Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 2.6e-303 1044.6 564 100.0
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 3.2e-232 808.5 571 78.3
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 4.6e-231 804.7 571 77.9
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 3.0e-230 802.0 567 77.2
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 3.9e-230 801.6 569 77.0
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 1.5e-229 799.7 558 78.5
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.4e-227 793.1 564 76.2
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 6.9e-227 790.8 564 75.5
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 9.0e-227 790.4 567 76.0
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 1.2e-226 790.0 553 78.5
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 1.5e-226 789.6 564 75.9
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 2.6e-226 788.9 566 75.4
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.4e-226 788.5 566 75.6
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 7.6e-226 787.3 565 75.2
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.3e-225 786.6 566 75.4
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 1.1e-224 783.5 571 75.8
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.6e-223 779.6 566 74.6
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.7e-223 778.9 580 73.4
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 2.7e-223 778.9 571 73.6
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 1.5e-221 773.1 571 73.0
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 9.6e-221 770.4 568 73.1
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 9.6e-221 770.4 565 75.6
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 2.1e-220 769.2 565 73.6
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 6.2e-220 767.7 565 74.2
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 4.0e-219 765.0 571 72.9
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 1.5e-218 763.1 570 73.3
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 4.9e-217 758.1 576 72.9
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 1.9e-216 756.1 572 71.7
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 2.1e-215 752.7 569 72.1
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 4.6e-215 751.5 564 71.8
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 6.7e-214 747.7 564 70.9
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 4.3e-213 745.0 570 71.2
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 5.7e-213 744.6 564 71.8
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 2.4e-211 739.2 571 70.4
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 6.9e-211 737.6 567 71.1
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 1.5e-210 736.5 573 70.5
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 4.5e-210 734.9 566 71.0
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 7.6e-210 734.2 566 69.4
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 1.3e-209 733.4 575 71.3
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 1.1e-208 730.3 570 70.5
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 2.7e-207 725.7 569 71.0
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 7.9e-207 724.2 570 68.9
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 7.9e-207 724.2 569 68.9
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 1.0e-206 723.8 571 70.1
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 1.0e-206 723.8 570 70.5
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 8.8e-206 720.7 570 70.2
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 1.9e-205 719.5 570 69.3
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 3.3e-205 718.8 566 70.3
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 7.4e-205 717.6 566 69.6
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 2.2e-204 716.1 565 69.6
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 6.9e-203 711.1 642 63.2
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 9.1e-203 710.7 592 66.6
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 1.5e-202 709.9 568 68.1
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 2.0e-202 709.5 572 68.7
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 1.1e-200 703.7 568 65.7
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 5.5e-200 701.4 565 68.0
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 1.2e-199 700.3 567 67.9
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 7.9e-199 697.6 570 68.6
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 2.3e-198 696.0 565 69.7
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 3.0e-198 695.7 568 65.5
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 3.9e-198 695.3 566 67.1
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 8.8e-198 694.1 567 66.7
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 1.1e-197 693.7 567 67.0
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 8.2e-196 687.6 572 67.3
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 1.8e-195 686.4 571 66.4
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 4.1e-195 685.3 562 66.0
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 9.1e-195 684.1 562 65.8
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 1.2e-194 683.7 565 65.8
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 4.5e-194 681.8 565 65.8
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 4.5e-194 681.8 565 65.8
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 1.4e-192 676.8 565 65.5
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 2.1e-191 672.9 589 62.1
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 1.4e-190 670.2 567 64.9
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 1.1e-189 667.2 561 66.1
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 1.3e-188 663.7 575 64.2
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 6.3e-188 661.4 571 65.0
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 1.6e-186 656.8 570 63.0
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 2.2e-185 652.9 570 65.6
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 8.8e-182 641.0 565 63.7
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 8.8e-182 641.0 565 63.7
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 2.6e-181 639.4 565 63.5
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 4.4e-181 638.6 565 63.5
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 4.4e-181 638.6 565 63.5
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 2.2e-180 636.3 565 63.7
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 1.6e-178 630.2 571 62.9
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 1.2e-175 620.5 521 67.6
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 2.7e-170 602.8 569 58.5
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 1.3e-169 600.5 526 62.5
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 2.3e-169 599.7 567 58.4
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 2.9e-169 599.4 579 57.0
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 8.6e-169 597.8 576 59.0
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 4.4e-165 585.5 482 66.8
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 2.0e-162 576.6 508 63.8
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 2.1e-159 566.6 645 51.5
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 1.4e-155 553.9 525 61.0
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 6.4e-140 501.9 412 66.3
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 2.4e-118 430.3 460 55.4
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 4.0e-118 429.5 409 61.9
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 4.3e-112 409.5 585 40.3
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 3.7e-111 406.4 563 43.5
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 6.5e-100 369.0 224 81.2
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 3.9e-97 359.8 582 37.1
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 3.9e-97 359.8 237 78.9
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 4.1e-94 349.7 587 37.8
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 7.7e-93 345.5 567 39.3
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 2.3e-89 334.0 254 75.2
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 3.0e-89 333.6 301 65.8
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 1.4e-86 324.7 299 62.2
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 6.7e-73 279.3 266 57.1
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 3.1e-70 270.4 174 74.7
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 1.8e-65 254.6 371 48.8
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 6.3e-55 219.5 169 70.4
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 5.9e-53 213.0 582 33.2
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 1.3e-47 195.3 584 26.7
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 2.6e-40 171.0 155 67.7
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 1.1e-27 129.0 132 57.6
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.6e-26 124.0 71 80.3
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 6.4e-15 86.7 54 87.0
THA.LOC104799305 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 3.1e-09 67.8 62 58.1
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 3.4e-08 64.3 51 60.8
RcHm_v2.0_Chr3g0480231 Rosa chinensis HOM05D006621 ORTHO05D043305 4.2e-06 57.4 41 78.0


User provided reference genes

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