Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2382 Cannabis sativa HOM05D005756 ORTHO05D007991 3.4e-184 648.3 323 100.0
CANSAT64G2821 Cannabis sativa HOM05D005756 ORTHO05D007991 3.8e-159 565.1 297 89.6
RcHm_v2.0_Chr2g0156171 Rosa chinensis HOM05D005756 ORTHO05D007991 5.9e-112 408.3 294 67.3
MD09G1126000 Malus domestica HOM05D005756 ORTHO05D007991 1.6e-109 400.2 294 67.3
FvH4_6g40720 Fragaria vesca HOM05D005756 ORTHO05D007991 3.6e-109 399.1 294 63.6
FAN05G2330 Fragaria x ananassa HOM05D005756 ORTHO05D007991 1.8e-108 396.7 294 63.9
FAN14G2144 Fragaria x ananassa HOM05D005756 ORTHO05D007991 3.0e-108 396.0 294 63.3
FAN09G1647 Fragaria x ananassa HOM05D005756 ORTHO05D007991 1.5e-107 393.7 294 63.6
Thecc.01G193500 Theobroma cacao HOM05D005756 ORTHO05D007991 3.1e-105 386.0 294 63.9
CsaV3_6G009540 Cucumis sativus L. HOM05D005756 ORTHO05D007991 4.5e-104 382.1 299 61.9
MELO3C025971.2 Cucumis melo HOM05D005756 ORTHO05D007991 2.9e-103 379.4 294 61.6
ClCG02G009290 Citrullus lanatus HOM05D005756 ORTHO05D007991 1.1e-102 377.5 294 61.2
Prupe.3G198700 Prunus persica HOM05D005756 ORTHO05D007991 1.1e-102 377.5 306 63.1
COL.COLO4_33341 Corchorus olitorius HOM05D005756 ORTHO05D007991 2.1e-101 373.2 294 61.2
Gorai.001G191800 Gossypium raimondii HOM05D005756 ORTHO05D007991 3.6e-101 372.5 295 61.0
Gohir.A07G164300 Gossypium hirsutum HOM05D005756 ORTHO05D007991 4.7e-101 372.1 295 61.4
Gohir.D07G171500 Gossypium hirsutum HOM05D005756 ORTHO05D007991 4.7e-101 372.1 293 61.8
Duzib211G0508 Durio zibethinus HOM05D005756 ORTHO05D007991 1.4e-100 370.5 296 61.1
Ciclev10018016m.g Citrus clementina HOM05D005756 ORTHO05D007991 1.8e-100 370.2 298 62.4
Gohir.A07G191400 Gossypium hirsutum HOM05D005756 ORTHO05D007991 7.5e-99 364.8 294 61.2
Haze_12636 Corylus avellana HOM05D005756 ORTHO05D007991 1.7e-98 363.6 299 58.9
Sed0020254 Sechium edule HOM05D005756 ORTHO05D007991 2.8e-98 362.8 281 62.6
Duzib133G1068 Durio zibethinus HOM05D005756 ORTHO05D007991 8.2e-98 361.3 294 60.5
Sed0018608 Sechium edule HOM05D005756 ORTHO05D007991 8.2e-98 361.3 294 59.9
Gorai.001G221400 Gossypium raimondii HOM05D005756 ORTHO05D007991 5.3e-97 358.6 294 60.2
Manes.12G064800 Manihot esculenta HOM05D005756 ORTHO05D007991 1.2e-96 357.5 292 60.6
Actinidia35206 Actinidia chinensis HOM05D005756 ORTHO05D007991 1.7e-95 353.6 296 58.4
Sabra14G0126700 Salix brachista HOM05D005756 ORTHO05D007991 2.9e-95 352.8 298 58.7
Potri.014G166400 Populus trichocarpa HOM05D005756 ORTHO05D007991 1.5e-94 350.5 298 58.7
Manes.13G062400 Manihot esculenta HOM05D005756 ORTHO05D007991 4.2e-94 349.0 292 59.6
QL08p028191 Quercus lobata HOM05D005756 ORTHO05D007991 4.2e-94 349.0 290 59.7
CiPaw.03G281000 Carya illinoinensis HOM05D005756 ORTHO05D007991 1.2e-93 347.4 296 58.1
Carub.0007s3155 Capsella rubella HOM05D005756 ORTHO05D007991 1.0e-92 344.4 290 55.9
