Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2735 Cannabis sativa HOM05D004844 ORTHO05D006036 0.0e+00 1731.8 944 100.0
Cfa008853 Carpinus fangiana HOM05D004844 ORTHO05D006036 0.0e+00 1169.8 952 69.9
Thecc.02G325500 Theobroma cacao HOM05D004844 ORTHO05D006036 0.0e+00 1090.5 951 66.0
Manes.17G024283 Manihot esculenta HOM05D004844 ORTHO05D006036 3.2e-311 1071.6 965 65.6
Gohir.D04G190100 Gossypium hirsutum HOM05D004844 ORTHO05D006036 1.6e-308 1062.8 958 63.6
Gorai.012G185400 Gossypium raimondii HOM05D004844 ORTHO05D006036 1.7e-307 1059.3 959 63.6
TWI79G0207 Tripterygium wilfordii HOM05D004844 ORTHO05D006036 8.6e-307 1057.0 956 64.3
Gohir.A04G145600 Gossypium hirsutum HOM05D004844 ORTHO05D006036 1.1e-306 1056.6 959 63.4
Cpa.g.sc1.164 Carica papaya HOM05D004844 ORTHO05D006036 7.3e-306 1053.9 952 64.9
Potri.010G140100 Populus trichocarpa HOM05D004844 ORTHO05D006036 9.5e-306 1053.5 950 64.0
GSVIVG01012255001 Vitis vinifera HOM05D004844 ORTHO05D006036 6.2e-305 1050.8 933 63.7
Sabra10G0108200 Salix brachista HOM05D004844 ORTHO05D006036 4.4e-303 1044.6 976 63.1
CiPaw.06G094100 Carya illinoinensis HOM05D004844 ORTHO05D006036 5.4e-301 1037.7 869 68.1
Ciclev10030646m.g Citrus clementina HOM05D004844 ORTHO05D006036 1.7e-299 1032.7 952 64.0
COL.COLO4_27840 Corchorus olitorius HOM05D004844 ORTHO05D006036 9.6e-298 1026.9 1021 61.4
MD16G1058200 Malus domestica HOM05D004844 ORTHO05D006036 1.6e-297 1026.2 932 63.7
TAR627G0787 Trochodendron aralioides HOM05D004844 ORTHO05D006036 2.8e-297 1025.4 946 63.8
Prupe.1G290900 Prunus persica HOM05D004844 ORTHO05D006036 4.2e-293 1011.5 990 61.8
CSS0013036 Camellia sinensis var. sinensis HOM05D004844 ORTHO05D006036 3.0e-291 1005.4 936 63.9
Glyma.02G003100 Glycine max HOM05D004844 ORTHO05D006036 3.3e-290 1001.9 959 62.6
Duzib251G0783 Durio zibethinus HOM05D004844 ORTHO05D006036 2.1e-289 999.2 941 62.4
Phvul.007G274500 Phaseolus vulgaris HOM05D004844 ORTHO05D006036 2.8e-289 998.8 942 63.7
PGR102G1068 Punica granatum HOM05D004844 ORTHO05D006036 6.4e-286 987.6 967 61.8
Eucgr.B03138 Eucalyptus grandis HOM05D004844 ORTHO05D006036 7.1e-285 984.2 960 62.4
THA.LOC104821991 Tarenaya hassleriana HOM05D004844 ORTHO05D006036 1.3e-283 979.9 971 60.8
Glyma.10G005700 Glycine max HOM05D004844 ORTHO05D006036 8.7e-283 977.2 963 61.0
Cc11_g11690 Coffea canephora HOM05D004844 ORTHO05D006036 8.1e-281 970.7 931 61.4
Nn4g23518 Nelumbo nucifera HOM05D004844 ORTHO05D006036 1.2e-279 966.8 954 62.1
Sc04g0007400 Simmondsia chinensis HOM05D004844 ORTHO05D006036 3.8e-278 961.8 949 61.6
Rhsim12G0073500 Rhododendron simsii HOM05D004844 ORTHO05D006036 4.9e-278 961.4 948 60.5
