Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2711 Cannabis sativa HOM05D002474 ORTHO05D006727 1.5e-256 889.0 447 100.0
QL02p080225 Quercus lobata HOM05D002474 ORTHO05D006727 6.6e-172 607.8 476 66.6
Atru.chr8.2476 Acer truncatum HOM05D002474 ORTHO05D006727 2.3e-169 599.4 476 64.9
Nn4g23008 Nelumbo nucifera HOM05D002474 ORTHO05D006727 2.3e-169 599.4 476 65.1
Ciclev10011620m.g Citrus clementina HOM05D002474 ORTHO05D006727 5.4e-166 588.2 477 64.2
RcHm_v2.0_Chr2g0169251 Rosa chinensis HOM05D002474 ORTHO05D006727 5.9e-165 584.7 476 64.1
FvH4_6g49390 Fragaria vesca HOM05D002474 ORTHO05D006727 3.3e-163 578.9 476 63.4
Thecc.09G254500 Theobroma cacao HOM05D002474 ORTHO05D006727 6.1e-162 574.7 481 63.2
Cfa007503 Carpinus fangiana HOM05D002474 ORTHO05D006727 2.3e-161 572.8 485 62.5
Phvul.004G025500 Phaseolus vulgaris HOM05D002474 ORTHO05D006727 1.2e-160 570.5 439 66.3
Potri.004G130000 Populus trichocarpa HOM05D002474 ORTHO05D006727 7.5e-160 567.8 479 63.0
Solyc02g067480.3 Solanum lycopersicum HOM05D002474 ORTHO05D006727 7.5e-160 567.8 468 63.0
TPR.G4252 Trifolium pratense HOM05D002474 ORTHO05D006727 3.7e-159 565.5 464 62.3
CsaV3_5G037800 Cucumis sativus L. HOM05D002474 ORTHO05D006727 4.9e-159 565.1 453 64.7
MELO3C021965.2 Cucumis melo HOM05D002474 ORTHO05D006727 6.4e-159 564.7 432 66.4
Sopen02g016630 Solanum pennellii HOM05D002474 ORTHO05D006727 8.3e-159 564.3 468 62.8
CAN.G1128.5 Capsicum annuum HOM05D002474 ORTHO05D006727 1.9e-158 563.1 470 62.8
GSVIVG01032597001 Vitis vinifera HOM05D002474 ORTHO05D006727 3.2e-158 562.4 476 63.2
Aqoxy3G00804 Aquilegia oxysepala HOM05D002474 ORTHO05D006727 5.4e-158 561.6 408 70.3
PGSC0003DMG400006940 Solanum tuberosum HOM05D002474 ORTHO05D006727 7.0e-158 561.2 468 62.6
Psat1g077640 Pisum sativum HOM05D002474 ORTHO05D006727 9.2e-158 560.8 433 64.9
Hma1.2p1_0449F.1_g154950 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 2.0e-157 559.7 428 67.8
Eucgr.J02138 Eucalyptus grandis HOM05D002474 ORTHO05D006727 3.5e-157 558.9 467 62.1
CSS0021046 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 4.6e-157 558.5 476 63.0
Nitab4.5_0006062g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 1.7e-156 556.6 474 62.0
Gorai.013G255100 Gossypium raimondii HOM05D002474 ORTHO05D006727 3.0e-156 555.8 476 62.8
HanXRQChr17g0547501 Helianthus annuus HOM05D002474 ORTHO05D006727 3.0e-156 555.8 472 61.4
CiPaw.04G020500 Carya illinoinensis HOM05D002474 ORTHO05D006727 8.6e-156 554.3 475 62.7
Haze_14590 Corylus avellana HOM05D002474 ORTHO05D006727 1.1e-155 553.9 457 63.7
Oeu033341.3 Olea europaea HOM05D002474 ORTHO05D006727 1.1e-155 553.9 507 57.6
Migut.K01338 Erythranthe guttata HOM05D002474 ORTHO05D006727 3.3e-155 552.4 473 59.6
Lsat_1_v5_gn_3_102300 Lactuca sativa HOM05D002474 ORTHO05D006727 3.3e-155 552.4 473 60.7
Nitab4.5_0002699g0040 Nicotiana tabacum HOM05D002474 ORTHO05D006727 7.3e-155 551.2 437 65.2
