Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2695 Cannabis sativa HOM05D007397 ORTHO05D009336 2.3e-97 359.0 191 100.0
FAN03G3257 Fragaria x ananassa HOM05D007397 ORTHO05D009336 1.9e-56 223.0 184 67.4
GSVIVG01032626001 Vitis vinifera HOM05D007397 ORTHO05D009336 2.5e-56 222.6 201 63.7
Haze_16973 Corylus avellana HOM05D007397 ORTHO05D009336 1.3e-55 220.3 193 65.8
MELO3C025487.2 Cucumis melo HOM05D007397 ORTHO05D009336 6.2e-55 218.0 192 63.5
CiPaw.01G279900 Carya illinoinensis HOM05D007397 ORTHO05D009336 1.1e-54 217.2 192 65.6
Cfa001558 Carpinus fangiana HOM05D007397 ORTHO05D009336 2.4e-54 216.1 193 65.8
FAN01G1406 Fragaria x ananassa HOM05D007397 ORTHO05D009336 2.4e-54 216.1 184 65.2
FAN01G1537 Fragaria x ananassa HOM05D007397 ORTHO05D009336 9.0e-54 214.2 184 64.7
Lj1P929T40 Lonicera japonica HOM05D007397 ORTHO05D009336 7.6e-53 211.1 145 73.8
MD07G1184800 Malus domestica HOM05D007397 ORTHO05D009336 3.8e-52 208.8 189 61.9
CSS0023256 Camellia sinensis var. sinensis HOM05D007397 ORTHO05D009336 4.9e-52 208.4 189 63.5
Lj5g0010768 Lotus japonicus HOM05D007397 ORTHO05D009336 6.5e-52 208.0 195 62.6
Medtr1g115740 Medicago truncatula HOM05D007397 ORTHO05D009336 6.5e-52 208.0 193 59.6
Actinidia38224 Actinidia chinensis HOM05D007397 ORTHO05D009336 3.2e-51 205.7 182 65.4
Cpa.g.sc1.304 Carica papaya HOM05D007397 ORTHO05D009336 5.5e-51 204.9 186 64.5
ClCG09G020320 Citrullus lanatus HOM05D007397 ORTHO05D009336 7.1e-51 204.5 194 61.3
MSTRG.7898 Avicennia marina HOM05D007397 ORTHO05D009336 1.6e-50 203.4 186 61.8
TAR320G0002 Trochodendron aralioides HOM05D007397 ORTHO05D009336 2.7e-50 202.6 192 59.4
Ca_11323_v3 Cicer arietinum L. HOM05D007397 ORTHO05D009336 2.3e-49 199.5 190 61.6
SGA_v2.0_scaffold165G38243 Striga asiatica HOM05D007397 ORTHO05D009336 5.1e-49 198.4 189 59.3
Glyma.04G095200 Glycine max HOM05D007397 ORTHO05D009336 6.7e-49 198.0 189 58.2
Cc02_g08640 Coffea canephora HOM05D007397 ORTHO05D009336 8.7e-49 197.6 200 57.0
Migut.L01413 Erythranthe guttata HOM05D007397 ORTHO05D009336 8.7e-49 197.6 172 66.3
CsaV3_5G026110 Cucumis sativus L. HOM05D007397 ORTHO05D009336 1.1e-48 197.2 179 62.0
Prupe.2G224700 Prunus persica HOM05D007397 ORTHO05D009336 1.1e-48 197.2 190 60.0
Glyma.06G097000 Glycine max HOM05D007397 ORTHO05D009336 1.5e-48 196.8 189 57.7
Psat6g239080 Pisum sativum HOM05D007397 ORTHO05D009336 1.5e-48 196.8 194 60.3
TPR.G10388 Trifolium pratense HOM05D007397 ORTHO05D009336 2.5e-48 196.1 195 60.0
PGR142G1402 Punica granatum HOM05D007397 ORTHO05D009336 9.6e-48 194.1 199 58.3
TWI38G1005 Tripterygium wilfordii HOM05D007397 ORTHO05D009336 9.6e-48 194.1 190 62.6
Rhsim09G0155900 Rhododendron simsii HOM05D007397 ORTHO05D009336 1.3e-47 193.7 189 61.9
Aqoxy5G01687 Aquilegia oxysepala HOM05D007397 ORTHO05D009336 3.7e-47 192.2 192 57.3
Oeu044824.1 Olea europaea HOM05D007397 ORTHO05D009336 4.8e-47 191.8 192 59.4
RcHm_v2.0_Chr1g0365021 Rosa chinensis HOM05D007397 ORTHO05D009336 4.8e-47 191.8 186 59.1
PGSC0003DMG400011470 Solanum tuberosum HOM05D007397 ORTHO05D009336 4.8e-47 191.8 192 58.9