RcHm_v2.0_Chr4g0437801 Rosa chinensis HOM05D004844 ORTHO05D006036 5.5e-277 958.0 955 60.0
FAN17G0509 Fragaria x ananassa HOM05D004844 ORTHO05D006036 3.0e-275 952.2 945 60.7
MBI19_g00156_MAGBIO Magnolia biondii HOM05D004844 ORTHO05D006036 1.1e-272 943.7 1083 54.8
Medtr1g442830 Medicago truncatula HOM05D004844 ORTHO05D006036 5.3e-272 941.4 962 59.5
VMungo0720G2226 Vigna mungo HOM05D004844 ORTHO05D006036 1.5e-271 939.9 965 60.1
FAN12G1456 Fragaria x ananassa HOM05D004844 ORTHO05D006036 7.6e-271 937.6 957 60.3
FAN22G0359 Fragaria x ananassa HOM05D004844 ORTHO05D006036 3.2e-269 932.2 959 57.4
Nitab4.5_0011617g0010 Nicotiana tabacum HOM05D004844 ORTHO05D006036 3.2e-269 932.2 978 57.0
Atru.BG.298.p Acer truncatum HOM05D004844 ORTHO05D006036 4.2e-269 931.8 922 58.1
Medtr1g064300 Medicago truncatula HOM05D004844 ORTHO05D006036 5.5e-269 931.4 972 59.1
MELO3C011408.2 Cucumis melo HOM05D004844 ORTHO05D006036 9.3e-269 930.6 958 58.4
Aqoxy3G03719 Aquilegia oxysepala HOM05D004844 ORTHO05D006036 7.9e-268 927.5 962 58.1
DCAR_022184 Daucus carota HOM05D004844 ORTHO05D006036 1.9e-266 922.9 929 58.3
Psat1g047040 Pisum sativum HOM05D004844 ORTHO05D006036 4.1e-264 915.2 968 57.6
Aa31LG7G8740 Aethionema arabicum HOM05D004844 ORTHO05D006036 4.5e-263 911.8 958 58.5
CsaV3_6G033830 Cucumis sativus L. HOM05D004844 ORTHO05D006036 8.4e-262 907.5 958 56.8
Lalb_Chr25g0284481 Lupinus albus HOM05D004844 ORTHO05D006036 3.2e-261 905.6 950 57.7
Sed0010809 Sechium edule HOM05D004844 ORTHO05D006036 9.3e-261 904.0 958 56.9
PGSC0003DMG400028356 Solanum tuberosum HOM05D004844 ORTHO05D006036 9.3e-261 904.0 943 57.9
Nitab4.5_0000027g0110 Nicotiana tabacum HOM05D004844 ORTHO05D006036 2.7e-260 902.5 976 55.7
Ca_12009_v3 Cicer arietinum L. HOM05D004844 ORTHO05D006036 3.5e-260 902.1 930 57.8
CAN.G1021.26 Capsicum annuum HOM05D004844 ORTHO05D006036 7.9e-260 901.0 971 56.3
Sopen05g006740 Solanum pennellii HOM05D004844 ORTHO05D006036 7.9e-260 901.0 968 57.7
Lj6g0000403 Lotus japonicus HOM05D004844 ORTHO05D006036 2.3e-259 899.4 969 59.5
Solyc05g011990.4 Solanum lycopersicum HOM05D004844 ORTHO05D006036 2.3e-259 899.4 968 57.5
SGA_v2.0_scaffold287G47183 Striga asiatica HOM05D004844 ORTHO05D006036 3.9e-259 898.7 982 57.1
ClCG08G010550 Citrullus lanatus HOM05D004844 ORTHO05D006036 1.1e-258 897.1 969 57.6
FvH4_4g29570 Fragaria vesca HOM05D004844 ORTHO05D006036 1.6e-257 893.3 954 58.3
Thhalv10018096m.g Eutrema salsugineum HOM05D004844 ORTHO05D006036 4.8e-257 891.7 944 56.7
AUR62003071 Chenopodium quinoa HOM05D004844 ORTHO05D006036 4.1e-256 888.6 947 57.4
arahy.Tifrunner.gnm1.ann1.Q1MRHA Arachis hypogaea HOM05D004844 ORTHO05D006036 2.0e-255 886.3 955 57.7
