Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2525 Cannabis sativa HOM05D009938 ORTHO05D000880 2.3e-111 405.6 209 100.0
CANSAT01G0191 Cannabis sativa HOM05D009938 ORTHO05D000880 1.4e-79 300.1 187 82.9
CANSAT11G2410 Cannabis sativa HOM05D009938 ORTHO05D000880 1.4e-71 273.5 187 75.4
CANSAT80G0151 Cannabis sativa HOM05D009938 ORTHO05D000880 6.8e-71 271.2 187 76.5
CANSAT11G1756 Cannabis sativa HOM05D009938 ORTHO05D000880 6.6e-66 254.6 174 76.4
CANSAT35G0387 Cannabis sativa HOM05D009938 ORTHO05D000880 3.3e-65 252.3 187 69.5
CANSAT01G2084 Cannabis sativa HOM05D009938 ORTHO05D000880 7.3e-65 251.1 205 67.3
CANSAT35G1297 Cannabis sativa HOM05D009938 ORTHO05D000880 1.2e-64 250.4 205 64.4
CANSAT64G1284 Cannabis sativa HOM05D009938 ORTHO05D000880 1.6e-64 250.0 177 72.9
CANSAT80G2143 Cannabis sativa HOM05D009938 ORTHO05D000880 6.8e-63 244.6 145 85.5
CANSAT25G2709 Cannabis sativa HOM05D009938 ORTHO05D000880 4.6e-59 231.9 205 61.5
CANSAT21G1066 Cannabis sativa HOM05D009938 ORTHO05D000880 7.8e-59 231.1 161 73.9
CANSAT21G0584 Cannabis sativa HOM05D009938 ORTHO05D000880 5.6e-57 224.9 187 63.6
CANSAT11G2221 Cannabis sativa HOM05D009938 ORTHO05D000880 8.1e-56 221.1 187 62.0
CANSAT25G0316 Cannabis sativa HOM05D009938 ORTHO05D000352 2.7e-51 206.1 208 57.2
CANSAT35G1472 Cannabis sativa HOM05D009938 ORTHO05D000880 4.0e-47 192.2 134 73.1
CANSAT56G1739 Cannabis sativa HOM05D009938 ORTHO05D000880 9.6e-41 171.0 155 61.9
CANSAT54G0908 Cannabis sativa HOM05D009938 ORTHO05D000880 3.6e-40 169.1 192 52.6
CANSAT56G0797 Cannabis sativa HOM05D000429 ORTHO05D000352 2.2e-29 133.3 138 51.4
CANSAT64G1863 Cannabis sativa HOM05D009938 ORTHO05D000880 2.2e-29 133.3 138 55.8
CANSAT11G1685 Cannabis sativa HOM05D009938 ORTHO05D000880 7.1e-28 128.3 168 45.2
QL93p0205_0258 Quercus lobata HOM05D000047 ORTHO05D000044 2.2e-13 80.1 169 33.1
QL05p012956 Quercus lobata HOM05D000047 ORTHO05D000044 3.2e-12 76.3 164 31.1
QL08p065228 Quercus lobata HOM05D000047 ORTHO05D000044 3.2e-12 76.3 164 31.1
QL11p049215 Quercus lobata HOM05D000047 ORTHO05D000044 5.5e-12 75.5 171 31.6
CANSAT80G0833 Cannabis sativa HOM05D040811 ORTHO05D000880 1.6e-11 73.9 127 34.6
CANSAT21G2110 Cannabis sativa HOM05D008422 ORTHO05D000352 2.1e-11 73.6 181 28.7
Oeu007675.1 Olea europaea HOM05D005901 ORTHO05D000880 6.1e-11 72.0 135 29.6
Lj5g0013972 Lotus japonicus HOM05D000429 ORTHO05D002578 7.9e-11 71.6 154 27.9
COL.COLO4_19353 Corchorus olitorius HOM05D000013 ORTHO05D000011 1.0e-10 71.2 101 34.7
DCAR_031974 Daucus carota HOM05D000429 ORTHO05D000352 1.0e-10 71.2 153 25.5
Oeu022520.1 Olea europaea HOM05D005901 ORTHO05D000880 1.0e-10 71.2 135 29.6
CANSAT25G0395 Cannabis sativa HOM05D000429 ORTHO05D000352 1.8e-10 70.5 196 26.5
COL.COLO4_08698 Corchorus olitorius HOM05D001436 ORTHO05D000880 2.3e-10 70.1 151 29.8
CANSAT54G0803 Cannabis sativa HOM05D008422 ORTHO05D000352 3.0e-10 69.7 160 29.4
QL07p045945 Quercus lobata HOM05D000047 ORTHO05D000044 3.9e-10 69.3 155 23.9
CANSAT01G1774 Cannabis sativa HOM05D008422 ORTHO05D000352 5.1e-10 68.9 173 30.1
Lj3g0010754 Lotus japonicus HOM05D000429 ORTHO05D000880 5.1e-10 68.9 154 27.3
Oeu014576.1 Olea europaea HOM05D005901 ORTHO05D000880 5.1e-10 68.9 135 28.9
CANSAT54G2836 Cannabis sativa HOM05D000429 ORTHO05D000352 6.7e-10 68.6 199 28.1
arahy.Tifrunner.gnm1.ann1.UC2LFY Arachis hypogaea HOM05D000429 ORTHO05D000352 8.7e-10 68.2 161 27.3
MBI09_g18084_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.5e-09 67.4 156 30.8
Oeu053585.1 Olea europaea HOM05D001436 ORTHO05D000880 1.9e-09 67.0 119 31.9
