Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2446 Cannabis sativa HOM05D006689 ORTHO05D008349 2.4e-198 695.3 349 100.0
MD14G1035800 Malus domestica HOM05D006689 ORTHO05D008349 1.4e-124 450.3 347 66.6
GSVIVG01033928001 Vitis vinifera HOM05D006689 ORTHO05D008349 2.3e-124 449.5 334 65.3
TAR633G1471 Trochodendron aralioides HOM05D006689 ORTHO05D008349 3.7e-122 442.2 347 62.5
QL07p037495 Quercus lobata HOM05D006689 ORTHO05D008349 1.1e-121 440.7 335 66.6
Prupe.7G098300 Prunus persica HOM05D006689 ORTHO05D008349 9.2e-121 437.6 343 65.9
FvH4_6g19910 Fragaria vesca HOM05D006689 ORTHO05D008349 1.2e-117 427.2 300 68.0
TWI74G1155 Tripterygium wilfordii HOM05D006689 ORTHO05D008349 1.2e-117 427.2 320 66.6
Atru.chr8.1397 Acer truncatum HOM05D006689 ORTHO05D008349 2.1e-117 426.4 313 66.5
PGR004G2039 Punica granatum HOM05D006689 ORTHO05D008349 2.8e-117 426.0 346 61.6
Psat3g030240 Pisum sativum HOM05D006689 ORTHO05D008349 8.0e-117 424.5 347 60.8
CSS0035173 Camellia sinensis var. sinensis HOM05D006689 ORTHO05D008349 1.8e-116 423.3 301 66.4
QL07p037513 Quercus lobata HOM05D006689 ORTHO05D008349 1.8e-116 423.3 310 66.8
TPR.G23318 Trifolium pratense HOM05D006689 ORTHO05D008349 1.2e-115 420.6 343 61.5
Cpa.g.sc104.62 Carica papaya HOM05D006689 ORTHO05D008349 4.9e-114 415.2 323 63.2
Lalb_Chr20g0111471 Lupinus albus HOM05D006689 ORTHO05D008349 1.8e-113 413.3 301 65.1
Lj1g0003895 Lotus japonicus HOM05D006689 ORTHO05D008349 3.2e-113 412.5 301 66.1
Duzib106G1273 Durio zibethinus HOM05D006689 ORTHO05D008349 5.4e-113 411.8 340 60.6
Hma1.2p1_0064F.1_g034840 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 1.6e-112 410.2 299 65.9
Aa31LG3G5030 Aethionema arabicum HOM05D006689 ORTHO05D008349 5.9e-112 408.3 331 61.6
CARHR086170 Cardamine hirsuta HOM05D006689 ORTHO05D008349 1.7e-111 406.8 306 63.7
Potri.016G072700 Populus trichocarpa HOM05D006689 ORTHO05D008349 1.7e-111 406.8 305 64.6
CiPaw.09G018700 Carya illinoinensis HOM05D006689 ORTHO05D008349 6.6e-111 404.8 341 60.7
Aqoxy4G02685 Aquilegia oxysepala HOM05D006689 ORTHO05D008349 8.6e-111 404.4 345 58.3
Nn6g34760 Nelumbo nucifera HOM05D006689 ORTHO05D008349 8.6e-111 404.4 322 59.6
Lalb_Chr01g0017911 Lupinus albus HOM05D006689 ORTHO05D008349 1.9e-110 403.3 339 59.9
Actinidia32058 Actinidia chinensis HOM05D006689 ORTHO05D008349 3.3e-110 402.5 301 64.5
Cc06_g06350 Coffea canephora HOM05D006689 ORTHO05D008349 5.6e-110 401.7 312 60.9
Sp3g09850 Schrenkiella parvula HOM05D006689 ORTHO05D008349 6.2e-109 398.3 303 62.7
Eucgr.A02606 Eucalyptus grandis HOM05D006689 ORTHO05D008349 1.0e-108 397.5 315 60.0
