Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2626 Cannabis sativa HOM05D008422 ORTHO05D000352 3.1e-69 265.0 131 100.0
CANSAT54G2836 Cannabis sativa HOM05D000429 ORTHO05D000352 4.3e-55 218.0 130 80.8
CANSAT25G0395 Cannabis sativa HOM05D000429 ORTHO05D000352 1.4e-53 213.0 130 80.0
CANSAT01G1774 Cannabis sativa HOM05D008422 ORTHO05D000352 7.8e-49 197.2 130 72.3
CANSAT54G0803 Cannabis sativa HOM05D008422 ORTHO05D000352 1.0e-48 196.8 130 75.4
CANSAT01G0535 Cannabis sativa HOM05D008422 ORTHO05D000352 4.6e-33 144.8 90 78.9
CANSAT80G1559 Cannabis sativa HOM05D008422 ORTHO05D000352 5.6e-31 137.9 91 74.7
CANSAT80G2507 Cannabis sativa HOM05D008422 ORTHO05D000352 9.0e-29 130.6 130 55.4
CANSAT78G0541 Cannabis sativa HOM05D019409 ORTHO05D000352 1.1e-26 123.6 78 75.6
CANSAT64G0046 Cannabis sativa HOM05D008422 ORTHO05D000352 2.1e-25 119.4 130 47.7
CANSAT21G2110 Cannabis sativa HOM05D008422 ORTHO05D000352 6.0e-25 117.9 129 45.7
CANSAT01G1361 Cannabis sativa HOM05D000429 ORTHO05D000352 4.0e-21 105.1 110 44.5
CANSAT11G1142 Cannabis sativa HOM05D008422 ORTHO05D000352 2.2e-19 99.4 78 62.8
CANSAT25G3092 Cannabis sativa HOM05D000429 ORTHO05D000352 4.9e-19 98.2 130 46.9
CANSAT56G0538 Cannabis sativa HOM05D012483 ORTHO05D000352 1.3e-14 83.6 119 36.1
CANSAT78G0316 Cannabis sativa HOM05D000429 ORTHO05D000352 1.6e-14 83.2 117 35.9
CANSAT56G0797 Cannabis sativa HOM05D000429 ORTHO05D000352 1.2e-12 77.0 129 30.2
CANSAT80G0171 Cannabis sativa HOM05D012483 ORTHO05D000880 7.6e-12 74.3 105 36.2
CANSAT71G0010 Cannabis sativa HOM05D012483 ORTHO05D000880 1.3e-11 73.6 107 35.5
CANSAT78G0921 Cannabis sativa HOM05D012483 ORTHO05D000880 2.9e-11 72.4 105 35.2
CANSAT56G1739 Cannabis sativa HOM05D009938 ORTHO05D000880 2.5e-10 69.3 128 29.7
CANSAT11G0599 Cannabis sativa HOM05D000429 ORTHO05D000352 4.2e-10 68.6 120 34.2
CANSAT35G1950 Cannabis sativa HOM05D000429 ORTHO05D000352 4.6e-09 65.1 103 31.1
vmacro05344 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 4.6e-09 65.1 119 30.3
vmacro05736 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 7.9e-09 64.3 119 29.4
vmacro22384 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 7.9e-09 64.3 119 29.4
vmacro03782 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 1.3e-08 63.5 119 29.4
vmacro04112 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 1.3e-08 63.5 119 29.4
vmacro04113 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 1.3e-08 63.5 119 29.4
vmacro04163 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 1.3e-08 63.5 119 29.4
vmacro10795 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 1.3e-08 63.5 119 29.4
vmacro22298 Vaccinium macrocarpon HOM05D002837 ORTHO05D000352 1.3e-08 63.5 119 29.4
vmacro12530 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 3.0e-08 62.4 119 28.6
QL05p012956 Quercus lobata HOM05D000047 ORTHO05D000044 3.9e-08 62.0 98 33.7