Oeu055455.1 Olea europaea HOM05D005901 ORTHO05D000880 1.9e-09 67.0 204 26.0
CANSAT35G1950 Cannabis sativa HOM05D000429 ORTHO05D000352 3.3e-09 66.2 155 25.8
TPR.G34595 Trifolium pratense HOM05D000429 ORTHO05D000880 3.3e-09 66.2 104 32.7
CANSAT71G0010 Cannabis sativa HOM05D012483 ORTHO05D000880 4.3e-09 65.9 127 28.3
arahy.Tifrunner.gnm1.ann1.99K3J2 Arachis hypogaea HOM05D000047 ORTHO05D000044 5.7e-09 65.5 161 26.7
MBI18_g41471_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.6e-08 63.9 154 29.2
CSS0022880 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 4.8e-08 62.4 211 24.6
ECA232G2642 Erigeron canadensis HOM05D000429 ORTHO05D000352 4.8e-08 62.4 158 27.8
CANSAT35G1884 Cannabis sativa HOM05D000429 ORTHO05D000880 8.2e-08 61.6 160 27.5
TWI09G1035 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 8.2e-08 61.6 168 26.2
TWI23G0324 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 8.2e-08 61.6 168 26.2
TWI36G0915 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 8.2e-08 61.6 168 26.2
TWI36G1698 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 8.2e-08 61.6 168 26.2
MBI01_g48011_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.1e-07 61.2 122 33.6
Manes.18G025086 Manihot esculenta HOM05D000429 ORTHO05D000880 1.1e-07 61.2 159 25.2
Oeu014351.1 Olea europaea HOM05D000047 ORTHO05D000044 1.1e-07 61.2 147 27.9
CANSAT01G1921 Cannabis sativa HOM05D000429 ORTHO05D000880 1.4e-07 60.8 123 30.9
TWI15G0819 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.4e-07 60.8 168 26.2
TWI38G0623 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.4e-07 60.8 168 26.2
CANSAT01G1361 Cannabis sativa HOM05D000429 ORTHO05D000352 1.8e-07 60.5 147 31.3
CSS0029770 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 2.4e-07 60.1 188 23.4
CANSAT56G0538 Cannabis sativa HOM05D012483 ORTHO05D000352 2.4e-07 60.1 133 27.1
CANSAT80G0171 Cannabis sativa HOM05D012483 ORTHO05D000880 2.4e-07 60.1 120 27.5
ECA234G4448 Erigeron canadensis HOM05D000429 ORTHO05D000880 2.4e-07 60.1 158 27.2
Manes.14G150022 Manihot esculenta HOM05D000429 ORTHO05D000880 2.4e-07 60.1 159 24.5
Oeu035291.1 Olea europaea HOM05D001436 ORTHO05D000880 2.4e-07 60.1 102 34.3
TWI14G0911 Tripterygium wilfordii HOM05D000429 ORTHO05D000880 2.4e-07 60.1 173 26.0
arahy.Tifrunner.gnm1.ann1.2GNH2V Arachis hypogaea HOM05D000429 ORTHO05D000880 3.1e-07 59.7 122 27.9
ECA247G2502 Erigeron canadensis HOM05D000047 ORTHO05D000044 3.1e-07 59.7 158 27.2
CANSAT11G1642 Cannabis sativa HOM05D040811 ORTHO05D000352 4.1e-07 59.3 139 30.2
ECA236G1050 Erigeron canadensis HOM05D000429 ORTHO05D000352 4.1e-07 59.3 158 26.6
ECA238G3134 Erigeron canadensis HOM05D000429 ORTHO05D000352 4.1e-07 59.3 158 25.3
MBI06_g07517_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 4.1e-07 59.3 158 27.8
Manes.18G056202 Manihot esculenta HOM05D000429 ORTHO05D000880 4.1e-07 59.3 159 24.5
Oeu012288.1 Olea europaea HOM05D005901 ORTHO05D000880 4.1e-07 59.3 171 26.3
Oeu057826.1 Olea europaea HOM05D000047 ORTHO05D000044 4.1e-07 59.3 163 25.8
TWI14G0816 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 4.1e-07 59.3 192 24.5
TWI53G1456 Tripterygium wilfordii HOM05D000429 ORTHO05D002449 4.1e-07 59.3 159 25.2
CSS0002549 Camellia sinensis var. sinensis HOM05D001436 ORTHO05D000880 5.3e-07 58.9 189 25.4
ECA246G3590 Erigeron canadensis HOM05D000047 ORTHO05D000044 5.3e-07 58.9 121 28.1
ECA247G2089 Erigeron canadensis HOM05D000047 ORTHO05D000044 5.3e-07 58.9 164 24.4
TWI75G1625 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 5.3e-07 58.9 192 24.5
