Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2357 Cannabis sativa HOM05D006899 ORTHO05D008566 2.1e-101 372.5 199 100.0
QL08p044873 Quercus lobata HOM05D006899 ORTHO05D008566 2.0e-51 206.5 201 64.7
Cfa023072 Carpinus fangiana HOM05D006899 ORTHO05D008566 4.8e-50 201.8 188 66.0
Peaxi162Scf00111g00221 Petunia axillaris HOM05D006899 ORTHO05D008566 8.2e-50 201.1 173 66.5
Rhsim04G0081600 Rhododendron simsii HOM05D006899 ORTHO05D008566 1.8e-49 199.9 180 64.4
Potri.005G204200 Populus trichocarpa HOM05D006899 ORTHO05D008566 2.4e-49 199.5 187 66.3
Eucgr.A02015 Eucalyptus grandis HOM05D006899 ORTHO05D008566 9.1e-49 197.6 211 61.6
VMungo0647G1903 Vigna mungo HOM05D006899 ORTHO05D008566 1.6e-48 196.8 175 65.7
Sed0025977 Sechium edule HOM05D006899 ORTHO05D008566 2.6e-48 196.1 181 66.3
Phvul.008G193700 Phaseolus vulgaris HOM05D006899 ORTHO05D008566 4.5e-48 195.3 175 65.7
Potri.002G058000 Populus trichocarpa HOM05D006899 ORTHO05D008566 7.7e-48 194.5 203 61.1
Gohir.D07G086300 Gossypium hirsutum HOM05D006899 ORTHO05D008566 1.0e-47 194.1 194 60.3
Gorai.001G092300 Gossypium raimondii HOM05D006899 ORTHO05D008566 1.0e-47 194.1 193 60.6
vmacro09192 Vaccinium macrocarpon HOM05D006899 ORTHO05D008566 1.3e-47 193.7 183 62.3
GSVIVG01020847001 Vitis vinifera HOM05D006899 ORTHO05D008566 1.7e-47 193.4 166 70.5
Nitab4.5_0001883g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.9e-47 192.6 163 68.1
CsaV3_4G031920 Cucumis sativus L. HOM05D006899 ORTHO05D008566 6.5e-47 191.4 168 66.1
Glyma.02G285100 Glycine max HOM05D006899 ORTHO05D008566 8.5e-47 191.0 190 60.5
MD09G1149700 Malus domestica HOM05D006899 ORTHO05D008566 8.5e-47 191.0 204 58.8
MELO3C026968.2 Cucumis melo HOM05D006899 ORTHO05D008566 1.1e-46 190.7 164 67.7
PGR042G1005 Punica granatum HOM05D006899 ORTHO05D008566 1.1e-46 190.7 181 64.6
PGSC0003DMG400017304 Solanum tuberosum HOM05D006899 ORTHO05D008566 1.1e-46 190.7 150 72.0
CiPaw.04G138700 Carya illinoinensis HOM05D006899 ORTHO05D008566 1.9e-46 189.9 202 58.9
Gohir.A07G080700 Gossypium hirsutum HOM05D006899 ORTHO05D008566 1.9e-46 189.9 172 64.5
Haze_13530 Corylus avellana HOM05D006899 ORTHO05D008566 3.2e-46 189.1 229 54.1
Nitab4.5_0002251g0050 Nicotiana tabacum HOM05D006899 ORTHO05D008566 3.2e-46 189.1 189 64.6
MD17G1136600 Malus domestica HOM05D006899 ORTHO05D008566 4.2e-46 188.7 173 64.2
Prupe.3G176400 Prunus persica HOM05D006899 ORTHO05D008566 4.2e-46 188.7 202 60.4
Glyma.14G029700 Glycine max HOM05D006899 ORTHO05D008566 5.5e-46 188.3 191 62.8
Solyc07g056240.3 Solanum lycopersicum HOM05D006899 ORTHO05D008566 7.2e-46 188.0 150 70.7
Nn4g26539 Nelumbo nucifera HOM05D006899 ORTHO05D008566 9.4e-46 187.6 201 61.7
Atru.chr6.2058 Acer truncatum HOM05D006899 ORTHO05D008566 2.1e-45 186.4 118 83.9
LjContig00049g0021241 Lotus japonicus HOM05D006899 ORTHO05D008566 2.1e-45 186.4 177 63.3
Thecc.01G170200 Theobroma cacao HOM05D006899 ORTHO05D008566 2.7e-45 186.0 188 63.8
Sabra02G0047300 Salix brachista HOM05D006899 ORTHO05D008566 3.6e-45 185.7 203 59.6
Sopen07g029600 Solanum pennellii HOM05D006899 ORTHO05D008566 3.6e-45 185.7 150 70.0
Cpa.g.sc50.104 Carica papaya HOM05D006899 ORTHO05D008566 4.7e-45 185.3 139 73.4
Oeu020934.1 Olea europaea HOM05D006899 ORTHO05D008566 8.0e-45 184.5 162 66.0
TWI59G0652 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 1.4e-44 183.7 182 62.1