PSO478G4089 Papaver somniferum HOM05D002474 ORTHO05D006727 1.2e-154 550.4 417 65.9
ECA246G0556 Erigeron canadensis HOM05D002474 ORTHO05D006727 2.1e-154 549.7 435 63.4
Gohir.A13G220300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 2.8e-154 549.3 476 62.2
FAN02G0112 Fragaria x ananassa HOM05D002474 ORTHO05D006727 2.3e-153 546.2 452 64.2
Lalb_Chr06g0175531 Lupinus albus HOM05D002474 ORTHO05D006727 3.1e-153 545.8 438 63.9
TAR629G1594 Trochodendron aralioides HOM05D002474 ORTHO05D006727 3.1e-153 545.8 434 65.2
Medtr6g011270 Medicago truncatula HOM05D002474 ORTHO05D006727 6.8e-153 544.7 437 63.2
RhsimUnG0054500 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.5e-152 543.5 478 60.0
Ca_04259_v3 Cicer arietinum L. HOM05D002474 ORTHO05D006727 2.6e-152 542.7 440 63.6
Sc11g0006920 Simmondsia chinensis HOM05D002474 ORTHO05D006727 3.7e-151 538.9 433 62.8
Lj2g0026556 Lotus japonicus HOM05D002474 ORTHO05D006727 1.9e-150 536.6 408 66.4
PSO161G0033 Papaver somniferum HOM05D002474 ORTHO05D006727 3.2e-150 535.8 417 64.7
AL7G50200 Arabidopsis lyrata HOM05D002474 ORTHO05D006727 2.1e-149 533.1 466 59.0
CARHR262240 Cardamine hirsuta HOM05D002474 ORTHO05D006727 1.0e-148 530.8 446 59.9
FAN14G2185 Fragaria x ananassa HOM05D002474 ORTHO05D006727 3.9e-148 528.9 484 59.9
Carub.0007s3579 Capsella rubella HOM05D002474 ORTHO05D006727 6.6e-148 528.1 438 61.4
Thhalv10028129m.g Eutrema salsugineum HOM05D002474 ORTHO05D006727 8.6e-148 527.7 424 61.8
arahy.Tifrunner.gnm1.ann1.B2F8E8 Arachis hypogaea HOM05D002474 ORTHO05D006727 1.5e-147 526.9 444 60.6
COL.COLO4_24935 Corchorus olitorius HOM05D002474 ORTHO05D006727 2.5e-147 526.2 394 67.5
Gohir.D13G224300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 5.6e-147 525.0 485 60.0
Nitab4.5_0023901g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 1.6e-146 523.5 404 67.1
THA.LOC104805441 Tarenaya hassleriana HOM05D002474 ORTHO05D006727 2.3e-145 519.6 450 58.9
Aa31LG9G1670 Aethionema arabicum HOM05D002474 ORTHO05D006727 1.5e-144 516.9 449 60.1
BraA04t16928Z Brassica rapa HOM05D002474 ORTHO05D006727 2.6e-144 516.2 463 57.9
AT5G39940 Arabidopsis thaliana HOM05D002474 ORTHO05D006727 5.8e-144 515.0 440 60.2
Duzib168G1861 Durio zibethinus HOM05D002474 ORTHO05D006727 8.3e-143 511.1 481 57.2
Ah.12g065360 Amaranthus hybridus HOM05D002474 ORTHO05D006727 1.4e-142 510.4 401 63.8
unitig_748.g8621 Utricularia gibba HOM05D002474 ORTHO05D006727 2.4e-142 509.6 437 59.5
Sabra04G0087600 Salix brachista HOM05D002474 ORTHO05D006727 5.4e-142 508.4 519 55.1
Hund13252 Selenicereus undatus HOM05D002474 ORTHO05D006727 2.1e-141 506.5 520 55.4
SGA_v2.0_scaffold224G42953 Striga asiatica HOM05D002474 ORTHO05D006727 2.1e-141 506.5 413 62.7
VMungo0464G0136 Vigna mungo HOM05D002474 ORTHO05D006727 4.6e-141 505.4 480 56.7
Glyma.19G019000 Glycine max HOM05D002474 ORTHO05D006727 8.6e-140 501.1 440 60.0
CDE08G1502 Ceratophyllum demersum HOM05D002474 ORTHO05D006727 5.6e-139 498.4 424 58.3
