Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 3.7e-163 578.2 300 100.0
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 2.6e-100 369.4 309 68.0
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.3e-99 367.1 303 66.7
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.2e-97 360.5 303 65.7
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 3.6e-97 359.0 303 67.0
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 8.8e-96 354.4 302 65.9
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 1.5e-95 353.6 310 64.8
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 3.3e-95 352.4 307 65.8
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 6.3e-94 348.2 303 65.7
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 9.1e-93 344.4 300 65.7
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 1.5e-92 343.6 301 64.8
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 2.6e-92 342.8 305 64.3
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.1e-90 337.4 309 64.1
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 1.4e-90 337.0 308 61.7
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 2.5e-90 336.3 302 63.2
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 1.2e-89 334.0 312 62.8
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 2.1e-89 333.2 308 61.0
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 1.0e-88 330.9 301 63.5
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 1.4e-88 330.5 254 68.5
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 1.8e-88 330.1 214 79.9
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 3.0e-88 329.3 214 80.4
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 3.0e-88 329.3 302 62.6
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 6.7e-88 328.2 274 65.7
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 9.7e-87 324.3 233 72.1
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 1.3e-86 323.9 304 61.8
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 6.3e-86 321.6 223 76.7
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 2.4e-85 319.7 216 76.9
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 7.0e-85 318.2 215 77.2
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 1.2e-84 317.4 255 65.1
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 5.9e-84 315.1 349 55.9
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 5.0e-83 312.0 303 60.1
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.1e-82 310.8 216 73.6
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 9.4e-82 307.8 207 76.3
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 2.7e-81 306.2 248 67.3
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 4.7e-81 305.4 226 70.8
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 1.4e-80 303.9 306 56.9
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 1.8e-80 303.5 252 64.3
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 3.0e-80 302.8 248 64.9
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 4.0e-80 302.4 231 68.4
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 1.1e-79 300.8 302 57.3
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 1.5e-79 300.4 215 70.7
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 1.5e-79 300.4 206 75.2
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 3.3e-79 299.3 250 66.4
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 4.4e-79 298.9 276 64.1
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 9.7e-79 297.7 222 72.5
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.3e-78 297.4 252 65.9
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.7e-78 297.0 276 60.9
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.7e-78 297.0 309 57.0
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 2.2e-78 296.6 224 68.8
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 3.7e-78 295.8 307 59.3
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.4e-77 293.9 301 54.2
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 1.4e-77 293.9 213 70.4
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 4.1e-77 292.4 288 58.7
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 7.0e-77 291.6 250 65.6
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 9.1e-77 291.2 302 54.3
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 1.2e-76 290.8 193 77.2
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 5.9e-76 288.5 236 64.8
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 1.3e-75 287.3 299 53.8
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.3e-75 287.3 302 54.3
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 2.2e-75 286.6 301 56.5
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 1.5e-74 283.9 236 63.6
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 3.2e-74 282.7 248 62.1
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 3.2e-74 282.7 248 64.9
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 4.2e-74 282.3 230 63.5
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 5.5e-74 282.0 259 58.7
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.6e-73 280.4 302 52.6
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 1.6e-73 280.4 257 58.4
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 2.1e-73 280.0 285 52.3
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 3.6e-73 279.3 213 66.7
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 1.4e-72 277.3 240 60.8
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 5.7e-71 271.9 268 58.6
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 7.5e-71 271.6 268 58.6
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 9.8e-71 271.2 207 67.1
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 4.1e-69 265.8 309 54.0
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 1.2e-68 264.2 229 60.3
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 1.5e-66 257.3 175 73.7
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 2.5e-66 256.5 234 63.7
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 3.2e-66 256.1 234 60.7
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 1.6e-65 253.8 224 59.4
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 2.7e-65 253.1 369 46.3
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 4.7e-65 252.3 189 68.8
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 6.1e-65 251.9 227 63.0
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 1.0e-64 251.1 340 47.6
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 3.4e-63 246.1 206 60.7
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 3.4e-63 246.1 268 55.6
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 4.4e-63 245.7 211 59.2
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 7.5e-63 245.0 215 62.3
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 7.5e-63 245.0 268 55.2
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 3.1e-61 239.6 213 62.9
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 3.1e-61 239.6 213 62.9
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 1.7e-59 233.8 303 48.5
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 3.8e-59 232.6 176 71.0
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 8.6e-59 231.5 281 50.2
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 2.5e-58 229.9 202 56.9
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 3.6e-57 226.1 319 47.0
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 4.7e-57 225.7 225 56.0
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 4.6e-52 209.1 146 72.6
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 1.5e-50 204.1 147 70.7
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 3.3e-50 203.0 215 55.3
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 4.3e-50 202.6 134 75.4
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 7.3e-50 201.8 212 55.7
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 2.0e-47 193.7 198 60.1
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 7.8e-44 181.8 136 68.4
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 1.5e-42 177.6 235 49.4
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 4.3e-42 176.0 214 44.4
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 9.8e-39 164.9 133 65.4
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 1.7e-38 164.1 263 43.7
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 1.7e-38 164.1 202 48.5
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 3.7e-38 162.9 143 56.6
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 6.6e-35 152.1 190 44.2
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 7.3e-34 148.7 151 57.6
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 7.3e-34 148.7 304 39.1
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.1e-32 144.8 116 63.8
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 2.4e-24 117.1 163 47.9
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 1.3e-22 111.3 187 38.0
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 8.4e-22 108.6 178 35.4
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 1.0e-19 101.7 192 34.4
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 8.1e-17 92.0 80 60.0
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 4.2e-13 79.7 90 50.0
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 7.9e-12 75.5 89 52.8
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 2.1e-09 67.4 53 62.3
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 1.2e-07 61.6 39 79.5


User provided reference genes

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