Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2667 Cannabis sativa HOM05D004743 ORTHO05D005698 7.0e-84 313.9 160 100.0
MD14G1060700 Malus domestica HOM05D004743 ORTHO05D005698 1.7e-77 292.7 160 90.0
Prupe.7G073800 Prunus persica HOM05D004743 ORTHO05D005698 4.9e-77 291.2 160 90.0
MD12G1061000 Malus domestica HOM05D004743 ORTHO05D005698 1.1e-76 290.0 160 89.4
FvH4_6g22680 Fragaria vesca HOM05D004743 ORTHO05D005698 5.4e-76 287.7 160 88.8
FAN02G0944 Fragaria x ananassa HOM05D004743 ORTHO05D005698 5.4e-76 287.7 160 88.8
FAN05G2002 Fragaria x ananassa HOM05D004743 ORTHO05D005698 5.4e-76 287.7 160 88.8
FAN09G0554 Fragaria x ananassa HOM05D004743 ORTHO05D005698 5.4e-76 287.7 160 88.8
FAN14G2026 Fragaria x ananassa HOM05D004743 ORTHO05D005698 5.4e-76 287.7 160 88.8
FAN14G4474 Fragaria x ananassa HOM05D004743 ORTHO05D005698 5.4e-76 287.7 160 88.8
RcHm_v2.0_Chr3g0480261 Rosa chinensis HOM05D004743 ORTHO05D005698 1.2e-75 286.6 160 89.4
Haze_19962 Corylus avellana HOM05D004743 ORTHO05D005698 1.6e-75 286.2 158 87.3
CiPaw.10G028000 Carya illinoinensis HOM05D004743 ORTHO05D005698 1.1e-73 280.0 158 86.1
Dinv14277 Davidia involucrata HOM05D004743 ORTHO05D005698 1.6e-72 276.2 160 84.4
Sc13g0002130 Simmondsia chinensis HOM05D004743 ORTHO05D005698 8.0e-72 273.9 156 86.5
Ciclev10012973m.g Citrus clementina HOM05D004743 ORTHO05D005698 2.3e-71 272.3 160 83.8
Sed0015240 Sechium edule HOM05D004743 ORTHO05D005698 2.3e-71 272.3 158 81.6
Sed0004669 Sechium edule HOM05D004743 ORTHO05D005698 4.0e-71 271.6 158 82.3
Cpa.g.sc85.89 Carica papaya HOM05D004743 ORTHO05D005698 5.2e-71 271.2 160 82.5
CSS0027207 Camellia sinensis var. sinensis HOM05D004743 ORTHO05D005698 6.8e-71 270.8 160 83.1
CSS0048559 Camellia sinensis var. sinensis HOM05D004743 ORTHO05D005698 6.8e-71 270.8 160 83.1
Gorai.006G141500 Gossypium raimondii HOM05D004743 ORTHO05D005698 8.9e-71 270.4 156 84.6
Hund19191 Selenicereus undatus HOM05D004743 ORTHO05D005698 1.2e-70 270.0 156 84.6
Hma1.2p1_0005F.1_g004310 Hydrangea macrophylla HOM05D004743 ORTHO05D005698 2.0e-70 269.2 159 81.8
Thecc.05G168500 Theobroma cacao HOM05D004743 ORTHO05D005698 2.6e-70 268.9 160 82.5
Gohir.A09G126700 Gossypium hirsutum HOM05D004743 ORTHO05D005698 3.4e-70 268.5 156 84.0
Gohir.A01G192000 Gossypium hirsutum HOM05D004743 ORTHO05D005698 9.8e-70 266.9 154 83.1
EL10Ac3g06947 Beta vulgaris HOM05D004743 ORTHO05D005698 1.3e-69 266.5 156 82.7
MELO3C009644.2 Cucumis melo HOM05D004743 ORTHO05D005698 1.3e-69 266.5 158 81.0
Rhsim03G0009100 Rhododendron simsii HOM05D004743 ORTHO05D005698 1.3e-69 266.5 160 81.9
Cc06_g22060 Coffea canephora HOM05D004743 ORTHO05D005698 1.7e-69 266.2 158 81.0