AL3G23170 Arabidopsis lyrata HOM05D006689 ORTHO05D008349 1.4e-108 397.1 303 62.7
Thhalv10021180m.g Eutrema salsugineum HOM05D006689 ORTHO05D008349 1.8e-108 396.7 305 61.3
Carub.0003s1094 Capsella rubella HOM05D006689 ORTHO05D008349 2.3e-108 396.4 344 57.3
FAN14G3242 Fragaria x ananassa HOM05D006689 ORTHO05D008349 4.0e-108 395.6 300 64.3
MD12G1034600 Malus domestica HOM05D006689 ORTHO05D008349 1.5e-107 393.7 287 67.6
Cfa016668 Carpinus fangiana HOM05D006689 ORTHO05D008349 2.6e-107 392.9 311 62.7
FAN05G1672 Fragaria x ananassa HOM05D006689 ORTHO05D008349 3.4e-107 392.5 300 64.0
Sc07g0005680 Simmondsia chinensis HOM05D006689 ORTHO05D008349 7.5e-107 391.3 347 56.2
BcaB04g18654 Brassica carinata HOM05D006689 ORTHO05D008349 1.3e-106 390.6 299 61.2
FAN02G4476 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.3e-106 390.6 328 60.4
AT3G11620 Arabidopsis thaliana HOM05D006689 ORTHO05D008349 3.7e-106 389.0 283 65.4
CsaV3_6G040970 Cucumis sativus L. HOM05D006689 ORTHO05D008349 6.4e-106 388.3 337 54.0
C05p56320 Brassica napus HOM05D006689 ORTHO05D008349 1.4e-105 387.1 303 61.4
BraA05t22567Z Brassica rapa HOM05D006689 ORTHO05D008349 3.2e-105 386.0 303 60.7
Sopen01g003330 Solanum pennellii HOM05D006689 ORTHO05D008349 7.0e-105 384.8 299 61.9
A03p37220 Brassica napus HOM05D006689 ORTHO05D008349 9.2e-105 384.4 320 58.1
Gorai.009G398000 Gossypium raimondii HOM05D006689 ORTHO05D008349 1.2e-104 384.0 338 57.7
BcaC01g04099 Brassica carinata HOM05D006689 ORTHO05D008349 1.6e-104 383.6 303 60.4
BraA03t12881Z Brassica rapa HOM05D006689 ORTHO05D008349 3.5e-104 382.5 301 61.1
A05p37720 Brassica napus HOM05D006689 ORTHO05D008349 4.6e-104 382.1 303 60.7
PSO384G4437 Papaver somniferum HOM05D006689 ORTHO05D008349 6.0e-104 381.7 349 53.9
Solyc01g007790.4 Solanum lycopersicum HOM05D006689 ORTHO05D008349 6.0e-104 381.7 321 58.9
Ciclev10011965m.g Citrus clementina HOM05D006689 ORTHO05D008349 1.0e-103 380.9 325 56.9
BolC5t34296H Brassica oleracea HOM05D006689 ORTHO05D008349 1.3e-103 380.6 283 63.6
PSO339G4581 Papaver somniferum HOM05D006689 ORTHO05D008349 1.1e-102 377.5 304 56.9
Oeu017715.1 Olea europaea HOM05D006689 ORTHO05D008349 4.3e-102 375.6 346 55.5
C03p45070 Brassica napus HOM05D006689 ORTHO05D008349 9.5e-102 374.4 305 59.0
BcaB06g25602 Brassica carinata HOM05D006689 ORTHO05D008349 4.0e-100 369.0 307 58.3
DCAR_013430 Daucus carota HOM05D006689 ORTHO05D008349 5.2e-100 368.6 348 54.6
HPP92_023075 Vanilla planifolia HOM05D006689 ORTHO05D008349 3.7e-98 362.5 298 58.4
Phvul.001G194040 Phaseolus vulgaris HOM05D006689 ORTHO05D008349 1.1e-97 360.9 279 63.4
HanXRQChr13g0398201 Helianthus annuus HOM05D006689 ORTHO05D008349 2.4e-97 359.8 309 55.3