AT5G35770 Arabidopsis thaliana HOM05D005756 ORTHO05D007991 1.4e-92 344.0 293 55.6
Atru.chr6.3377 Acer truncatum HOM05D005756 ORTHO05D007991 4.0e-92 342.4 318 57.2
AL7G44670 Arabidopsis lyrata HOM05D005756 ORTHO05D007991 4.0e-92 342.4 293 54.9
MD17G1116000 Malus domestica HOM05D005756 ORTHO05D007991 4.0e-92 342.4 240 67.5
PGR042G1143 Punica granatum HOM05D005756 ORTHO05D007991 4.0e-92 342.4 283 59.0
Sp7g06350 Schrenkiella parvula HOM05D005756 ORTHO05D007991 3.4e-91 339.3 294 55.4
GSVIVG01030075001 Vitis vinifera HOM05D005756 ORTHO05D007991 1.3e-90 337.4 297 57.9
Oeu021293.1 Olea europaea HOM05D005756 ORTHO05D007991 2.2e-90 336.7 291 56.0
Peaxi162Scf00218g00178 Petunia axillaris HOM05D005756 ORTHO05D007991 2.2e-90 336.7 294 55.8
Actinidia18810 Actinidia chinensis HOM05D005756 ORTHO05D007991 2.8e-90 336.3 291 57.7
THA.LOC104815437 Tarenaya hassleriana HOM05D005756 ORTHO05D007991 2.8e-90 336.3 294 56.5
BcaC02g09499 Brassica carinata HOM05D005756 ORTHO05D007991 4.8e-90 335.5 294 55.4
BolC4t25929H Brassica oleracea HOM05D005756 ORTHO05D007991 4.8e-90 335.5 294 55.4
C04p43490 Brassica napus HOM05D005756 ORTHO05D007991 1.1e-89 334.3 294 55.4
Nn1g03213 Nelumbo nucifera HOM05D005756 ORTHO05D007991 1.1e-89 334.3 295 56.6
Aa31sc373G50 Aethionema arabicum HOM05D005756 ORTHO05D007991 2.4e-89 333.2 290 54.1
BcaB06g26996 Brassica carinata HOM05D005756 ORTHO05D007991 2.4e-89 333.2 294 55.4
A04p10010 Brassica napus HOM05D005756 ORTHO05D007991 2.4e-89 333.2 294 55.4
BraA04t16663Z Brassica rapa HOM05D005756 ORTHO05D007991 2.4e-89 333.2 294 55.4
CSS0006225 Camellia sinensis var. sinensis HOM05D005756 ORTHO05D007991 2.4e-89 333.2 297 55.6
Peaxi162Scf00802g00236 Petunia axillaris HOM05D005756 ORTHO05D007991 3.1e-89 332.8 303 53.8
Lsat_1_v5_gn_7_97180 Lactuca sativa HOM05D005756 ORTHO05D007991 4.1e-89 332.4 292 55.8
TAR629G3088 Trochodendron aralioides HOM05D005756 ORTHO05D007991 2.0e-88 330.1 297 53.9
CAN.G60.7 Capsicum annuum HOM05D005756 ORTHO05D007991 3.8e-87 325.9 292 55.5
SalBow1G0676 Salvia bowleyana HOM05D005756 ORTHO05D007991 3.8e-87 325.9 287 54.7
HanXRQChr11g0328881 Helianthus annuus HOM05D005756 ORTHO05D007991 7.2e-86 321.6 289 55.7
Nitab4.5_0000006g0690 Nicotiana tabacum HOM05D005756 ORTHO05D007991 7.2e-86 321.6 282 54.6
Solyc05g041220.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 7.2e-86 321.6 305 53.4
Nitab4.5_0010487g0010 Nicotiana tabacum HOM05D005756 ORTHO05D007991 1.6e-85 320.5 282 54.3
Lalb_Chr10g0107581 Lupinus albus HOM05D005756 ORTHO05D007991 4.7e-85 318.9 288 55.2
Psat2g005040 Pisum sativum HOM05D005756 ORTHO05D007991 1.0e-84 317.8 299 52.2
SalBow1G7885 Salvia bowleyana HOM05D005756 ORTHO05D007991 1.4e-84 317.4 276 56.2
TPR.G1270 Trifolium pratense HOM05D005756 ORTHO05D007991 1.4e-84 317.4 296 54.4
