Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2476 Cannabis sativa HOM05D007320 ORTHO05D009290 6.2e-170 600.9 346 100.0
Prupe.3G125800 Prunus persica HOM05D007320 ORTHO05D009290 5.7e-107 391.7 346 70.2
Atru.chr6.2840 Acer truncatum HOM05D007320 ORTHO05D009290 2.2e-106 389.8 346 60.7
GSVIVG01020656001 Vitis vinifera HOM05D007320 ORTHO05D009290 1.6e-104 383.6 346 66.5
Dinv15897 Davidia involucrata HOM05D007320 ORTHO05D009290 2.7e-104 382.9 346 67.1
FAN10G4046 Fragaria x ananassa HOM05D007320 ORTHO05D009290 5.5e-102 375.2 346 66.8
FAN10G1335 Fragaria x ananassa HOM05D007320 ORTHO05D009290 7.2e-102 374.8 346 66.2
FAN03G0990 Fragaria x ananassa HOM05D007320 ORTHO05D009290 2.1e-101 373.2 344 66.0
Haze_13306 Corylus avellana HOM05D007320 ORTHO05D009290 3.6e-101 372.5 341 65.7
FvH4_7g08410 Fragaria vesca HOM05D007320 ORTHO05D009290 3.6e-101 372.5 346 66.2
MD09G1241100 Malus domestica HOM05D007320 ORTHO05D009290 8.0e-101 371.3 348 66.7
Cfa014690 Carpinus fangiana HOM05D007320 ORTHO05D009290 4.0e-100 369.0 344 65.1
CiPaw.04G130300 Carya illinoinensis HOM05D007320 ORTHO05D009290 4.0e-100 369.0 346 57.8
Ciclev10017507m.g Citrus clementina HOM05D007320 ORTHO05D009290 6.8e-100 368.2 346 57.2
Hma1.2p1_0002F.1_g002500 Hydrangea macrophylla HOM05D007320 ORTHO05D009290 3.4e-99 365.9 347 64.8
Lalb_Chr25g0279081 Lupinus albus HOM05D007320 ORTHO05D009290 3.4e-99 365.9 346 62.1
RcHm_v2.0_Chr0c20g0500221 Rosa chinensis HOM05D007320 ORTHO05D009290 1.4e-97 360.5 346 64.2
Manes.13G139600 Manihot esculenta HOM05D007320 ORTHO05D009290 3.1e-97 359.4 347 58.2
TWI59G0750 Tripterygium wilfordii HOM05D007320 ORTHO05D009290 9.1e-97 357.8 346 56.6
Lj1P690T28 Lonicera japonica HOM05D007320 ORTHO05D009290 2.7e-96 356.3 346 64.2
Medtr2g090885 Medicago truncatula HOM05D007320 ORTHO05D009290 1.7e-95 353.6 345 61.4
Glyma.12G208100 Glycine max HOM05D007320 ORTHO05D009290 2.3e-95 353.2 320 59.1
VMungo1080G0443 Vigna mungo HOM05D007320 ORTHO05D009290 5.0e-95 352.1 346 54.6
CSS0012636 Camellia sinensis var. sinensis HOM05D007320 ORTHO05D009290 8.6e-95 351.3 346 62.4
Dinv19981 Davidia involucrata HOM05D007320 ORTHO05D009290 8.6e-95 351.3 309 69.3
TAR627G0001 Trochodendron aralioides HOM05D007320 ORTHO05D009290 8.6e-95 351.3 351 64.4
Actinidia11122 Actinidia chinensis HOM05D007320 ORTHO05D009290 1.1e-94 350.9 346 54.3
Sabra13G0103100 Salix brachista HOM05D007320 ORTHO05D009290 1.1e-94 350.9 346 64.7
Lj3g0010689 Lotus japonicus HOM05D007320 ORTHO05D009290 1.9e-94 350.1 335 63.9
Rhsim06G0135200 Rhododendron simsii HOM05D007320 ORTHO05D009290 1.6e-93 347.1 346 62.1
Ca_01474_v3 Cicer arietinum L. HOM05D007320 ORTHO05D009290 2.3e-92 343.2 335 59.4
Potri.013G124100 Populus trichocarpa HOM05D007320 ORTHO05D009290 8.9e-92 341.3 341 64.2
Phvul.005G098950 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 1.5e-91 340.5 346 53.8
vmacro12358 Vaccinium macrocarpon HOM05D007320 ORTHO05D009290 2.0e-91 340.1 341 60.7
Gorai.009G266400 Gossypium raimondii HOM05D007320 ORTHO05D009290 4.9e-90 335.5 346 54.3