Gohir.D01G178000 Gossypium hirsutum HOM05D004743 ORTHO05D005698 1.7e-69 266.2 153 83.7
Gorai.002G225100 Gossypium raimondii HOM05D004743 ORTHO05D005698 1.7e-69 266.2 153 83.7
Lju124A30G9 Lonicera japonica HOM05D004743 ORTHO05D005698 1.7e-69 266.2 158 82.9
Manes.08G045000 Manihot esculenta HOM05D004743 ORTHO05D005698 1.7e-69 266.2 160 80.6
Gohir.D09G123248 Gossypium hirsutum HOM05D004743 ORTHO05D005698 2.2e-69 265.8 156 83.3
Manes.09G032100 Manihot esculenta HOM05D004743 ORTHO05D005698 2.2e-69 265.8 160 81.2
Potri.006G059300 Populus trichocarpa HOM05D004743 ORTHO05D005698 2.2e-69 265.8 160 80.6
Cc00_g14600 Coffea canephora HOM05D004743 ORTHO05D005698 4.9e-69 264.6 158 80.4
Duzib106G0699 Durio zibethinus HOM05D004743 ORTHO05D005698 4.9e-69 264.6 156 82.7
vmacro07935 Vaccinium macrocarpon HOM05D004743 ORTHO05D005698 4.9e-69 264.6 160 81.2
Actinidia09383 Actinidia chinensis HOM05D000570 ORTHO05D005344 6.4e-69 264.2 160 80.6
COL.COLO4_36134 Corchorus olitorius HOM05D004743 ORTHO05D005698 8.3e-69 263.8 160 80.6
CDE07G0719 Ceratophyllum demersum HOM05D004743 ORTHO05D005698 1.1e-68 263.5 154 83.8
CsaV3_3G039010 Cucumis sativus L. HOM05D004743 ORTHO05D005698 1.1e-68 263.5 158 79.7
PGR142G2650 Punica granatum HOM05D004743 ORTHO05D005698 1.1e-68 263.5 158 79.7
THA.LOC104824464 Tarenaya hassleriana HOM05D004743 ORTHO05D005698 1.6e-67 259.6 160 78.8
Nitab4.5_0001538g0070 Nicotiana tabacum HOM05D004743 ORTHO05D005698 2.7e-67 258.8 157 81.5
Oeu033746.1 Olea europaea HOM05D004743 ORTHO05D005698 2.7e-67 258.8 160 79.4
DCAR_013558 Daucus carota HOM05D004743 ORTHO05D005698 6.0e-67 257.7 154 82.5
HanXRQChr10g0295691 Helianthus annuus HOM05D004743 ORTHO05D005698 1.0e-66 256.9 155 80.6
AUR62024326 Chenopodium quinoa HOM05D004743 ORTHO05D005698 1.3e-66 256.5 157 77.1
Nitab4.5_0000991g0030 Nicotiana tabacum HOM05D004743 ORTHO05D005698 1.3e-66 256.5 157 80.3
Thhalv10017352m.g Eutrema salsugineum HOM05D004743 ORTHO05D005698 3.9e-66 255.0 160 76.9
TAR623G0239 Trochodendron aralioides HOM05D004743 ORTHO05D005698 3.9e-66 255.0 157 79.6
Ah.13g076070 Amaranthus hybridus HOM05D004743 ORTHO05D005698 6.6e-66 254.2 156 80.8
CARHR137250 Cardamine hirsuta HOM05D004743 ORTHO05D005698 6.6e-66 254.2 160 76.9
ECA247G0571 Erigeron canadensis HOM05D004743 ORTHO05D005698 8.6e-66 253.8 154 81.2
AT2G42210 Arabidopsis thaliana HOM05D004743 ORTHO05D005698 1.1e-65 253.4 160 76.2
HanXRQChr15g0491311 Helianthus annuus HOM05D004743 ORTHO05D005698 1.1e-65 253.4 154 79.9
TAR633G2476 Trochodendron aralioides HOM05D004743 ORTHO05D005698 1.1e-65 253.4 154 79.9
Duzib128G1008 Durio zibethinus HOM05D004743 ORTHO05D005698 1.5e-65 253.1 156 80.1