QL08p065228 Quercus lobata HOM05D000047 ORTHO05D000044 3.9e-08 62.0 98 33.7
QL11p049215 Quercus lobata HOM05D000047 ORTHO05D000044 3.9e-08 62.0 98 33.7
arahy.Tifrunner.gnm1.ann1.99K3J2 Arachis hypogaea HOM05D000047 ORTHO05D000044 5.1e-08 61.6 98 32.7
arahy.Tifrunner.gnm1.ann1.UC2LFY Arachis hypogaea HOM05D000429 ORTHO05D000352 5.1e-08 61.6 98 31.6
CANSAT54G2683 Cannabis sativa HOM05D000429 ORTHO05D000352 5.1e-08 61.6 43 69.8
Manes.14G150022 Manihot esculenta HOM05D000429 ORTHO05D000880 5.1e-08 61.6 105 30.5
Manes.18G025086 Manihot esculenta HOM05D000429 ORTHO05D000880 5.1e-08 61.6 100 33.0
arahy.Tifrunner.gnm1.ann1.2GNH2V Arachis hypogaea HOM05D000429 ORTHO05D000880 6.7e-08 61.2 96 32.3
TWI77G0163 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 8.7e-08 60.8 119 31.1
CANSAT50G0001 Cannabis sativa HOM05D008422 ORTHO05D000352 1.1e-07 60.5 44 59.1
Manes.10G076111 Manihot esculenta HOM05D000047 ORTHO05D000352 1.1e-07 60.5 100 33.0
Manes.18G056202 Manihot esculenta HOM05D000429 ORTHO05D000880 1.1e-07 60.5 100 33.0
MBI05_g41581_MAGBIO Magnolia biondii HOM05D001531 ORTHO05D004604 1.5e-07 60.1 98 32.7
CANSAT11G0966 Cannabis sativa HOM05D008422 ORTHO05D000352 1.9e-07 59.7 47 55.3
QL93p0205_0258 Quercus lobata HOM05D000047 ORTHO05D000044 2.5e-07 59.3 98 32.7
CANSAT01G0047 Cannabis sativa HOM05D008422 ORTHO05D000352 3.3e-07 58.9 129 28.7
CANSAT11G0771 Cannabis sativa HOM05D012483 ORTHO05D000352 4.3e-07 58.5 86 34.9
CANSAT80G1547 Cannabis sativa HOM05D008422 ORTHO05D000352 4.3e-07 58.5 129 27.9
MBI07_g06422_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 5.7e-07 58.2 99 29.3
QL05p030578 Quercus lobata HOM05D000047 ORTHO05D000044 9.7e-07 57.4 127 34.6
arahy.Tifrunner.gnm1.ann1.R1MCB0 Arachis hypogaea HOM05D000429 ORTHO05D000880 1.6e-06 56.6 99 29.3
CANSAT25G2709 Cannabis sativa HOM05D009938 ORTHO05D000880 1.6e-06 56.6 87 29.9
CANSAT25G1071 Cannabis sativa HOM05D008422 ORTHO05D000352 2.8e-06 55.8 129 26.4
CANSAT25G2094 Cannabis sativa HOM05D040811 ORTHO05D000880 2.8e-06 55.8 118 26.3
Oeu055455.1 Olea europaea HOM05D005901 ORTHO05D000880 2.8e-06 55.8 119 26.9
vmacro22445 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 3.7e-06 55.5 69 39.1
HanXRQChr10g0295011 Helianthus annuus HOM05D000047 ORTHO05D000044 4.8e-06 55.1 108 27.8
TPR.G38533 Trifolium pratense HOM05D009653 ORTHO05D011212 4.8e-06 55.1 82 36.6
Manes.02G203175 Manihot esculenta HOM05D000429 ORTHO05D000352 6.3e-06 54.7 100 30.0
TWI09G1035 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 8.2e-06 54.3 114 28.9
TWI23G0324 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 8.2e-06 54.3 114 28.9
TWI36G0915 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 8.2e-06 54.3 114 28.9
TWI36G1698 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 8.2e-06 54.3 114 28.9


User provided reference genes

Program Settings