Nn3g20750 Nelumbo nucifera HOM05D007320 ORTHO05D009290 4.9e-90 335.5 350 52.9
Gohir.D05G254900 Gossypium hirsutum HOM05D007320 ORTHO05D009290 8.3e-90 334.7 346 53.8
Sed0016711 Sechium edule HOM05D007320 ORTHO05D009290 3.1e-89 332.8 335 63.0
ClCG02G009070 Citrullus lanatus HOM05D007320 ORTHO05D009290 4.1e-89 332.4 344 53.8
Gohir.A05G253000 Gossypium hirsutum HOM05D007320 ORTHO05D009290 5.4e-89 332.0 346 53.8
TPR.G6440 Trifolium pratense HOM05D007320 ORTHO05D009290 1.2e-88 330.9 333 62.2
Thecc.08G174300 Theobroma cacao HOM05D007320 ORTHO05D009290 4.5e-88 328.9 346 61.3
Nitab4.5_0001895g0020 Nicotiana tabacum HOM05D007320 ORTHO05D009290 5.9e-88 328.6 300 55.0
Cpa.g.sc209.6 Carica papaya HOM05D007320 ORTHO05D009290 5.0e-87 325.5 338 53.8
Sopen01g035350 Solanum pennellii HOM05D007320 ORTHO05D009290 8.6e-87 324.7 319 53.9
Psat5g275040 Pisum sativum HOM05D007320 ORTHO05D009290 1.1e-86 324.3 339 60.8
Hund07849 Selenicereus undatus HOM05D007320 ORTHO05D009290 2.5e-86 323.2 323 52.0
Cc05_g07980 Coffea canephora HOM05D007320 ORTHO05D009290 3.3e-86 322.8 341 51.3
CsaV3_2G004500 Cucumis sativus L. HOM05D007320 ORTHO05D009290 5.6e-86 322.0 346 52.0
AT1G06270 Arabidopsis thaliana HOM05D007320 ORTHO05D009290 1.2e-85 320.9 349 61.0
Solyc01g088490.3 Solanum lycopersicum HOM05D007320 ORTHO05D009290 2.8e-85 319.7 332 52.7
Thhalv10008110m.g Eutrema salsugineum HOM05D007320 ORTHO05D009290 3.6e-85 319.3 349 60.5
PGSC0003DMG400001712 Solanum tuberosum HOM05D007320 ORTHO05D009290 3.6e-85 319.3 334 52.4
THA.LOC104800856 Tarenaya hassleriana HOM05D007320 ORTHO05D009290 3.6e-85 319.3 346 60.7
CAN.G756.7 Capsicum annuum HOM05D007320 ORTHO05D009290 4.7e-85 318.9 319 53.0
Carub.0001s0564 Capsella rubella HOM05D007320 ORTHO05D009290 1.0e-84 317.8 349 61.0
CARHR005830 Cardamine hirsuta HOM05D007320 ORTHO05D009290 3.0e-84 316.2 346 59.8
COL.COLO4_26851 Corchorus olitorius HOM05D007320 ORTHO05D009290 3.0e-84 316.2 346 55.5
AL1G16280 Arabidopsis lyrata HOM05D007320 ORTHO05D009290 5.2e-84 315.5 346 60.1
Oeu000571.1 Olea europaea HOM05D007320 ORTHO05D009290 6.8e-84 315.1 346 56.1
Sp1g05080 Schrenkiella parvula HOM05D007320 ORTHO05D009290 6.8e-84 315.1 320 63.1
Nitab4.5_0008210g0010 Nicotiana tabacum HOM05D007320 ORTHO05D009290 3.4e-83 312.8 312 51.9
BolC5t29229H Brassica oleracea HOM05D007320 ORTHO05D009290 5.8e-83 312.0 346 59.8
BcaB02g06809 Brassica carinata HOM05D007320 ORTHO05D009290 7.5e-83 311.6 346 60.1
C05p04580 Brassica napus HOM05D007320 ORTHO05D009290 7.5e-83 311.6 346 60.1
BcaC05g24288 Brassica carinata HOM05D007320 ORTHO05D009290 1.3e-82 310.8 346 59.8
EL10Ac2g02568 Beta vulgaris HOM05D007320 ORTHO05D009290 2.2e-82 310.1 342 59.1
Aa31LG1G7290 Aethionema arabicum HOM05D007320 ORTHO05D009290 2.9e-82 309.7 349 57.0
A10p04990 Brassica napus HOM05D007320 ORTHO05D009290 8.3e-82 308.1 346 59.0
BraA10t42760Z Brassica rapa HOM05D007320 ORTHO05D009290 8.3e-82 308.1 346 59.0
AUR62035379 Chenopodium quinoa HOM05D007320 ORTHO05D009290 2.4e-81 306.6 344 57.3