Sp4g24390 Schrenkiella parvula HOM05D004743 ORTHO05D005698 1.5e-65 253.1 160 75.6
VMungo1383G0120 Vigna mungo HOM05D004743 ORTHO05D005698 1.5e-65 253.1 160 78.8
AUR62012065 Chenopodium quinoa HOM05D004743 ORTHO05D005698 1.9e-65 252.7 156 76.9
MBI04_g27127_MAGBIO Magnolia biondii HOM05D004743 ORTHO05D005698 5.6e-65 251.1 154 79.9
Psat3g069720 Pisum sativum HOM05D004743 ORTHO05D005698 5.6e-65 251.1 160 78.8
AL4G40570 Arabidopsis lyrata HOM05D004743 ORTHO05D005698 7.3e-65 250.8 160 75.0
Ca_08506_v3 Cicer arietinum L. HOM05D004743 ORTHO05D005698 7.3e-65 250.8 154 81.2
Thhalv10006285m.g Eutrema salsugineum HOM05D004743 ORTHO05D005698 9.5e-65 250.4 160 74.4
Sp5g04820 Schrenkiella parvula HOM05D004743 ORTHO05D005698 9.5e-65 250.4 160 74.4
CAN.G1161.21 Capsicum annuum HOM05D004743 ORTHO05D005698 1.6e-64 249.6 155 78.1
Carub.0004s2455 Capsella rubella HOM05D004743 ORTHO05D005698 3.6e-64 248.4 160 75.0
Phvul.001G140800 Phaseolus vulgaris HOM05D004743 ORTHO05D005698 3.6e-64 248.4 160 76.9
Glyma.03G142900 Glycine max HOM05D004743 ORTHO05D005698 8.0e-64 247.3 160 76.9
TAR633G1605 Trochodendron aralioides HOM05D004743 ORTHO05D005698 8.0e-64 247.3 154 77.9
MSTRG.19893 Avicennia marina HOM05D004743 ORTHO05D005698 1.1e-63 246.9 158 76.6
Glyma.19G145900 Glycine max HOM05D004743 ORTHO05D005698 1.1e-63 246.9 160 76.9
BcaC02g12469 Brassica carinata HOM05D004743 ORTHO05D005698 1.4e-63 246.5 161 74.5
BcaNung04402 Brassica carinata HOM05D004743 ORTHO05D005698 1.4e-63 246.5 161 74.5
A05p02780 Brassica napus HOM05D004743 ORTHO05D005698 1.4e-63 246.5 161 74.5
C04p03370 Brassica napus HOM05D004743 ORTHO05D005698 1.4e-63 246.5 161 74.5
BraA05t19270Z Brassica rapa HOM05D004743 ORTHO05D005698 1.4e-63 246.5 161 74.5
BcaB06g29229 Brassica carinata HOM05D004743 ORTHO05D005698 2.3e-63 245.7 156 75.0
Lsat_1_v5_gn_9_28001 Lactuca sativa HOM05D004743 ORTHO05D005698 2.3e-63 245.7 154 77.3
Peaxi162Scf00003g04210 Petunia axillaris HOM05D004743 ORTHO05D005698 3.1e-63 245.4 157 76.4
Aa31LG1G24060 Aethionema arabicum HOM05D004743 ORTHO05D005698 4.0e-63 245.0 160 72.5
Aa31LG10G12610 Aethionema arabicum HOM05D004743 ORTHO05D005698 5.2e-63 244.6 160 73.1
PGSC0003DMG400011432 Solanum tuberosum HOM05D004743 ORTHO05D005698 6.8e-63 244.2 153 77.8
SGA_v2.0_scaffold69G23079 Striga asiatica HOM05D004743 ORTHO05D005698 6.8e-63 244.2 158 74.1
A04p32050 Brassica napus HOM05D004743 ORTHO05D005698 8.9e-63 243.8 156 74.4
BcaC02g07257 Brassica carinata HOM05D004743 ORTHO05D005698 1.2e-62 243.4 156 74.4
C04p69570 Brassica napus HOM05D004743 ORTHO05D005698 1.2e-62 243.4 156 74.4
BolC4t28455H Brassica oleracea HOM05D004743 ORTHO05D005698 1.2e-62 243.4 156 74.4
GSVIVG01033524001 Vitis vinifera HOM05D004743 ORTHO05D005698 1.2e-62 243.4 158 73.4
