Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 1.0e-88 330.1 175 100.0
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 1.7e-62 243.0 175 76.6
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 2.0e-60 236.1 175 74.3
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 2.5e-58 229.2 176 71.6
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 7.2e-58 227.6 175 69.7
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 1.6e-57 226.5 178 69.1
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 1.6e-57 226.5 178 69.1
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 3.6e-57 225.3 177 72.9
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 3.6e-57 225.3 177 72.9
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 4.7e-57 224.9 181 71.3
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 6.1e-57 224.6 175 69.1
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 1.0e-56 223.8 181 67.4
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 3.0e-56 222.2 175 69.7
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 3.0e-56 222.2 180 71.1
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 4.0e-56 221.9 176 70.5
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 4.0e-56 221.9 176 70.5
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 4.0e-56 221.9 181 69.1
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 1.2e-55 220.3 175 68.6
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 1.2e-55 220.3 179 68.7
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 1.2e-55 220.3 179 70.9
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 1.5e-55 219.9 177 69.5
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 2.6e-55 219.2 178 69.1
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 7.5e-55 217.6 175 67.4
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 1.3e-54 216.9 177 69.5
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 1.3e-54 216.9 178 69.1
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 1.7e-54 216.5 177 69.5
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 1.7e-54 216.5 176 69.9
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 1.7e-54 216.5 177 67.8
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 1.7e-54 216.5 176 67.0
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 2.2e-54 216.1 175 66.9
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 2.8e-54 215.7 175 68.0
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 3.7e-54 215.3 179 68.7
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 3.7e-54 215.3 177 65.5
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 3.7e-54 215.3 175 69.7
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 4.8e-54 214.9 177 68.4
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 8.3e-54 214.2 183 66.1
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 8.3e-54 214.2 183 66.1
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 8.3e-54 214.2 178 70.2
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 1.1e-53 213.8 177 68.4
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 1.4e-53 213.4 177 68.4
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 1.8e-53 213.0 178 65.7
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.4e-53 212.6 173 68.2
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 3.1e-53 212.2 176 68.2
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 4.1e-53 211.8 181 64.1
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 4.1e-53 211.8 178 69.1
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 5.4e-53 211.5 181 68.5
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 7.0e-53 211.1 175 65.7
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 2.0e-52 209.5 185 67.0
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 3.5e-52 208.8 179 70.4
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 3.5e-52 208.8 172 66.9
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 4.5e-52 208.4 179 65.9
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 4.5e-52 208.4 174 64.9
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 4.5e-52 208.4 176 67.6
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 1.3e-51 206.8 176 64.8
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 2.2e-51 206.1 176 65.9
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 5.0e-51 204.9 176 65.9
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 8.5e-51 204.1 176 64.2
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 1.1e-50 203.8 179 68.2
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 1.5e-50 203.4 179 64.8
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 1.9e-50 203.0 176 65.9
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 5.5e-50 201.4 176 64.8
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 7.2e-50 201.1 176 64.2
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 9.4e-50 200.7 175 65.7
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.2e-49 200.3 182 63.7
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 4.7e-49 198.4 176 65.9
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 4.7e-49 198.4 176 63.6
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 1.4e-48 196.8 181 62.4
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 1.4e-48 196.8 175 65.1
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.4e-48 196.8 179 64.2
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 3.0e-48 195.7 176 62.5
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 5.2e-48 194.9 177 65.5
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 6.8e-48 194.5 180 65.6
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 8.8e-48 194.1 181 61.3
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 8.8e-48 194.1 155 70.3
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 1.2e-47 193.7 176 61.9
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 2.0e-47 193.0 171 64.9
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 3.4e-47 192.2 181 62.4
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 4.4e-47 191.8 181 62.4
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 7.5e-47 191.0 163 68.1
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 7.5e-47 191.0 181 61.3
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 1.3e-46 190.3 179 65.4
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 1.7e-46 189.9 179 60.9
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 2.8e-46 189.1 181 60.8
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 2.8e-46 189.1 181 62.4
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 4.9e-46 188.3 130 76.2
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 6.3e-46 188.0 178 60.1
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 1.1e-45 187.2 182 61.5
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 2.4e-45 186.0 178 62.4
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 2.4e-45 186.0 114 82.5
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 3.1e-45 185.7 179 60.9
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 5.4e-45 184.9 163 63.2
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 5.4e-45 184.9 178 61.2
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 5.4e-45 184.9 130 74.6
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 7.0e-45 184.5 182 59.9
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 1.2e-44 183.7 135 71.1
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 1.2e-44 183.7 135 71.1
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 1.6e-44 183.3 164 63.4
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 1.6e-44 183.3 164 63.4
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 2.7e-44 182.6 174 59.8
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 4.5e-44 181.8 182 61.0
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 1.0e-43 180.6 181 59.1
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 1.3e-43 180.3 179 60.3
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 1.3e-43 180.3 184 58.7
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 1.7e-43 179.9 179 60.9
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 1.7e-43 179.9 179 60.9
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 2.3e-43 179.5 103 88.3
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 2.9e-43 179.1 178 58.4
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 5.0e-43 178.3 169 63.3
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 5.0e-43 178.3 106 82.1
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 3.3e-42 175.6 177 57.1
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 4.2e-42 175.3 183 57.9
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 4.2e-42 175.3 127 73.2
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 7.2e-42 174.5 164 62.2
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 6.1e-41 171.4 179 58.7
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 2.0e-36 156.4 110 70.9
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 3.6e-33 145.6 144 59.7
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 4.7e-33 145.2 85 84.7
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 8.0e-33 144.4 142 62.0
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 3.1e-32 142.5 163 48.5
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 1.7e-30 136.7 110 62.7
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 3.7e-30 135.6 128 62.5
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 7.0e-29 131.3 113 59.3
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 6.0e-28 128.3 173 45.1
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 4.7e-25 118.6 174 43.1
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 4.9e-22 108.6 130 44.6
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 2.1e-20 103.2 142 44.4
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 3.9e-19 99.0 127 48.0
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 1.2e-15 87.4 170 40.0
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 3.4e-07 59.3 98 28.6
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 1.3e-06 57.4 98 29.6
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 1.7e-06 57.0 122 27.0
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 1.7e-06 57.0 118 27.1
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 1.7e-06 57.0 98 28.6
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 2.2e-06 56.6 98 28.6
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 2.9e-06 56.2 99 28.3
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 2.9e-06 56.2 98 28.6
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 4.9e-06 55.5 118 26.3
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 4.9e-06 55.5 98 27.6
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 4.9e-06 55.5 98 27.6
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 6.4e-06 55.1 118 26.3
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 8.4e-06 54.7 98 27.6


User provided reference genes

Program Settings