ECA236G3805 Erigeron canadensis HOM05D000006 ORTHO05D000352 6.9e-07 58.5 158 26.6
ECA240G3470 Erigeron canadensis HOM05D000047 ORTHO05D000044 6.9e-07 58.5 158 26.6
TWI38G1293 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 6.9e-07 58.5 168 26.2
TWI63G1419 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 6.9e-07 58.5 168 25.6
ECA233G3481 Erigeron canadensis HOM05D000047 ORTHO05D000044 9.0e-07 58.2 121 27.3
ECA240G0821 Erigeron canadensis HOM05D003069 ORTHO05D002578 9.0e-07 58.2 122 27.0
HanXRQChr02g0044181 Helianthus annuus HOM05D003069 ORTHO05D002578 9.0e-07 58.2 156 28.2
ECA232G3359 Erigeron canadensis HOM05D000429 ORTHO05D000352 1.2e-06 57.8 158 25.9
ECA247G3028 Erigeron canadensis HOM05D003069 ORTHO05D002578 1.2e-06 57.8 121 28.1
ECA240G4278 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.5e-06 57.4 121 27.3
CANSAT80G0506 Cannabis sativa HOM05D056427 ORTHO05D000880 2.0e-06 57.0 61 47.5
ECA097G0001 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.0e-06 57.0 158 26.6
ECA234G2506 Erigeron canadensis HOM05D000047 ORTHO05D002578 2.0e-06 57.0 121 27.3
ECA240G4216 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.0e-06 57.0 123 28.5
ECA246G1600 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.0e-06 57.0 174 25.3
Manes.10G076111 Manihot esculenta HOM05D000047 ORTHO05D000352 2.0e-06 57.0 130 28.5
Oeu012009.1 Olea europaea HOM05D005901 ORTHO05D000880 2.0e-06 57.0 113 30.1
ECA232G4948 Erigeron canadensis HOM05D003069 ORTHO05D002578 2.6e-06 56.6 121 27.3
ECA234G0304 Erigeron canadensis HOM05D000047 ORTHO05D000044 2.6e-06 56.6 122 27.0
HanXRQChr10g0295011 Helianthus annuus HOM05D000047 ORTHO05D000044 2.6e-06 56.6 156 28.2
TWI75G0769 Tripterygium wilfordii HOM05D000429 ORTHO05D000880 2.6e-06 56.6 119 32.8
ECA232G1836 Erigeron canadensis HOM05D000429 ORTHO05D000352 3.4e-06 56.2 154 26.0
ECA246G2481 Erigeron canadensis HOM05D000429 ORTHO05D000352 3.4e-06 56.2 158 26.6
Manes.02G203175 Manihot esculenta HOM05D000429 ORTHO05D000352 3.4e-06 56.2 159 24.5
TWI14G1011 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 3.4e-06 56.2 168 25.0
ECA247G2301 Erigeron canadensis HOM05D000006 ORTHO05D000044 4.5e-06 55.8 125 29.6
Dinv10786 Davidia involucrata HOM05D000047 ORTHO05D000589 5.9e-06 55.5 116 29.3
ECA233G0109 Erigeron canadensis HOM05D003069 ORTHO05D002578 5.9e-06 55.5 166 24.7
ECA234G3473 Erigeron canadensis HOM05D000047 ORTHO05D000044 5.9e-06 55.5 174 24.7
ECA247G3761 Erigeron canadensis HOM05D003069 ORTHO05D002578 5.9e-06 55.5 174 24.1
Sopen11g016120 Solanum pennellii HOM05D000047 ORTHO05D000044 5.9e-06 55.5 120 29.2
TWI38G1491 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 5.9e-06 55.5 137 26.3
ECA233G5499 Erigeron canadensis HOM05D000006 ORTHO05D000352 7.7e-06 55.1 158 27.2
ECA234G2950 Erigeron canadensis HOM05D000047 ORTHO05D000044 7.7e-06 55.1 154 25.3
ECA240G4747 Erigeron canadensis HOM05D003069 ORTHO05D002578 7.7e-06 55.1 166 24.7
ECA246G0118 Erigeron canadensis HOM05D000047 ORTHO05D000044 7.7e-06 55.1 154 26.0
MBI15_g44888_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 7.7e-06 55.1 99 33.3
TWI59G1479 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 7.7e-06 55.1 168 25.0
ECA232G1596 Erigeron canadensis HOM05D000429 ORTHO05D000352 1.0e-05 54.7 158 25.3
ECA234G4750 Erigeron canadensis HOM05D003069 ORTHO05D002578 1.0e-05 54.7 121 25.6
Oeu033492.1 Olea europaea HOM05D000047 ORTHO05D008058 1.0e-05 54.7 183 23.5


User provided reference genes

Program Settings