QL08p057549 Quercus lobata HOM05D007397 ORTHO05D009336 8.2e-47 191.0 192 59.9
Potri.008G047800 Populus trichocarpa HOM05D007397 ORTHO05D009336 1.4e-46 190.3 194 55.7
Sabra08G0033900 Salix brachista HOM05D007397 ORTHO05D009336 1.4e-46 190.3 194 55.7
Sopen04g005370 Solanum pennellii HOM05D007397 ORTHO05D009336 1.8e-46 189.9 194 57.7
EL10Ac2g03499 Beta vulgaris HOM05D007397 ORTHO05D009336 3.1e-46 189.1 154 63.6
Carub.0003s1170 Capsella rubella HOM05D007397 ORTHO05D009336 4.1e-46 188.7 181 58.0
AUR62042666 Chenopodium quinoa HOM05D007397 ORTHO05D009336 6.9e-46 188.0 170 58.2
Potri.010G213600 Populus trichocarpa HOM05D007397 ORTHO05D009336 6.9e-46 188.0 194 59.3
DCAR_015250 Daucus carota HOM05D007397 ORTHO05D009336 9.0e-46 187.6 129 72.1
Hma1.2p1_0348F.1_g131665 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 2.6e-45 186.0 195 57.4
Hma1.2p1_0348F.1_g131670 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 2.6e-45 186.0 195 57.4
AT3G12345 Arabidopsis thaliana HOM05D007397 ORTHO05D009336 3.4e-45 185.7 179 57.5
Solyc04g010190.1 Solanum lycopersicum HOM05D007397 ORTHO05D009336 5.9e-45 184.9 192 57.3
Nn2g12828 Nelumbo nucifera HOM05D007397 ORTHO05D009336 7.6e-45 184.5 197 53.3
Dinv25942 Davidia involucrata HOM05D007397 ORTHO05D009336 1.0e-44 184.1 178 63.5
FAN10G1155 Fragaria x ananassa HOM05D007397 ORTHO05D009336 1.3e-44 183.7 176 62.5
Lalb_Chr06g0164111 Lupinus albus HOM05D007397 ORTHO05D009336 1.7e-44 183.3 189 58.2
Gohir.D10G218000 Gossypium hirsutum HOM05D007397 ORTHO05D009336 2.2e-44 183.0 197 59.4
Phvul.009G036400 Phaseolus vulgaris HOM05D007397 ORTHO05D009336 6.5e-44 181.4 189 55.0
BraA05t22502Z Brassica rapa HOM05D007397 ORTHO05D009336 8.5e-44 181.0 181 53.6
HanXRQChr14g0460741 Helianthus annuus HOM05D007397 ORTHO05D009336 8.5e-44 181.0 173 59.5
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 8.5e-44 181.0 174 62.6
AL3G23990 Arabidopsis lyrata HOM05D007397 ORTHO05D009336 1.9e-43 179.9 186 55.9
A05p37050 Brassica napus HOM05D007397 ORTHO05D009336 1.9e-43 179.9 179 54.7
MBI05_g32638_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 1.9e-43 179.9 191 52.9
Sp3g10540 Schrenkiella parvula HOM05D007397 ORTHO05D009336 7.2e-43 177.9 183 55.2
CARHR086880 Cardamine hirsuta HOM05D007397 ORTHO05D009336 1.6e-42 176.8 179 54.2
Gorai.011G244600 Gossypium raimondii HOM05D007397 ORTHO05D009336 1.6e-42 176.8 196 57.1
BcaB04g21083 Brassica carinata HOM05D007397 ORTHO05D009336 4.6e-42 175.3 189 52.4
BcaB04g21085 Brassica carinata HOM05D007397 ORTHO05D009336 4.6e-42 175.3 189 52.4
Sed0011140 Sechium edule HOM05D007397 ORTHO05D009336 4.6e-42 175.3 188 53.7
unitig_22.g6935 Utricularia gibba HOM05D007397 ORTHO05D009336 4.6e-42 175.3 183 55.7
C05p55480 Brassica napus HOM05D007397 ORTHO05D009336 7.9e-42 174.5 179 54.2
BolC5t34214H Brassica oleracea HOM05D007397 ORTHO05D009336 7.9e-42 174.5 179 54.2
Thecc.10G062300 Theobroma cacao HOM05D007397 ORTHO05D009336 7.9e-42 174.5 184 57.6
Thhalv10021616m.g Eutrema salsugineum HOM05D007397 ORTHO05D009336 1.8e-41 173.3 183 56.3
BcaC05g29269 Brassica carinata HOM05D007397 ORTHO05D009336 2.3e-41 172.9 178 53.4