Lsat_1_v5_gn_8_35620 Lactuca sativa HOM05D004844 ORTHO05D006036 3.8e-254 882.1 1004 54.3
Dinv20143 Davidia involucrata HOM05D004844 ORTHO05D006036 1.4e-253 880.2 901 60.3
AUR62007885 Chenopodium quinoa HOM05D004844 ORTHO05D006036 5.5e-253 878.2 951 55.8
HanXRQChr06g0168931 Helianthus annuus HOM05D004844 ORTHO05D006036 1.6e-252 876.7 961 55.8
Carub.0002s1569 Capsella rubella HOM05D004844 ORTHO05D006036 3.0e-251 872.5 953 55.8
AL2G28120 Arabidopsis lyrata HOM05D004844 ORTHO05D006036 1.5e-250 870.2 932 57.3
Sp5g24170 Schrenkiella parvula HOM05D004844 ORTHO05D006036 4.3e-250 868.6 948 55.3
arahy.Tifrunner.gnm1.ann1.79UB1D Arachis hypogaea HOM05D004844 ORTHO05D006036 5.7e-250 868.2 994 54.6
arahy.Tifrunner.gnm1.ann1.H7MRPA Arachis hypogaea HOM05D004844 ORTHO05D006036 2.8e-249 865.9 985 56.1
FAN07G0902 Fragaria x ananassa HOM05D004844 ORTHO05D006036 1.4e-248 863.6 959 56.9
CDE10G1236 Ceratophyllum demersum HOM05D004844 ORTHO05D006036 1.5e-247 860.1 936 53.4
CARHR061950 Cardamine hirsuta HOM05D004844 ORTHO05D006036 2.0e-247 859.8 950 55.6
EL10Ac6g14694 Beta vulgaris HOM05D004844 ORTHO05D006036 3.4e-247 859.0 953 56.9
C02p25790 Brassica napus HOM05D004844 ORTHO05D006036 5.9e-247 858.2 944 56.2
AT1G69070 Arabidopsis thaliana HOM05D004844 ORTHO05D006036 1.0e-246 857.4 948 55.7
A02p15610 Brassica napus HOM05D004844 ORTHO05D006036 1.7e-246 856.7 946 57.0
Ah.03g138670 Amaranthus hybridus HOM05D004844 ORTHO05D006036 8.5e-246 854.4 960 56.8
MSTRG.13461 Avicennia marina HOM05D004844 ORTHO05D006036 8.5e-246 854.4 951 55.8
PSO782G4088 Papaver somniferum HOM05D004844 ORTHO05D006036 1.1e-245 854.0 955 55.6
PSO063G4789 Papaver somniferum HOM05D004844 ORTHO05D006036 2.5e-245 852.8 949 54.6
ECA233G1780 Erigeron canadensis HOM05D004844 ORTHO05D006036 7.2e-245 851.3 945 55.2
Lj6A775T24 Lonicera japonica HOM05D004844 ORTHO05D006036 8.8e-243 844.3 981 55.6
BraA02t06622Z Brassica rapa HOM05D004844 ORTHO05D006036 2.6e-242 842.8 936 56.7
BolC2t08648H Brassica oleracea HOM05D004844 ORTHO05D006036 7.4e-242 841.3 950 54.8
Peaxi162Scf00175g00927 Petunia axillaris HOM05D004844 ORTHO05D006036 7.4e-242 841.3 933 55.6
Actinidia19906 Actinidia chinensis HOM05D004844 ORTHO05D006036 4.8e-241 838.6 859 58.3
Migut.E00244 Erythranthe guttata HOM05D004844 ORTHO05D006036 3.5e-239 832.4 965 54.3
SalBow4G3252 Salvia bowleyana HOM05D004844 ORTHO05D006036 1.2e-236 823.9 1038 51.9
Os03g0598200 Oryza sativa ssp. japonica HOM05D004844 ORTHO05D006036 5.7e-226 788.5 936 52.5
MD13G1058900 Malus domestica HOM05D004844 ORTHO05D006036 1.1e-224 784.3 835 58.7