CDE04G2796 Ceratophyllum demersum HOM05D004743 ORTHO05D005698 1.5e-62 243.0 138 87.0
BraA04t18662Z Brassica rapa HOM05D004743 ORTHO05D005698 2.0e-62 242.7 156 73.7
PSO339G6088 Papaver somniferum HOM05D004743 ORTHO05D005698 2.6e-62 242.3 154 76.6
PSO384G3106 Papaver somniferum HOM05D004743 ORTHO05D005698 2.6e-62 242.3 154 76.6
ATR0605G135 Amborella trichopoda HOM05D004743 ORTHO05D005698 3.4e-62 241.9 157 73.2
Sopen10g029310 Solanum pennellii HOM05D004743 ORTHO05D005698 4.4e-62 241.5 153 76.5
Aqoxy2G00062 Aquilegia oxysepala HOM05D004743 ORTHO05D005698 5.8e-62 241.1 154 74.0
Solyc10g078690.3 Solanum lycopersicum HOM05D004743 ORTHO05D005698 1.3e-61 240.0 153 76.5
arahy.Tifrunner.gnm1.ann1.2GY28N Arachis hypogaea HOM05D000570 ORTHO05D005344 8.3e-61 237.3 159 74.8
arahy.Tifrunner.gnm1.ann1.CB7VX4 Arachis hypogaea HOM05D004743 ORTHO05D005344 8.3e-61 237.3 159 74.8
Migut.J01816 Erythranthe guttata HOM05D004743 ORTHO05D005698 1.1e-60 236.9 158 70.9
Lj1g0027895 Lotus japonicus HOM05D004743 ORTHO05D005344 1.1e-60 236.9 154 76.0
Lalb_Chr04g0259631 Lupinus albus HOM05D004743 ORTHO05D005698 1.1e-60 236.9 160 72.5
Sabra06G0042700 Salix brachista HOM05D004743 ORTHO05D005698 1.4e-60 236.5 209 60.8
Cfa016899 Carpinus fangiana HOM05D006381 ORTHO05D008523 1.9e-60 236.1 135 85.2
ClCG10G017380 Citrullus lanatus HOM05D004743 ORTHO05D005698 4.1e-60 235.0 248 52.8
THA.LOC104802456 Tarenaya hassleriana HOM05D004743 ORTHO05D005698 1.5e-57 226.5 143 76.9
Lalb_Chr18g0047741 Lupinus albus HOM05D004743 ORTHO05D005698 2.1e-56 222.6 144 77.1
unitig_749.g14140 Utricularia gibba HOM05D004743 ORTHO05D005698 2.8e-56 222.2 154 70.1
Zm00001eb252780 Zea mays HOM05D004743 ORTHO05D005698 6.2e-56 221.1 146 71.9
HPP92_001833 Vanilla planifolia HOM05D004743 ORTHO05D005698 1.1e-55 220.3 154 68.8
Os02g0717300 Oryza sativa ssp. japonica HOM05D004743 ORTHO05D005698 1.2e-54 216.9 146 70.5
Nn7g36049 Nelumbo nucifera HOM05D004743 ORTHO05D005698 2.0e-54 216.1 123 86.2
TWI77G0677 Tripterygium wilfordii HOM05D004743 ORTHO05D005698 4.4e-54 214.9 161 66.5
Atru.chr8.1050 Acer truncatum HOM05D004743 ORTHO05D005698 2.2e-53 212.6 125 81.6
TWI53G0547 Tripterygium wilfordii HOM05D004743 ORTHO05D005698 2.3e-50 202.6 162 62.3
TPR.G13232 Trifolium pratense HOM05D004743 ORTHO05D005698 4.3e-49 198.4 123 78.9
unitig_26.g9039 Utricularia gibba HOM05D004743 ORTHO05D005698 7.3e-49 197.6 207 53.1
Oeu008114.1 Olea europaea HOM05D004743 ORTHO05D005698 3.6e-48 195.3 301 42.2
SalBow6G0397 Salvia bowleyana HOM05D004743 ORTHO05D005698 2.6e-46 189.1 187 54.5
SEGI_22128 Sequoiadendron giganteum HOM05D004743 ORTHO05D005698 2.6e-46 189.1 160 60.6
