Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 1.1e-254 882.9 452 100.0
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 3.1e-222 775.0 452 85.6
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 4.1e-222 774.6 451 85.4
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 5.3e-222 774.2 454 84.6
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 1.0e-220 770.0 453 84.3
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 1.0e-220 770.0 453 84.3
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 1.3e-220 769.6 453 86.8
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 2.5e-219 765.4 452 83.6
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 7.2e-219 763.8 453 83.9
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 9.4e-219 763.5 456 86.8
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 1.2e-218 763.1 456 86.6
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 1.2e-218 763.1 452 83.4
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 4.7e-218 761.1 455 85.9
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 6.1e-218 760.8 460 86.3
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 6.1e-218 760.8 453 83.7
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 8.0e-218 760.4 452 83.0
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 1.8e-217 759.2 454 83.7
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 2.6e-216 755.4 456 83.1
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 4.4e-216 754.6 452 85.2
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 7.5e-216 753.8 453 82.8
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 7.5e-216 753.8 450 82.4
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 1.7e-215 752.7 461 84.6
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 2.2e-215 752.3 458 81.4
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 8.3e-215 750.4 456 82.2
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 8.3e-215 750.4 452 81.4
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 3.1e-214 748.4 461 82.9
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 3.1e-214 748.4 471 82.8
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 5.4e-214 747.7 454 85.0
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 7.0e-214 747.3 451 83.1
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 1.6e-213 746.1 452 81.9
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 3.5e-213 745.0 454 82.6
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 1.3e-212 743.0 452 81.6
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 1.7e-212 742.7 452 81.6
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 1.7e-212 742.7 469 80.6
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 3.8e-212 741.5 455 81.1
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 3.8e-212 741.5 456 82.2
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 1.5e-211 739.6 472 80.7
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 1.5e-211 739.6 473 80.1
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 1.9e-211 739.2 453 82.3
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 1.9e-211 739.2 452 81.4
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 5.5e-211 737.6 460 83.5
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 5.5e-211 737.6 453 82.6
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 9.5e-211 736.9 451 81.8
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 1.2e-210 736.5 452 80.3
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 1.6e-210 736.1 460 83.3
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 2.1e-210 735.7 452 81.0
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 3.6e-210 734.9 457 81.8
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 4.7e-210 734.6 456 81.1
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 6.1e-210 734.2 453 82.6
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 1.8e-209 732.6 455 81.5
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 1.8e-209 732.6 457 81.4
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 2.3e-209 732.3 455 81.5
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 3.0e-209 731.9 518 75.3
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 6.8e-209 730.7 453 81.7
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 3.1e-206 721.8 448 80.8
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 2.0e-205 719.2 458 78.4
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 1.5e-203 713.0 458 79.5
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 2.5e-203 712.2 453 79.7
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 5.6e-203 711.1 454 79.3
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 1.2e-202 709.9 454 78.9
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 1.2e-202 709.9 442 80.1
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 2.8e-202 708.8 456 78.7
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 2.3e-201 705.7 458 78.2
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 2.3e-201 705.7 457 79.6
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 3.0e-201 705.3 456 78.7
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 4.0e-201 704.9 452 79.9
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 5.2e-201 704.5 456 78.7
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 8.9e-201 703.7 456 79.8
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 2.6e-200 702.2 452 79.4
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 1.7e-199 699.5 455 79.3
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 2.9e-199 698.7 424 81.8
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 3.7e-199 698.4 455 79.1
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 3.7e-199 698.4 424 81.8
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 8.3e-199 697.2 381 89.0
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 9.2e-198 693.7 456 77.6
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 6.0e-197 691.0 382 88.0
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 4.7e-194 681.4 455 77.1
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 1.1e-193 680.2 451 75.4
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 1.8e-193 679.5 435 82.1
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 2.0e-192 676.0 453 76.4
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 2.0e-192 676.0 362 90.9
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 1.1e-190 670.2 457 77.9
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 7.0e-190 667.5 361 90.3
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 1.2e-189 666.8 387 83.2
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 2.7e-189 665.6 466 75.1
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 7.8e-189 664.1 452 79.4
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 1.6e-186 656.4 460 74.6
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 7.5e-184 647.5 452 74.8
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 1.7e-183 646.4 358 87.4
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 1.8e-177 626.3 380 78.7
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 2.2e-175 619.4 332 91.0
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 3.9e-172 608.6 332 89.5
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 9.3e-166 587.4 450 66.4
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 2.1e-162 576.2 382 71.7
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 1.2e-160 570.5 383 72.3
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 3.8e-159 565.5 456 67.3
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 1.1e-158 563.9 357 80.1
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 2.7e-157 559.3 354 80.8
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 3.9e-156 555.4 417 74.3
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 7.1e-150 534.6 381 67.5
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 1.6e-149 533.5 283 90.8
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 5.8e-144 515.0 279 89.6
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 4.6e-141 505.4 333 76.6
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 8.2e-138 494.6 405 61.5
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 5.0e-135 485.3 313 81.8
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 2.2e-130 469.9 318 74.2
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 8.2e-130 468.0 403 63.5
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 2.2e-127 459.9 332 72.0
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 3.2e-126 456.1 236 91.9
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 3.2e-126 456.1 236 91.9
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 4.2e-126 455.7 416 60.3
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 4.2e-110 402.5 412 49.8
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 4.7e-93 345.9 242 74.8
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 1.1e-76 291.6 318 46.9
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 1.5e-62 244.6 337 42.4
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 1.6e-56 224.6 401 36.2
TPR.G22619 Trifolium pratense HOM05D005960 ORTHO05D007537 3.1e-52 210.3 147 72.1
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 2.0e-51 207.6 384 35.7
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 2.4e-49 200.7 117 82.9
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 3.2e-49 200.3 349 35.5
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 5.4e-49 199.5 341 36.1
Cc07_g03900 Coffea canephora HOM05D005960 ORTHO05D007537 6.9e-44 182.6 102 83.3
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 7.6e-43 179.1 363 31.7
AUR62018149 Chenopodium quinoa HOM05D005960 ORTHO05D007537 1.7e-42 177.9 100 86.0
Potri.004G125301 Populus trichocarpa HOM05D005960 ORTHO05D007537 6.0e-40 169.5 149 66.4
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 3.9e-39 166.8 96 87.5
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 3.7e-21 107.1 51 90.2
MD09G1061200 Malus domestica HOM05D005960 ORTHO05D007537 1.7e-18 98.2 88 59.1
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 1.1e-14 85.5 45 97.8
MCO08G023 Micromonas commoda HOM05D005960 ORTHO05D270145 5.5e-09 66.6 169 27.2
Zm00001eb030310 Zea mays HOM05D005960 ORTHO05D051632 7.2e-09 66.2 38 86.8
Zm00001eb250570 Zea mays HOM05D005960 ORTHO05D051632 9.4e-09 65.9 52 67.3


User provided reference genes

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