ATR0827G008 Amborella trichopoda HOM05D004844 ORTHO05D006036 2.9e-222 776.2 877 54.0
Zm00001eb049910 Zea mays HOM05D004844 ORTHO05D006036 2.0e-218 763.5 967 50.3
BcaC03g15030 Brassica carinata HOM05D004844 ORTHO05D006036 1.4e-200 704.1 943 49.2
AagrBONN_evm.TU.Sc2ySwM_228.4292 Anthoceros agrestis HOM05D004844 ORTHO05D006036 8.9e-187 658.3 982 44.4
Pp3c13_7740 Physcomitrium patens HOM05D004844 ORTHO05D006036 3.8e-177 626.3 965 43.9
Mapoly0013s0047 Marchantia polymorpha HOM05D004844 ORTHO05D006036 6.4e-177 625.5 963 44.8
TPR.G25170 Trifolium pratense HOM05D004844 ORTHO05D006036 2.1e-167 594.0 444 67.1
TAR627G1107 Trochodendron aralioides HOM05D004844 ORTHO05D006036 2.5e-157 560.5 638 58.3
Glyma.18G236233 Glycine max HOM05D004844 ORTHO05D006036 2.7e-151 540.4 394 70.1
Oeu019000.3 Olea europaea HOM05D004844 ORTHO05D006036 2.7e-151 540.4 708 50.3
Medtr1g442820 Medicago truncatula HOM05D004844 ORTHO05D006036 2.1e-148 530.8 584 56.8
Oeu063767.1 Olea europaea HOM05D004844 ORTHO05D006036 1.4e-131 474.9 520 60.0
CBR_g4135 Chara braunii HOM05D004844 ORTHO05D006036 3.8e-129 466.8 926 39.7
Nitab4.5_0000027g0130 Nicotiana tabacum HOM05D004844 ORTHO05D006036 3.6e-127 460.3 625 48.0
SEGI_27898 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 4.2e-104 383.6 491 52.7
Haze_11873 Corylus avellana HOM05D004844 ORTHO05D006036 1.1e-91 342.4 322 64.9
unitig_62.g23699 Utricularia gibba HOM05D004844 ORTHO05D006036 1.2e-90 339.0 625 40.8
TAR623G0736 Trochodendron aralioides HOM05D004844 ORTHO05D006036 6.4e-84 316.6 329 60.8
TAR623G1540 Trochodendron aralioides HOM05D004844 ORTHO05D006036 1.4e-83 315.5 267 60.3
TPR.G25179 Trifolium pratense HOM05D004844 ORTHO05D006036 1.3e-73 282.3 314 58.3
SEGI_03778 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 1.2e-66 259.2 405 48.9
Glyma.18G236167 Glycine max HOM05D004844 ORTHO05D006036 1.3e-65 255.8 276 59.4
TAR623G0992 Trochodendron aralioides HOM05D004844 ORTHO05D006036 5.6e-64 250.4 325 54.2
HPP92_012262 Vanilla planifolia HOM05D004844 ORTHO05D008684 7.3e-64 250.0 261 51.7
SEGI_13774 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 4.0e-62 244.2 263 47.5
PRCOL_00006390 Prasinoderma coloniale HOM05D004844 ORTHO05D006036 2.6e-61 241.5 970 27.8
Rhsim10G0117800 Rhododendron simsii HOM05D004844 ORTHO05D006036 1.3e-57 229.2 192 60.9
Cre06.g260850 Chlamydomonas reinhardtii HOM05D004844 ORTHO05D006036 1.1e-54 219.5 1158 26.2
HPP92_012261 Vanilla planifolia HOM05D004844 ORTHO05D006036 3.1e-54 218.0 394 42.9
AagrBONN_evm.TU.Sc2ySwM_362.1117 Anthoceros agrestis HOM05D004844 ORTHO05D006036 1.9e-32 145.6 324 40.7
Cfa022757 Carpinus fangiana HOM05D004844 ORTHO05D126324 4.3e-32 144.4 751 26.2