BcaC05g29349 Brassica carinata HOM05D006689 ORTHO05D008349 4.1e-97 359.0 281 61.2
arahy.Tifrunner.gnm1.ann1.YAPI8V Arachis hypogaea HOM05D006689 ORTHO05D008349 1.2e-96 357.5 300 57.3
Zm00001eb362600 Zea mays HOM05D006689 ORTHO05D008349 2.7e-96 356.3 297 57.2
MBI17_g00993_MAGBIO Magnolia biondii HOM05D006689 ORTHO05D008349 8.6e-95 351.3 302 57.0
FAN09G0196 Fragaria x ananassa HOM05D006689 ORTHO05D008349 9.5e-94 347.8 434 46.1
ClCG04G010350 Citrullus lanatus HOM05D006689 ORTHO05D008349 8.1e-93 344.7 308 53.9
Nitab4.5_0000665g0040 Nicotiana tabacum HOM05D006689 ORTHO05D008349 1.8e-92 343.6 316 54.4
Sed0011891 Sechium edule HOM05D006689 ORTHO05D008349 1.8e-92 343.6 261 60.5
Haze_19679 Corylus avellana HOM05D006689 ORTHO05D008349 2.6e-91 339.7 346 53.8
ECA233G1524 Erigeron canadensis HOM05D006689 ORTHO05D008349 2.9e-90 336.3 285 55.8
Rhsim03G0067100 Rhododendron simsii HOM05D006689 ORTHO05D008349 3.8e-90 335.9 469 42.0
SEGI_26711 Sequoiadendron giganteum HOM05D006689 ORTHO05D008349 1.9e-89 333.6 294 53.4
Medtr7g105800 Medicago truncatula HOM05D006689 ORTHO05D008349 7.1e-89 331.6 242 66.5
ATR0772G132 Amborella trichopoda HOM05D006689 ORTHO05D008349 2.1e-88 330.1 274 56.9
Peaxi162Scf00419g00069 Petunia axillaris HOM05D006689 ORTHO05D008349 1.9e-86 323.6 322 53.1
FAN05G0890 Fragaria x ananassa HOM05D006689 ORTHO05D008349 3.3e-86 322.8 258 62.4
Lsat_1_v5_gn_6_35180 Lactuca sativa HOM05D006689 ORTHO05D008349 3.3e-86 322.8 286 55.2
RcHm_v2.0_Chr3g0475311 Rosa chinensis HOM05D006689 ORTHO05D008349 4.3e-86 322.4 239 66.5
arahy.Tifrunner.gnm1.ann1.ZIE5B9 Arachis hypogaea HOM05D006689 ORTHO05D008349 5.6e-86 322.0 303 53.5
Migut.L01819 Erythranthe guttata HOM05D006689 ORTHO05D008349 9.9e-83 311.2 234 62.8
Gohir.D04G095300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 4.2e-81 305.8 249 60.2
Pp3c13_7330 Physcomitrium patens HOM05D006689 ORTHO05D008349 1.1e-78 297.7 307 45.3
Sabra16G0075500 Salix brachista HOM05D006689 ORTHO05D008349 4.3e-78 295.8 344 48.5
Nitab4.5_0000020g0370 Nicotiana tabacum HOM05D006689 ORTHO05D008349 3.6e-77 292.7 235 58.7
Manes.09G048600 Manihot esculenta HOM05D006689 ORTHO05D008349 9.3e-73 278.1 215 62.8
SalBow5G2063 Salvia bowleyana HOM05D006689 ORTHO05D008349 3.9e-71 272.7 340 45.6
CAN.G574.36 Capsicum annuum HOM05D006689 ORTHO05D008349 5.1e-71 272.3 210 61.0
Hma1.2p1_0064F.1_g034850 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 5.3e-68 262.3 202 63.9
SMO272G0021 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 9.9e-67 258.1 281 44.5
Thecc.05G100700 Theobroma cacao HOM05D006689 ORTHO05D008349 1.2e-64 251.1 209 61.2