Oeu013822.1 Olea europaea HOM05D006899 ORTHO05D008566 1.8e-44 183.3 162 66.0
TAR627G0648 Trochodendron aralioides HOM05D006899 ORTHO05D008566 2.3e-44 183.0 175 60.0
ClCG11G016470 Citrullus lanatus HOM05D006899 ORTHO05D008566 3.0e-44 182.6 118 82.2
TPR.G12679 Trifolium pratense HOM05D006899 ORTHO05D008566 3.0e-44 182.6 201 58.7
Duzib138G0065 Durio zibethinus HOM05D006899 ORTHO05D008566 5.2e-44 181.8 179 63.1
COL.COLO4_08896 Corchorus olitorius HOM05D006899 ORTHO05D008566 1.2e-43 180.6 187 61.0
Medtr5g091190 Medicago truncatula HOM05D006899 ORTHO05D008566 2.6e-43 179.5 177 61.0
Actinidia03641 Actinidia chinensis HOM05D006899 ORTHO05D008566 3.3e-43 179.1 125 79.2
MSTRG.12841 Avicennia marina HOM05D006899 ORTHO05D008566 4.4e-43 178.7 147 69.4
arahy.Tifrunner.gnm1.ann1.226PX6 Arachis hypogaea HOM05D006899 ORTHO05D008566 5.7e-43 178.3 188 59.6
arahy.Tifrunner.gnm1.ann1.SNQ1P9 Arachis hypogaea HOM05D006899 ORTHO05D008566 5.7e-43 178.3 188 60.1
FAN09G4704 Fragaria x ananassa HOM05D006899 ORTHO05D008566 5.7e-43 178.3 188 56.9
SalBow7G1887 Salvia bowleyana HOM05D006899 ORTHO05D008566 2.2e-42 176.4 201 56.2
Ciclev10032884m.g Citrus clementina HOM05D006899 ORTHO05D008566 3.7e-42 175.6 180 62.2
RcHm_v2.0_Chr2g0151981 Rosa chinensis HOM05D006899 ORTHO05D008566 3.7e-42 175.6 189 58.2
FAN05G4631 Fragaria x ananassa HOM05D006899 ORTHO05D008566 6.3e-42 174.9 148 64.9
FvH4_6g38570 Fragaria vesca HOM05D006899 ORTHO05D008566 8.2e-42 174.5 188 55.3
Manes.10G088300 Manihot esculenta HOM05D006899 ORTHO05D008566 2.4e-41 172.9 208 57.7
Aa31LG1G24750 Aethionema arabicum HOM05D006899 ORTHO05D008566 3.1e-41 172.6 177 61.0
Cc05_g09700 Coffea canephora HOM05D006899 ORTHO05D008566 3.1e-41 172.6 137 68.6
THA.LOC104803370 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 3.1e-41 172.6 143 67.1
SGA_v2.0_scaffold4G02123 Striga asiatica HOM05D006899 ORTHO05D008566 5.3e-41 171.8 149 64.4
AT2G42975 Arabidopsis thaliana HOM05D006899 ORTHO05D008566 7.0e-41 171.4 119 79.8
THA.LOC104802283 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 1.6e-40 170.2 148 66.2
BcaC02g07213 Brassica carinata HOM05D006899 ORTHO05D008566 2.7e-40 169.5 144 68.1
C04p70000 Brassica napus HOM05D006899 ORTHO05D008566 2.7e-40 169.5 144 68.1
BolC4t28500H Brassica oleracea HOM05D006899 ORTHO05D008566 2.7e-40 169.5 144 68.1
Sp4g25100 Schrenkiella parvula HOM05D006899 ORTHO05D008566 2.7e-40 169.5 148 66.2
BcaB06g29274 Brassica carinata HOM05D006899 ORTHO05D008566 1.3e-39 167.2 123 75.6
AUR62015134 Chenopodium quinoa HOM05D006899 ORTHO05D008566 1.3e-39 167.2 177 58.2
FAN14G2046 Fragaria x ananassa HOM05D006899 ORTHO05D008566 1.7e-39 166.8 122 70.5
Hund24233 Selenicereus undatus HOM05D006899 ORTHO05D008566 1.7e-39 166.8 150 62.7
AL4G41610 Arabidopsis lyrata HOM05D006899 ORTHO05D008566 2.2e-39 166.4 119 77.3
CARHR138030 Cardamine hirsuta HOM05D006899 ORTHO05D008566 2.9e-39 166.0 128 74.2
FAN02G3475 Fragaria x ananassa HOM05D006899 ORTHO05D008566 5.0e-39 165.2 192 52.6
AUR62017595 Chenopodium quinoa HOM05D006899 ORTHO05D008566 6.5e-39 164.9 177 57.1
Thhalv10017256m.g Eutrema salsugineum HOM05D006899 ORTHO05D008566 6.5e-39 164.9 121 75.2
Carub.0004s2544 Capsella rubella HOM05D006899 ORTHO05D008566 8.5e-39 164.5 121 75.2
Sc13g0007020 Simmondsia chinensis HOM05D006899 ORTHO05D008566 8.5e-39 164.5 158 60.8
