Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 3.1e-145 518.5 263 100.0
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 3.7e-98 362.1 267 71.9
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 5.0e-95 351.7 264 66.7
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 2.1e-93 346.3 268 64.2
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 3.6e-93 345.5 264 66.7
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 3.6e-93 345.5 264 66.7
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 1.7e-90 336.7 271 62.7
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 6.3e-90 334.7 253 65.6
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 6.3e-90 334.7 272 64.0
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 4.1e-89 332.0 268 64.9
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 2.0e-88 329.7 267 64.8
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 5.9e-88 328.2 271 62.4
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 2.9e-87 325.9 265 64.2
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 3.8e-87 325.5 272 62.9
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 2.5e-86 322.8 273 62.3
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 3.2e-86 322.4 250 66.0
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 4.2e-86 322.0 274 61.3
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 5.5e-86 321.6 272 62.9
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 9.4e-86 320.9 271 62.0
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 4.7e-85 318.5 267 61.8
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 6.1e-85 318.2 271 60.5
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 6.1e-85 318.2 268 62.7
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 8.0e-85 317.8 271 62.0
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 8.0e-85 317.8 271 62.7
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 5.2e-84 315.1 233 67.0
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 6.7e-84 314.7 271 60.1
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 1.2e-83 313.9 271 62.7
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 5.7e-83 311.6 271 60.9
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 7.5e-83 311.2 272 59.2
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 1.7e-82 310.1 271 60.1
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 1.7e-82 310.1 271 60.1
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 3.7e-82 308.9 269 59.1
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 1.8e-81 306.6 242 64.5
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 3.1e-81 305.8 271 59.8
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 5.3e-81 305.1 233 65.2
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 1.6e-80 303.5 269 58.4
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 2.7e-80 302.8 267 59.2
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 3.5e-80 302.4 271 59.0
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 3.5e-80 302.4 271 59.0
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 3.5e-80 302.4 232 66.4
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 3.5e-80 302.4 269 58.4
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 4.5e-80 302.0 266 59.8
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 4.5e-80 302.0 271 60.5
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 5.9e-80 301.6 255 60.0
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 7.7e-80 301.2 269 58.0
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 7.7e-80 301.2 268 60.1
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 1.3e-79 300.4 269 57.6
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 1.7e-79 300.1 272 62.1
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 5.0e-79 298.5 238 64.3
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 6.5e-79 298.1 273 57.5
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 6.5e-79 298.1 273 57.5
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 8.5e-79 297.7 272 58.8
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 8.5e-79 297.7 268 59.0
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 1.9e-78 296.6 267 56.6
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 7.2e-78 294.7 268 58.6
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 1.2e-77 293.9 269 57.6
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 1.2e-77 293.9 269 56.1
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 2.7e-77 292.7 269 58.0
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 8.0e-77 291.2 241 60.6
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 1.4e-76 290.4 270 58.1
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 8.8e-76 287.7 246 60.6
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 8.8e-76 287.7 268 59.3
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 2.0e-75 286.6 267 57.3
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 2.6e-75 286.2 267 58.8
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 3.4e-75 285.8 263 57.4
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 3.4e-75 285.8 276 56.5
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 3.4e-75 285.8 271 57.9
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 4.4e-75 285.4 266 54.9
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 7.5e-75 284.6 270 57.8
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 7.5e-75 284.6 270 57.8
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 3.7e-74 282.3 269 56.5
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 4.8e-74 282.0 276 56.5
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 6.3e-74 281.6 269 56.5
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 2.0e-72 276.6 269 53.5
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 2.0e-72 276.6 266 56.8
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 4.5e-72 275.4 237 60.8
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 2.5e-70 269.6 267 57.3
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 1.4e-68 263.8 241 60.2
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 1.8e-68 263.5 267 56.9
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 6.8e-68 261.5 272 52.6
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 2.6e-67 259.6 272 52.6
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 7.5e-67 258.1 214 59.3
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 2.9e-63 246.1 197 64.5
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 1.9e-62 243.4 213 61.0
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 3.3e-62 242.7 269 52.8
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 2.0e-56 223.4 232 55.6
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 2.5e-54 216.5 263 46.0
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 2.5e-54 216.5 263 46.0
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 5.6e-54 215.3 264 46.2
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 6.8e-52 208.4 240 49.2
SHI15728 Sapria himalayana HOM05D006853 ORTHO05D008906 1.2e-51 207.6 267 46.4
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 2.0e-51 206.8 268 44.4
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 2.0e-51 206.8 248 48.0
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 4.1e-49 199.1 266 43.2
VMungo1215G2951 Vigna mungo HOM05D006853 ORTHO05D008906 9.2e-49 198.0 262 42.4
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 2.3e-47 193.4 157 62.4
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 3.0e-47 193.0 265 45.7
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 2.5e-46 189.9 242 45.9
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 9.5e-46 188.0 265 45.7
Phvul.002G082000 Phaseolus vulgaris HOM05D006853 ORTHO05D008906 1.6e-45 187.2 262 42.0
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 2.1e-45 186.8 255 43.1
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 6.2e-45 185.3 240 45.4
C09p31840 Brassica napus HOM05D006853 ORTHO05D008906 3.1e-44 183.0 193 50.3
BcaC04g21430 Brassica carinata HOM05D006853 ORTHO05D008906 6.8e-44 181.8 193 49.7
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea HOM05D006853 ORTHO05D008906 1.3e-39 167.5 265 41.5
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea HOM05D006853 ORTHO05D008906 6.6e-39 165.2 233 43.3
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 9.2e-33 144.8 218 41.3
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 3.5e-32 142.9 237 37.6
AL5G13960 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 9.6e-30 134.8 105 63.8
Os01g0219000 Oryza sativa ssp. japonica HOM05D006853 ORTHO05D008906 1.5e-27 127.5 217 41.5
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis HOM05D006853 ORTHO05D008906 3.5e-24 116.3 239 35.6
CDE03G0412 Ceratophyllum demersum HOM05D001926 ORTHO05D002121 3.5e-24 116.3 148 42.6
Zm00001eb119820 Zea mays HOM05D006853 ORTHO05D008906 5.1e-23 112.5 215 36.7
Mapoly0008s0082 Marchantia polymorpha HOM05D006853 ORTHO05D008906 8.7e-23 111.7 249 34.5
Psat2g098640 Pisum sativum HOM05D006853 ORTHO05D008906 8.1e-21 105.1 114 46.5
ATR0737G064 Amborella trichopoda HOM05D006853 ORTHO05D008906 1.3e-18 97.8 101 48.5
Psat1g127240 Pisum sativum HOM05D002500 ORTHO05D002587 1.6e-16 90.9 83 51.8
HanXRQChr12g0364531 Helianthus annuus HOM05D006853 ORTHO05D008906 3.5e-16 89.7 106 50.9
Cre01.g037650 Chlamydomonas reinhardtii HOM05D006853 ORTHO05D008906 5.3e-12 75.9 175 33.1
PSO478G3347 Papaver somniferum HOM05D006853 ORTHO05D008906 1.1e-09 68.2 53 60.4
GSVIVG01017445001 Vitis vinifera HOM05D000518 ORTHO05D001974 7.1e-09 65.5 61 54.1
BraA09t38070Z Brassica rapa HOM05D006853 ORTHO05D008906 4.3e-06 56.2 41 63.4


User provided reference genes

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