-106 389.0 421 47.5
unitig_0.g2684 Utricularia gibba HOM05D005756 ORTHO05D007991 1.5e-105 387.5 402 49.0
Psat2g005040 Pisum sativum HOM05D005756 ORTHO05D007991 2.8e-104 383.3 446 45.5
Glyma.02G304600 Glycine max HOM05D005756 ORTHO05D007991 3.1e-103 379.8 439 46.9
TPR.G1270 Trifolium pratense HOM05D005756 ORTHO05D007991 4.0e-103 379.4 450 46.2
CARHR216780 Cardamine hirsuta HOM05D005756 ORTHO05D007991 2.6e-102 376.7 352 51.7
Medtr5g097060 Medicago truncatula HOM05D005756 ORTHO05D007991 5.8e-102 375.6 441 46.5
LjContig00081g0010185 Lotus japonicus HOM05D005756 ORTHO05D007991 1.9e-100 370.5 440 45.2
arahy.Tifrunner.gnm1.ann1.5EZV1I Arachis hypogaea HOM05D005756 ORTHO05D007991 2.4e-100 370.2 441 46.3
arahy.Tifrunner.gnm1.ann1.P22I4F Arachis hypogaea HOM05D005756 ORTHO05D007991 4.2e-100 369.4 441 46.0
EL10Ac9g22689 Beta vulgaris HOM05D005756 ORTHO05D007991 2.3e-98 363.6 397 46.3
Phvul.008G284100 Phaseolus vulgaris HOM05D005756 ORTHO05D007991 1.2e-91 341.3 434 45.2
SGA_v2.0_scaffold265G46105 Striga asiatica HOM05D005756 ORTHO05D007991 6.0e-91 339.0 431 45.5
Cpa.g.sc211.22 Carica papaya HOM05D005756 ORTHO05D007991 1.8e-90 337.4 326 50.0
Atru.chr6.3377 Acer truncatum HOM05D005756 ORTHO05D007991 6.7e-90 335.5 343 55.4
VMungo0647G0888 Vigna mungo HOM05D005756 ORTHO05D007991 1.1e-89 334.7 450 42.7
Sopen05g025200 Solanum pennellii HOM05D005756 ORTHO05D000001 3.3e-89 333.2 412 45.4
ATR0624G001 Amborella trichopoda HOM05D005756 ORTHO05D007991 3.7e-88 329.7 430 42.8
Ca_06445_v3 Cicer arietinum L. HOM05D005756 ORTHO05D007991 3.7e-88 329.7 400 44.2
TWI18G0016 Tripterygium wilfordii HOM05D005756 ORTHO05D007991 4.0e-87 326.2 433 40.9
Oeu032118.1 Olea europaea HOM05D005756 ORTHO05D007991 2.2e-85 320.5 446 41.7
HPP92_028362 Vanilla planifolia HOM05D005756 ORTHO05D007991 3.9e-82 309.7 435 41.4
SEGI_03134 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 6.7e-82 308.9 427 37.5
SEGI_14875 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 4.3e-81 306.2 472 37.7
HPP92_014030 Vanilla planifolia HOM05D005756 ORTHO05D007991 9.7e-81 305.1 435 41.1
SGA_v2.0_scaffold12G05997 Striga asiatica HOM05D005756 ORTHO05D007991 2.8e-80 303.5 384 42.7
SEGI_35519 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 3.7e-80 303.1 426 39.2
unitig_748.g7200 Utricularia gibba HOM05D005756 ORTHO05D007991 2.4e-79 300.4 424 41.5
Glyma.14G009200 Glycine max HOM05D005756 ORTHO05D007991 6.9e-79 298.9 351 45.9
Gohir.D11G156320 Gossypium hirsutum HOM05D005756 ORTHO05D007991 2.3e-74 283.9 449 40.3
CDE04G3001 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 1.1e-68 265.0 431 36.4
SEGI_34368 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 3.7e-64 250.0 388 36.3
AUR62029095 Chenopodium quinoa HOM05D005756 ORTHO05D007991 1.1e-63 248.4 266 46.2
SMO364G0494 Selaginella moellendorffii HOM05D005756 ORTHO05D007991 2.1e-51 207.6 406 32.5
Dinv21286 Davidia involucrata HOM05D005756 ORTHO05D007991 1.6e-46 191.4 292 38.7
MBI19_g37437_MAGBIO Magnolia biondii HOM05D005756 ORTHO05D007991 1.7e-29 134.8 130 47.7
SGA_v2.0_scaffold12G05995 Striga asiatica HOM05D002374 ORTHO05D406151 1.6e-22 111.7 147 42.9
SEGI_18115 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 7.3e-12 76.3 105 43.8
Cpa.g.sc211.21 Carica papaya HOM05D005756 ORTHO05D018916 3.4e-09 67.4 56 66.1
Dinv21288 Davidia involucrata HOM05D005756 ORTHO05D018916 2.9e-08 64.3 58 58.6
Hma1.2p1_0545F.1_g176010 Hydrangea macrophylla HOM05D005756 ORTHO05D018916 9.2e-07 59.3 51 66.7
DCAR_019685 Daucus carota HOM05D005756 ORTHO05D018916 6.0e-06 56.6 56 55.4
Oeu027645.1 Olea europaea HOM05D005756 ORTHO05D018916 7.8e-06 56.2 54 61.1


User provided reference genes

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