ECA236G0821 Erigeron canadensis HOM05D005756 ORTHO05D007991 2.3e-84 316.6 277 56.0
Sc21g0000630 Simmondsia chinensis HOM05D005756 ORTHO05D007991 2.3e-84 316.6 276 56.9
Medtr5g097060 Medicago truncatula HOM05D005756 ORTHO05D007991 5.2e-84 315.5 294 54.1
PSO675G1451 Papaver somniferum HOM05D005756 ORTHO05D007991 8.8e-84 314.7 289 55.0
Aqoxy4G02252 Aquilegia oxysepala HOM05D005756 ORTHO05D007991 1.5e-83 313.9 292 55.1
Oeu052200.1 Olea europaea HOM05D005756 ORTHO05D007991 7.5e-83 311.6 333 47.7
PSO541G4672 Papaver somniferum HOM05D005756 ORTHO05D007991 7.5e-83 311.6 297 53.9
Rhsim04G0027400 Rhododendron simsii HOM05D005756 ORTHO05D007991 1.7e-82 310.5 329 49.5
Gohir.D07G197700 Gossypium hirsutum HOM05D005756 ORTHO05D007991 2.8e-82 309.7 239 60.7
Glyma.02G304600 Glycine max HOM05D005756 ORTHO05D007991 6.3e-82 308.5 297 53.2
Hma1.2p1_0545F.1_g176030 Hydrangea macrophylla HOM05D005756 ORTHO05D007991 2.4e-81 306.6 246 59.8
LjContig00081g0010185 Lotus japonicus HOM05D005756 ORTHO05D007991 1.7e-79 300.4 311 50.5
arahy.Tifrunner.gnm1.ann1.5EZV1I Arachis hypogaea HOM05D005756 ORTHO05D007991 2.9e-79 299.7 302 51.0
arahy.Tifrunner.gnm1.ann1.P22I4F Arachis hypogaea HOM05D005756 ORTHO05D007991 2.9e-79 299.7 302 51.0
Nitab4.5_0005267g0030 Nicotiana tabacum HOM05D005756 ORTHO05D007991 2.9e-79 299.7 243 56.8
Eucgr.A01028 Eucalyptus grandis HOM05D005756 ORTHO05D007991 3.8e-79 299.3 241 58.9
Oeu027646.1 Olea europaea HOM05D005756 ORTHO05D007991 8.6e-79 298.1 245 57.6
Migut.K00325 Erythranthe guttata HOM05D005756 ORTHO05D007991 7.3e-78 295.0 297 51.9
HanXRQChr04g0126551 Helianthus annuus HOM05D005756 ORTHO05D007991 1.2e-77 294.3 239 58.6
CDE06G1141 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 3.6e-77 292.7 274 50.7
Migut.J01345 Erythranthe guttata HOM05D005756 ORTHO05D007991 1.0e-76 291.2 281 52.3
unitig_0.g2684 Utricularia gibba HOM05D005756 ORTHO05D007991 3.0e-76 289.7 267 50.6
Thhalv10005699m.g Eutrema salsugineum HOM05D005756 ORTHO05D007991 2.0e-75 287.0 252 54.4
SHI10154 Sapria himalayana HOM05D005756 ORTHO05D007991 2.0e-75 287.0 364 43.1
Cc00_g15460 Coffea canephora HOM05D005756 ORTHO05D007991 5.7e-75 285.4 242 55.4
DCAR_019686 Daucus carota HOM05D005756 ORTHO05D001984 2.2e-74 283.5 239 53.6
Solyc07g045550.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 3.7e-74 282.7 242 55.0
AUR62015018 Chenopodium quinoa HOM05D005756 ORTHO05D007991 2.4e-73 280.0 308 48.4
vmacro09483 Vaccinium macrocarpon HOM05D005756 ORTHO05D007991 2.4e-73 280.0 245 54.7
Phvul.008G284100 Phaseolus vulgaris HOM05D005756 ORTHO05D007991 3.2e-73 279.6 292 49.7
Ah.01g013810 Amaranthus hybridus HOM05D005756 ORTHO05D007991 1.0e-71 274.6 285 49.1
Dinv26618 Davidia involucrata HOM05D005756 ORTHO05D007991 6.6e-71 271.9 292 50.3