Oeu048129.1 Olea europaea HOM05D004844 ORTHO05D006036 3.1e-30 138.3 344 39.5
SEGI_26642 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 6.9e-30 137.1 128 57.0
MCO13G646 Micromonas commoda HOM05D004844 ORTHO05D006036 9.0e-30 136.7 684 24.6
SEGI_11983 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 1.5e-29 136.0 133 55.6
Actinidia04685 Actinidia chinensis HOM05D004844 ORTHO05D006036 4.5e-29 134.4 102 69.6
EL10Ac3g06594 Beta vulgaris HOM05D004844 ORTHO05D006036 5.9e-29 134.0 101 67.3
Actinidia04727 Actinidia chinensis HOM05D004844 ORTHO05D006036 2.2e-28 132.1 106 66.0
Actinidia04686 Actinidia chinensis HOM05D004844 ORTHO05D006036 2.9e-28 131.7 127 62.2
unitig_62.g23698 Utricularia gibba HOM05D004844 ORTHO05D006036 1.2e-26 126.3 249 41.4
EL10Ac6g14485 Beta vulgaris HOM05D004844 ORTHO05D006036 6.1e-26 124.0 116 59.5
EL10Ac5g11674 Beta vulgaris HOM05D004844 ORTHO05D010835 8.8e-25 120.2 110 60.9
BolC2t08646H Brassica oleracea HOM05D004844 ORTHO05D006036 4.1e-22 111.3 87 64.4
C02p25770 Brassica napus HOM05D004844 ORTHO05D006036 3.4e-21 108.2 87 63.2
SEGI_15727 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 6.5e-20 104.0 114 51.8
Rhsim04G0143200 Rhododendron simsii HOM05D004844 ORTHO05D006036 1.0e-17 96.7 69 75.4
Rhsim04G0142900 Rhododendron simsii HOM05D004844 ORTHO05D006036 2.6e-16 92.0 56 83.9
MD13G1058800 Malus domestica HOM05D004844 ORTHO05D006036 7.4e-16 90.5 72 68.1
Rhsim10G0117900 Rhododendron simsii HOM05D004844 ORTHO05D006036 7.4e-16 90.5 84 66.7
Dinv34035 Davidia involucrata HOM05D004844 ORTHO05D006036 8.2e-15 87.0 147 40.8
CAN.G1021.25 Capsicum annuum HOM05D004844 ORTHO05D006036 1.2e-13 83.2 205 32.2
Actinidia27764 Actinidia chinensis HOM05D004844 ORTHO05D006036 3.4e-13 81.6 52 76.9
Actinidia04726 Actinidia chinensis HOM05D004844 ORTHO05D006036 1.7e-12 79.3 52 76.9
RcHm_v2.0_Chr1g0340811 Rosa chinensis HOM05D004844 ORTHO05D006036 5.0e-12 77.8 56 69.6
TAR629G1217 Trochodendron aralioides HOM05D004844 ORTHO05D006036 6.5e-12 77.4 113 46.9
Actinidia31976 Actinidia chinensis HOM05D004844 ORTHO05D006036 2.5e-11 75.5 69 59.4
Rhsim10G0118000 Rhododendron simsii HOM05D005261 ORTHO05D006180 2.2e-07 62.4 40 77.5
ATR0735G001 Amborella trichopoda HOM05D004844 ORTHO05D006036 3.7e-07 61.6 73 53.4
AagrBONN_evm.TU.Sc2ySwM_228.4285 Anthoceros agrestis HOM05D004844 ORTHO05D074214 6.3e-07 60.8 89 42.7
SEGI_23631 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 3.1e-06 58.5 48 64.6
arahy.Tifrunner.gnm1.ann1.3Z7JIG Arachis hypogaea HOM05D006386 ORTHO05D007575 7.0e-06 57.4 91 40.7


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