PSO384G5114 Papaver somniferum HOM05D007397 ORTHO05D009336 2.3e-41 172.9 196 53.6
VMungo1309G1572 Vigna mungo HOM05D007397 ORTHO05D009336 2.3e-41 172.9 189 52.4
SalBow2G2387 Salvia bowleyana HOM05D007397 ORTHO05D009336 3.0e-41 172.6 189 55.0
Aa31sc153G60 Aethionema arabicum HOM05D007397 ORTHO05D009336 1.5e-40 170.2 179 55.9
CAN.G1557.1 Capsicum annuum HOM05D007397 ORTHO05D009336 3.3e-40 169.1 115 72.2
ATR0681G332 Amborella trichopoda HOM05D007397 ORTHO05D009336 7.4e-40 167.9 184 52.7
PSO339G5749 Papaver somniferum HOM05D007397 ORTHO05D009336 9.7e-40 167.5 194 52.1
Sc06g0001870 Simmondsia chinensis HOM05D007397 ORTHO05D009336 9.7e-40 167.5 132 63.6
Gohir.A10G209700 Gossypium hirsutum HOM05D007397 ORTHO05D009336 2.2e-39 166.4 197 54.3
THA.LOC104827311 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 3.7e-39 165.6 180 52.8
THA.LOC104809886 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 2.6e-37 159.5 182 52.2
AUR62025539 Chenopodium quinoa HOM05D007397 ORTHO05D009336 4.5e-37 158.7 163 57.7
Atru.chr12.591 Acer truncatum HOM05D007397 ORTHO05D009336 5.0e-36 155.2 199 52.3
CDE02G3908 Ceratophyllum demersum HOM05D001333 ORTHO05D001208 1.2e-34 150.6 159 50.9
Nitab4.5_0007221g0040 Nicotiana tabacum HOM05D007397 ORTHO05D009336 1.2e-34 150.6 191 50.8
MBI05_g30757_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 2.1e-34 149.8 163 49.7
Ciclev10034008m.g Citrus clementina HOM05D007397 ORTHO05D009336 8.8e-33 144.4 90 75.6
COL.COLO4_37769 Corchorus olitorius HOM05D007397 ORTHO05D009336 3.3e-32 142.5 186 47.8
SEGI_38306 Sequoiadendron giganteum HOM05D007397 ORTHO05D009336 3.3e-32 142.5 156 50.0
Duzib106G0993 Durio zibethinus HOM05D007397 ORTHO05D009336 4.4e-32 142.1 113 64.6
HPP92_025097 Vanilla planifolia HOM05D007397 ORTHO05D009336 2.8e-31 139.4 188 44.1
Manes.10G039600 Manihot esculenta HOM05D007397 ORTHO05D009336 9.1e-30 134.4 193 48.7
Mapoly0043s0078 Marchantia polymorpha HOM05D007397 ORTHO05D009336 9.1e-30 134.4 134 52.2
Peaxi162Scf00135g00025 Petunia axillaris HOM05D007397 ORTHO05D009336 2.0e-29 133.3 90 68.9
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 7.7e-29 131.3 140 57.1
Cfa009156 Carpinus fangiana HOM05D007397 ORTHO05D009336 1.4e-27 127.1 138 60.1
Zm00001eb397310 Zea mays HOM05D007397 ORTHO05D009336 1.6e-26 123.6 196 43.4
Nitab4.5_0006737g0020 Nicotiana tabacum HOM05D007397 ORTHO05D009336 8.8e-25 117.9 157 49.7
Os06g0484500 Oryza sativa ssp. japonica HOM05D007397 ORTHO05D009336 3.1e-22 109.4 161 44.1
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 2.9e-20 102.8 142 40.1
Duzib114G0919 Durio zibethinus HOM05D007397 ORTHO05D009336 8.0e-18 94.7 88 62.5
AagrBONN_evm.TU.Sc2ySwM_368.51 Anthoceros agrestis HOM05D007397 ORTHO05D009336 2.0e-16 90.1 187 36.9
C03p57580 Brassica napus HOM05D007397 ORTHO05D009336 3.5e-13 79.3 114 40.4
BcaC03g17725 Brassica carinata HOM05D007397 ORTHO05D009336 8.5e-12 74.7 108 40.7
Lsat_1_v5_gn_7_115640 Lactuca sativa HOM05D018034 ORTHO05D006583 1.8e-09 67.0 109 47.7


User provided reference genes

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