QL07p023149 Quercus lobata HOM05D004743 ORTHO05D005698 8.4e-45 184.1 109 78.9
Hund19190 Selenicereus undatus HOM05D004743 ORTHO05D005698 9.6e-41 170.6 144 63.2
CiPaw.09G032100 Carya illinoinensis HOM05D004743 ORTHO05D005698 2.6e-38 162.5 98 82.7
Eucgr.A02439 Eucalyptus grandis HOM05D004743 ORTHO05D005698 7.6e-38 161.0 113 73.5
BolC4t21974H Brassica oleracea HOM05D004743 ORTHO05D005698 7.8e-35 151.0 101 73.3
C04p16200 Brassica napus HOM05D004743 ORTHO05D005698 5.1e-34 148.3 133 56.4
Mapoly0011s0060 Marchantia polymorpha HOM05D004743 ORTHO05D005698 1.6e-32 143.3 154 48.7
Pp3c6_9862 Physcomitrium patens HOM05D004743 ORTHO05D005698 1.7e-29 133.3 149 47.7
Pp3c5_22310 Physcomitrium patens HOM05D004743 ORTHO05D005698 2.2e-29 132.9 149 47.7
CBR_g32607 Chara braunii HOM05D004743 ORTHO05D005698 9.3e-28 127.5 157 42.7
C04p16220 Brassica napus HOM05D004743 ORTHO05D005698 4.6e-27 125.2 77 75.3
BcaC03g17937 Brassica carinata HOM05D004743 ORTHO05D005698 2.3e-26 122.9 146 52.7
Os09g0279300 Oryza sativa ssp. japonica HOM05D004743 ORTHO05D005698 2.5e-25 119.4 132 44.7
THA.LOC104824466 Tarenaya hassleriana HOM05D004743 ORTHO05D005698 2.5e-25 119.4 123 52.0
AagrBONN_evm.TU.Sc2ySwM_362.1495 Anthoceros agrestis HOM05D004743 ORTHO05D005698 7.4e-25 117.9 145 44.1
C09p44920 Brassica napus HOM05D004743 ORTHO05D005698 1.2e-22 110.5 85 63.5
arahy.Tifrunner.gnm1.ann1.YRY7W4 Arachis hypogaea HOM05D004743 ORTHO05D005698 2.6e-22 109.4 84 66.7
arahy.Tifrunner.gnm1.ann1.GN7FJD Arachis hypogaea HOM05D004743 ORTHO05D005698 5.8e-22 108.2 65 78.5
arahy.Tifrunner.gnm1.ann1.MK9Y65 Arachis hypogaea HOM05D004743 ORTHO05D005698 7.6e-22 107.8 96 60.4
arahy.Tifrunner.gnm1.ann1.W4Y9B5 Arachis hypogaea HOM05D004743 ORTHO05D005698 7.6e-22 107.8 96 60.4
arahy.Tifrunner.gnm1.ann1.HF75RM Arachis hypogaea HOM05D004743 ORTHO05D005698 1.4e-20 103.6 64 78.1
Zm00001eb308440 Zea mays HOM05D004743 ORTHO05D005698 1.9e-20 103.2 133 40.6
arahy.Tifrunner.gnm1.ann1.L5I9G2 Arachis hypogaea HOM05D004743 ORTHO05D005698 2.1e-19 99.8 64 75.0
C02p59940 Brassica napus HOM05D004743 ORTHO05D005698 6.0e-19 98.2 101 57.4
BcaC04g22765 Brassica carinata HOM05D004743 ORTHO05D005698 1.8e-18 96.7 78 64.1
PSO063G6118 Papaver somniferum HOM05D004743 ORTHO05D005698 3.0e-10 69.3 146 35.6
arahy.Tifrunner.gnm1.ann1.1ZE97X Arachis hypogaea HOM05D004743 ORTHO05D005698 1.6e-08 63.5 69 52.2
arahy.Tifrunner.gnm1.ann1.JW2HXV Arachis hypogaea HOM05D004743 ORTHO05D005698 4.8e-08 62.0 69 50.7
TPR.G284 Trifolium pratense HOM05D004743 ORTHO05D005698 1.1e-07 60.8 49 67.3
AT3G57900 Arabidopsis thaliana HOM05D004743 ORTHO05D005698 2.6e-06 56.2 96 36.5


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