VMungo0647G0888 Vigna mungo HOM05D005756 ORTHO05D007991 6.6e-71 271.9 306 46.7
Lj1C795T0 Lonicera japonica HOM05D005756 ORTHO05D007991 2.5e-70 270.0 226 55.8
ATR0624G001 Amborella trichopoda HOM05D005756 ORTHO05D007991 7.3e-70 268.5 280 50.0
Ca_06445_v3 Cicer arietinum L. HOM05D005756 ORTHO05D007991 6.8e-68 261.9 250 50.8
PGSC0003DMG400018834 Solanum tuberosum HOM05D005756 ORTHO05D007991 2.0e-67 260.4 239 52.7
CARHR216780 Cardamine hirsuta HOM05D005756 ORTHO05D007991 9.8e-67 258.1 209 57.4
SGA_v2.0_scaffold265G46105 Striga asiatica HOM05D005756 ORTHO05D007991 3.2e-65 253.1 302 47.0
Oeu032118.1 Olea europaea HOM05D005756 ORTHO05D007991 5.4e-65 252.3 298 46.6
EL10Ac9g22689 Beta vulgaris HOM05D005756 ORTHO05D007991 1.2e-64 251.1 256 50.0
Gohir.D11G156320 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.0e-63 248.1 319 45.5
TWI18G0016 Tripterygium wilfordii HOM05D005756 ORTHO05D007991 1.7e-63 247.3 278 43.9
SEGI_14875 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 6.6e-63 245.4 268 47.0
Sopen05g025200 Solanum pennellii HOM05D005756 ORTHO05D000001 4.7e-61 239.2 307 44.6
SEGI_03134 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 6.2e-61 238.8 268 44.0
SEGI_35519 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 1.1e-60 238.0 278 45.0
Cpa.g.sc211.22 Carica papaya HOM05D005756 ORTHO05D007991 1.7e-58 230.7 186 58.6
HPP92_028362 Vanilla planifolia HOM05D005756 ORTHO05D007991 5.4e-57 225.7 298 43.3
unitig_748.g7200 Utricularia gibba HOM05D005756 ORTHO05D007991 6.0e-56 222.2 227 50.2
HPP92_014030 Vanilla planifolia HOM05D005756 ORTHO05D007991 7.8e-56 221.9 298 43.0
Glyma.14G009200 Glycine max HOM05D005756 ORTHO05D007991 5.6e-54 215.7 207 51.7
SGA_v2.0_scaffold12G05997 Striga asiatica HOM05D005756 ORTHO05D007991 4.4e-51 206.1 246 44.3
SEGI_34368 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 1.5e-46 191.0 216 45.4
SMO364G0494 Selaginella moellendorffii HOM05D005756 ORTHO05D007991 4.2e-41 172.9 281 34.2
Dinv21286 Davidia involucrata HOM05D005756 ORTHO05D007991 7.8e-40 168.7 251 38.2
CDE04G3001 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 6.9e-36 155.6 294 34.0
AUR62029095 Chenopodium quinoa HOM05D005756 ORTHO05D007991 1.2e-27 128.3 128 50.8
SGA_v2.0_scaffold12G05995 Striga asiatica HOM05D002374 ORTHO05D406151 2.1e-24 117.5 147 44.9
SEGI_18115 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 6.9e-12 75.9 75 50.7
Cpa.g.sc211.21 Carica papaya HOM05D005756 ORTHO05D018916 8.5e-10 68.9 56 67.9
Dinv21288 Davidia involucrata HOM05D005756 ORTHO05D018916 1.1e-06 58.5 58 53.4
Hma1.2p1_0545F.1_g176010 Hydrangea macrophylla HOM05D005756 ORTHO05D018916 4.3e-06 56.6 54 63.0
DCAR_019685 Daucus carota HOM05D005756 ORTHO05D018916 7.4e-06 55.8 54 55.6


User provided reference genes

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