FAN09G4837 Fragaria x ananassa HOM05D002474 ORTHO05D006727 7.3e-139 498.0 484 57.6
TWI60G0106 Tripterygium wilfordii HOM05D002474 ORTHO05D006727 3.1e-137 492.7 445 59.3
ATR0609G116 Amborella trichopoda HOM05D002474 ORTHO05D006727 8.9e-137 491.1 445 58.4
PGR083G0251 Punica granatum HOM05D002474 ORTHO05D006727 1.2e-136 490.7 410 62.9
Peaxi162Scf00059g00319 Petunia axillaris HOM05D002474 ORTHO05D006727 2.0e-136 490.0 444 60.4
EL10Ac2g02929 Beta vulgaris HOM05D002474 ORTHO05D006727 2.6e-136 489.6 416 61.1
AUR62031654 Chenopodium quinoa HOM05D002474 ORTHO05D006727 1.1e-134 484.2 411 60.8
Os12g0638800 Oryza sativa ssp. japonica HOM05D002474 ORTHO05D006727 1.4e-134 483.8 419 58.2
Zm00001eb033100 Zea mays HOM05D002474 ORTHO05D006727 3.2e-134 482.6 481 52.4
arahy.Tifrunner.gnm1.ann1.DRNA5E Arachis hypogaea HOM05D002474 ORTHO05D006727 7.1e-134 481.5 444 56.8
Cpa.g.sc14.49 Carica papaya HOM05D002474 ORTHO05D006727 7.1e-134 481.5 487 55.0
Rhsim10G0032000 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.2e-130 470.7 449 57.5
Sed0010242 Sechium edule HOM05D002474 ORTHO05D006727 3.6e-130 469.2 381 63.8
ClCG09G018440 Citrullus lanatus HOM05D002474 ORTHO05D006727 4.0e-129 465.7 578 46.5
FAN05G2709 Fragaria x ananassa HOM05D002474 ORTHO05D006727 5.3e-129 465.3 458 56.3
DCAR_011168 Daucus carota HOM05D002474 ORTHO05D006727 2.0e-128 463.4 397 60.2
Dinv33713 Davidia involucrata HOM05D002474 ORTHO05D006727 8.4e-127 458.0 348 67.5
BcaB06g27397 Brassica carinata HOM05D002474 ORTHO05D006727 1.6e-125 453.8 401 58.4
C04p46420 Brassica napus HOM05D002474 ORTHO05D006727 1.3e-122 444.1 418 54.3
CSS0037906 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 3.6e-122 442.6 347 66.3
A04p12710 Brassica napus HOM05D002474 ORTHO05D006727 2.6e-120 436.4 423 53.4
AagrBONN_evm.TU.Sc2ySwM_369.199 Anthoceros agrestis HOM05D002474 ORTHO05D006727 2.9e-119 433.0 435 51.0
Hma1.2p1_0449F.1_g154940 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 3.2e-118 429.5 288 75.3
Prupe.3G272800 Prunus persica HOM05D002474 ORTHO05D006727 1.5e-115 420.6 372 62.9
Pp3c23_2270 Physcomitrium patens HOM05D002474 ORTHO05D006727 5.6e-115 418.7 425 50.4
vmacro05750 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 4.2e-110 402.5 438 51.4
Mapoly0035s0063 Marchantia polymorpha HOM05D002474 ORTHO05D006727 1.2e-109 401.0 412 49.8
AUR62018296 Chenopodium quinoa HOM05D002474 ORTHO05D006727 3.5e-109 399.4 395 53.9
HPP92_014139 Vanilla planifolia HOM05D002474 ORTHO05D006727 2.3e-108 396.7 377 52.8
SalBow1G0883 Salvia bowleyana HOM05D002474 ORTHO05D006727 3.1e-105 386.3 464 47.6
HanXRQChr16g0519921 Helianthus annuus HOM05D002474 ORTHO05D006727 4.9e-103 379.0 324 61.1
SMO137G0254 Selaginella moellendorffii HOM05D002474 ORTHO05D006727 2.4e-97 360.1 459 43.1
Manes.S095220 Manihot esculenta HOM05D002474 ORTHO05D006727 5.0e-87 325.9 306 58.5
QL02p080121 Quercus lobata HOM05D002474 ORTHO05D006727 2.4e-81 307.0 190 76.3