MSTRG.20317 Avicennia marina HOM05D007320 ORTHO05D009290 3.2e-81 306.2 323 52.0
Migut.L01118 Erythranthe guttata HOM05D007320 ORTHO05D009290 7.0e-81 305.1 321 52.3
Sc07g0005270 Simmondsia chinensis HOM05D007320 ORTHO05D009290 1.2e-80 304.3 350 58.3
HanXRQChr17g0565321 Helianthus annuus HOM05D007320 ORTHO05D009290 7.8e-80 301.6 346 47.1
DCAR_013053 Daucus carota HOM05D007320 ORTHO05D009290 1.2e-77 294.3 320 56.9
Migut.C00284 Erythranthe guttata HOM05D007320 ORTHO05D009290 1.6e-77 293.9 321 51.7
ECA234G2345 Erigeron canadensis HOM05D007320 ORTHO05D009290 2.1e-77 293.5 346 47.1
Eucgr.F01954 Eucalyptus grandis HOM05D007320 ORTHO05D009290 2.1e-77 293.5 346 56.9
SGA_v2.0_scaffold313G48283 Striga asiatica HOM05D007320 ORTHO05D009290 3.6e-77 292.7 317 50.5
Migut.D01592 Erythranthe guttata HOM05D007320 ORTHO05D009290 6.2e-77 292.0 321 51.4
SalBow8G4737 Salvia bowleyana HOM05D007320 ORTHO05D009290 9.2e-73 278.1 322 48.1
MBI06_g25716_MAGBIO Magnolia biondii HOM05D007320 ORTHO05D009290 1.3e-71 274.2 326 49.4
SalBow8G5340 Salvia bowleyana HOM05D007320 ORTHO05D009290 5.1e-71 272.3 322 47.5
Lsat_1_v5_gn_4_28301 Lactuca sativa HOM05D007320 ORTHO05D009290 8.6e-71 271.6 319 46.4
Peaxi162Scf00745g00038 Petunia axillaris HOM05D007320 ORTHO05D009290 1.9e-70 270.4 317 46.7
SHI10502 Sapria himalayana HOM05D007320 ORTHO05D009290 8.1e-69 265.0 314 56.1
PGR083G2305 Punica granatum HOM05D007320 ORTHO05D009290 1.9e-65 253.8 347 54.8
unitig_62.g23164 Utricularia gibba HOM05D007320 ORTHO05D009290 3.5e-64 249.6 324 43.8
TPR.G5736 Trifolium pratense HOM05D007320 ORTHO05D009290 1.9e-62 243.8 268 48.1
AUR62024073 Chenopodium quinoa HOM05D007320 ORTHO05D009290 4.7e-61 239.2 232 66.8
TPR.G34643 Trifolium pratense HOM05D007320 ORTHO05D009290 9.3e-49 198.4 183 55.2
MELO3C004341.2 Cucumis melo HOM05D007320 ORTHO05D009290 1.9e-46 190.7 244 45.9
Phvul.005G098533 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 1.5e-43 181.0 187 54.0
arahy.Tifrunner.gnm1.ann1.CSM94Q Arachis hypogaea HOM05D007320 ORTHO05D009290 2.7e-40 170.2 161 54.0
arahy.Tifrunner.gnm1.ann1.66V1NK Arachis hypogaea HOM05D007320 ORTHO05D009290 8.1e-37 158.7 162 51.2
Cpa.g.sc209.4 Carica papaya HOM05D007320 ORTHO05D009290 4.2e-33 146.4 171 49.7
Dinv15900 Davidia involucrata HOM05D007320 ORTHO05D009290 1.3e-29 134.8 183 59.0
PGSC0003DMG401001710 Solanum tuberosum HOM05D007320 ORTHO05D009290 2.1e-29 134.0 113 61.1
Sc21g0003340 Simmondsia chinensis HOM05D007320 ORTHO05D009290 2.6e-27 127.1 99 62.6
Sc21g0003330 Simmondsia chinensis HOM05D007320 ORTHO05D009290 2.9e-26 123.6 193 41.5
SalBow7G0970 Salvia bowleyana HOM05D000555 ORTHO05D000646 1.4e-17 94.7 105 46.7
arahy.Tifrunner.gnm1.ann1.5PR57S Arachis hypogaea HOM05D007320 ORTHO05D009290 1.5e-14 84.7 103 47.6
MELO3C021360.2 Cucumis melo HOM05D007320 ORTHO05D009290 2.0e-11 74.3 114 41.2
Peaxi162Scf00102g01049 Petunia axillaris HOM05D007320 ORTHO05D009290 6.5e-10 69.3 79 49.4


User provided reference genes

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