Migut.E01772 Erythranthe guttata HOM05D006899 ORTHO05D008566 3.2e-38 162.5 181 56.9
EL10Ac9g22843 Beta vulgaris HOM05D006899 ORTHO05D008566 4.2e-38 162.2 146 66.4
BNapus_Darmor_BZH_scaffold_64p00160 Brassica napus HOM05D006899 ORTHO05D008566 5.5e-38 161.8 120 75.0
BraA04t18701Z Brassica rapa HOM05D006899 ORTHO05D008566 1.2e-37 160.6 153 62.7
Aqoxy1G02918 Aquilegia oxysepala HOM05D006899 ORTHO05D008566 4.7e-37 158.7 149 60.4
Lalb_Chr04g0248871 Lupinus albus HOM05D006899 ORTHO05D008566 4.7e-37 158.7 98 84.7
Dinv09142 Davidia involucrata HOM05D006899 ORTHO05D008566 4.0e-36 155.6 160 61.9
HanXRQChr17g0554721 Helianthus annuus HOM05D006899 ORTHO05D008566 2.0e-35 153.3 140 64.3
MBI10_g21113_MAGBIO Magnolia biondii HOM05D006899 ORTHO05D008566 7.5e-35 151.4 120 68.3
ECA233G0523 Erigeron canadensis HOM05D006899 ORTHO05D008566 9.8e-35 151.0 118 71.2
Ah.01g013620 Amaranthus hybridus HOM05D006899 ORTHO05D008566 1.7e-34 150.2 101 79.2
Lj1P601T16 Lonicera japonica HOM05D006899 ORTHO05D008566 2.8e-34 149.4 87 85.1
Duzib133G1045 Durio zibethinus HOM05D006899 ORTHO05D008566 1.1e-33 147.5 185 53.0
CSS0032532 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 1.8e-33 146.7 154 58.4
Lsat_1_v5_gn_8_137860 Lactuca sativa HOM05D006899 ORTHO05D008566 2.9e-31 139.4 144 56.2
PSO675G8667 Papaver somniferum HOM05D006899 ORTHO05D008566 6.5e-31 138.3 182 51.6
PSO478G1301 Papaver somniferum HOM05D006899 ORTHO05D008566 3.2e-30 136.0 182 51.1
HPP92_010055 Vanilla planifolia HOM05D006899 ORTHO05D008566 7.2e-30 134.8 121 60.3
CSS0025344 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 8.0e-29 131.3 141 57.4
PSO541G6147 Papaver somniferum HOM05D006899 ORTHO05D008566 1.5e-27 127.1 133 58.6
unitig_60.g25592 Utricularia gibba HOM05D006899 ORTHO05D008566 4.4e-27 125.6 123 57.7
CDE05G0801 Ceratophyllum demersum HOM05D006899 ORTHO05D008566 5.7e-27 125.2 119 57.1
Os01g0666600 Oryza sativa ssp. japonica HOM05D006899 ORTHO05D008566 1.3e-26 124.0 153 49.0
ATR0585G139 Amborella trichopoda HOM05D006899 ORTHO05D008566 2.0e-24 116.7 114 57.0
Nitab4.5_0004243g0030 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.7e-24 116.3 81 77.8
Hund24244 Selenicereus undatus HOM05D006899 ORTHO05D008566 4.5e-24 115.5 97 64.9
Zm00001eb157430 Zea mays HOM05D006899 ORTHO05D008566 3.8e-23 112.5 145 47.6
Nitab4.5_0004950g0010 Nicotiana tabacum HOM05D006899 ORTHO05D008566 3.3e-22 109.4 81 75.3
Nitab4.5_0009604g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 3.3e-22 109.4 81 75.3
Pp3c13_6560 Physcomitrium patens HOM05D006899 ORTHO05D008566 4.7e-21 105.5 146 43.2
TWI23G0441 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 9.8e-19 97.8 121 52.9
Mapoly0120s0054 Marchantia polymorpha HOM05D006899 ORTHO05D008566 9.2e-17 91.3 145 42.8
Nitab4.5_0002251g0080 Nicotiana tabacum HOM05D006899 ORTHO05D008566 9.2e-17 91.3 91 57.1
Medtr5g016040 Medicago truncatula HOM05D006899 ORTHO05D008566 6.6e-15 85.1 80 58.8
AagrBONN_evm.TU.Sc2ySwM_368.298 Anthoceros agrestis HOM05D006899 ORTHO05D008566 3.3e-14 82.8 152 37.5
SMO353G0201 Selaginella moellendorffii HOM05D006899 ORTHO05D008566 7.5e-11 71.6 77 51.9
Medtr7g035145 Medicago truncatula HOM05D006899 ORTHO05D008566 1.5e-06 57.4 69 36.2


User provided reference genes

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