QL02p080117 Quercus lobata HOM05D002474 ORTHO05D006727 1.4e-76 291.2 225 68.9
Cc07_g02930 Coffea canephora HOM05D002474 ORTHO05D006727 2.6e-75 287.0 182 75.3
Cc07_g02920 Coffea canephora HOM05D002474 ORTHO05D006727 5.3e-73 279.3 262 56.5
Hund13251 Selenicereus undatus HOM05D002474 ORTHO05D006727 9.4e-62 241.9 213 62.9
CBR_g50657 Chara braunii HOM05D002474 ORTHO05D006727 1.7e-58 231.1 212 51.9
BolC4t26228H Brassica oleracea HOM05D002474 ORTHO05D006727 3.6e-53 213.4 205 54.1
Rhsim10G0031600 Rhododendron simsii HOM05D002474 ORTHO05D006727 9.8e-51 205.3 206 54.9
Lj7A402G46 Lonicera japonica HOM05D002474 ORTHO05D006727 1.8e-49 201.1 258 48.4
Lsat_1_v5_gn_6_77521 Lactuca sativa HOM05D002474 ORTHO05D006727 7.0e-41 172.6 223 44.8
SpUN0485_0010 Schrenkiella parvula HOM05D002474 ORTHO05D006727 1.3e-39 168.3 148 58.1
Lj7A402G47 Lonicera japonica HOM05D002474 ORTHO05D006727 1.2e-35 155.2 156 53.8
CBR_g59258 Chara braunii HOM05D002474 ORTHO05D006727 1.7e-34 151.4 124 59.7
Sp7g01810 Schrenkiella parvula HOM05D002474 ORTHO05D006727 3.9e-31 140.2 134 56.7
C09p60950 Brassica napus HOM05D002474 ORTHO05D006727 5.1e-31 139.8 111 59.5
Actinidia35021 Actinidia chinensis HOM05D002474 ORTHO05D006727 2.1e-29 134.4 248 40.7
SEGI_37465 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 3.6e-29 133.7 87 65.5
BolC9t56457H Brassica oleracea HOM05D002474 ORTHO05D006727 9.9e-27 125.6 103 58.3
MBI04_g20672_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 4.6e-24 116.7 188 41.0
Lsat_1_v5_gn_2_107941 Lactuca sativa HOM05D002474 ORTHO05D005260 1.7e-23 114.8 134 46.3
C09p36190 Brassica napus HOM05D002474 ORTHO05D006727 3.0e-23 114.0 96 56.2
HanXRQChr09g0265421 Helianthus annuus HOM05D002474 ORTHO05D006727 3.9e-23 113.6 90 62.2
SEGI_13584 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 1.5e-19 101.7 146 41.8
MBI04_g20673_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 3.4e-19 100.5 77 55.8
BcaC04g18910 Brassica carinata HOM05D002474 ORTHO05D006727 1.3e-18 98.6 126 42.9
MCO07G529 Micromonas commoda HOM05D002474 ORTHO05D006727 5.4e-17 93.2 459 24.8
Rhsim10G0031800 Rhododendron simsii HOM05D002474 ORTHO05D006727 3.6e-13 80.5 55 61.8
FAN10G3970 Fragaria x ananassa HOM05D002474 ORTHO05D006727 4.8e-13 80.1 50 74.0
Peaxi162Scf00036g01918 Petunia axillaris HOM05D002474 ORTHO05D006727 1.4e-12 78.6 56 60.7
Peaxi162Scf00781g00210 Petunia axillaris HOM05D002474 ORTHO05D006727 2.4e-12 77.8 56 60.7
FAN10G3068 Fragaria x ananassa HOM05D002474 ORTHO05D006727 2.2e-10 71.2 42 76.2
Cre09.g389400 Chlamydomonas reinhardtii HOM05D002474 ORTHO05D006727 4.2e-09 67.0 132 34.1
Glyma.13G065601 Glycine max HOM05D002474 ORTHO05D006727 1.2e-08 65.5 49 69.4
vmacro03926 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 5.6e-06 56.6 38 65.8
vmacro05749 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 5.6e-06 56.6 32 78.1


User provided reference genes

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