SMO165G0131 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 3.3e-62 243.0 312 40.4
CDE02G4301 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 2.5e-57 226.9 176 60.8
Hund19873 Selenicereus undatus HOM05D006689 ORTHO05D008349 7.9e-56 221.9 302 43.0
AUR62037035 Chenopodium quinoa HOM05D006689 ORTHO05D008349 3.9e-55 219.5 195 55.4
AUR62006266 Chenopodium quinoa HOM05D006689 ORTHO05D008349 1.9e-54 217.2 195 55.4
MELO3C024575.2 Cucumis melo HOM05D006689 ORTHO05D008349 5.7e-54 215.7 319 40.8
Glyma.03G200300 Glycine max HOM05D006689 ORTHO05D008349 2.2e-50 203.8 150 63.3
EL10Ac7g16816 Beta vulgaris HOM05D006689 ORTHO05D008349 4.2e-49 199.5 162 59.3
PGSC0003DMG400016416 Solanum tuberosum HOM05D006689 ORTHO05D008349 7.9e-48 195.3 145 62.8
Glyma.19G197900 Glycine max HOM05D006689 ORTHO05D008349 1.3e-45 188.0 308 35.1
unitig_22.g6018 Utricularia gibba HOM05D006689 ORTHO05D008349 3.8e-42 176.4 185 45.4
vmacro07460 Vaccinium macrocarpon HOM05D006689 ORTHO05D008349 1.4e-41 174.5 432 32.2
BolC3t16769H Brassica oleracea HOM05D006689 ORTHO05D008349 2.1e-40 170.6 126 61.1
Gohir.A04G061300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 3.9e-39 166.4 102 70.6
Gohir.A04G061585 Gossypium hirsutum HOM05D006689 ORTHO05D008349 1.7e-37 161.0 167 50.3
SGA_v2.0_scaffold184G40008 Striga asiatica HOM05D006689 ORTHO05D008349 1.8e-31 141.0 99 61.6
COL.COLO4_29616 Corchorus olitorius HOM05D006689 ORTHO05D008349 3.3e-30 136.7 87 67.8
Aa31LG3G5020 Aethionema arabicum HOM05D006689 ORTHO05D008349 5.0e-26 122.9 86 62.8
Ah.08g210180 Amaranthus hybridus HOM05D006689 ORTHO05D008349 1.1e-25 121.7 76 68.4
CDE02G1185 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 3.2e-25 120.2 88 62.5
Cre09.g388319 Chlamydomonas reinhardtii HOM05D006689 ORTHO05D008349 8.0e-24 115.5 333 28.5
Actinidia03903 Actinidia chinensis HOM05D006689 ORTHO05D008349 5.7e-22 109.4 137 46.0
MCO04G525 Micromonas commoda HOM05D006689 ORTHO05D008349 5.7e-22 109.4 249 28.1
PRCOL_00001274 Prasinoderma coloniale HOM05D006689 ORTHO05D008349 2.0e-19 100.9 289 26.3
RcHm_v2.0_Chr3g0475321 Rosa chinensis HOM05D006689 ORTHO05D008349 5.5e-17 92.8 74 59.5
Sabra16G0075600 Salix brachista HOM05D006689 ORTHO05D008349 8.6e-10 68.9 43 72.1
Hma1.2p1_1624F.1_g294270 Hydrangea macrophylla HOM05D000554 ORTHO05D000860 1.1e-09 68.6 48 62.5
Hund19874 Selenicereus undatus HOM05D006689 ORTHO05D008349 8.9e-07 58.9 40 62.5
arahy.Tifrunner.gnm1.ann1.HW4B1R Arachis hypogaea HOM05D006689 ORTHO05D008349 5.7e-06 56.2 67 38.8
Cfa021542 Carpinus fangiana HOM05D000750 ORTHO05D011662 7.5e-06 55.8 65 47.7


User provided reference genes

Program Settings