Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2331 Cannabis sativa HOM05D006434 ORTHO05D008069 3.0e-179 631.7 318 100.0
Dinv35002 Davidia involucrata HOM05D006434 ORTHO05D008069 7.5e-130 467.6 320 74.4
TAR629G3263 Trochodendron aralioides HOM05D006434 ORTHO05D008069 5.2e-123 444.9 297 76.4
Cfa007492 Carpinus fangiana HOM05D006434 ORTHO05D008069 2.9e-121 439.1 306 75.2
COL.COLO4_36989 Corchorus olitorius HOM05D006434 ORTHO05D008069 2.9e-121 439.1 322 70.8
Actinidia06053 Actinidia chinensis HOM05D006434 ORTHO05D008069 4.9e-121 438.3 308 70.8
RcHm_v2.0_Chr2g0169691 Rosa chinensis HOM05D006434 ORTHO05D008069 1.4e-120 436.8 298 75.2
CSS0004781 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 4.1e-120 435.3 325 68.9
Potri.001G349800 Populus trichocarpa HOM05D006434 ORTHO05D008069 4.1e-120 435.3 323 70.6
GSVIVG01032566001 Vitis vinifera HOM05D006434 ORTHO05D008069 9.2e-120 434.1 318 71.1
Atru.chr8.2465 Acer truncatum HOM05D006434 ORTHO05D008069 1.2e-119 433.7 320 70.6
CsaV3_5G037720 Cucumis sativus L. HOM05D006434 ORTHO05D008069 1.6e-119 433.3 318 71.1
CSS0040499 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 2.1e-119 433.0 336 66.7
Aqoxy3G00846 Aquilegia oxysepala HOM05D006434 ORTHO05D008069 1.0e-118 430.6 282 75.2
MELO3C021484.2 Cucumis melo HOM05D006434 ORTHO05D008069 5.1e-118 428.3 319 70.2
PGR142G2438 Punica granatum HOM05D006434 ORTHO05D008069 1.1e-117 427.2 318 69.5
Sed0011674 Sechium edule HOM05D006434 ORTHO05D008069 1.1e-117 427.2 320 69.4
Manes.15G178000 Manihot esculenta HOM05D006434 ORTHO05D008069 1.5e-117 426.8 313 69.3
FAN14G5872 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.9e-117 426.4 320 70.9
vmacro05779 Vaccinium macrocarpon HOM05D006434 ORTHO05D008069 2.5e-117 426.0 323 68.7
Duzib264G0249 Durio zibethinus HOM05D006434 ORTHO05D008069 3.3e-117 425.6 324 68.8
Rhsim10G0029400 Rhododendron simsii HOM05D006434 ORTHO05D008069 4.3e-117 425.2 321 69.2
CAN.G1128.11 Capsicum annuum HOM05D006434 ORTHO05D008069 5.6e-117 424.9 324 68.5
FvH4_6g49670 Fragaria vesca HOM05D006434 ORTHO05D008069 1.2e-116 423.7 320 70.6
Ciclev10012231m.g Citrus clementina HOM05D006434 ORTHO05D008069 2.1e-116 422.9 305 71.5
FAN05G1688 Fragaria x ananassa HOM05D006434 ORTHO05D008069 2.8e-116 422.5 306 71.9
Nn1g08819 Nelumbo nucifera HOM05D006434 ORTHO05D008069 2.8e-116 422.5 278 76.3
MD09G1042700 Malus domestica HOM05D006434 ORTHO05D008069 3.6e-116 422.2 319 70.8
PGSC0003DMG400006900 Solanum tuberosum HOM05D006434 ORTHO05D008069 3.6e-116 422.2 312 69.9
Hma1.2p1_0136F.1_g062090 Hydrangea macrophylla HOM05D006434 ORTHO05D008069 6.2e-116 421.4 257 78.6
TWI56G0494 Tripterygium wilfordii HOM05D006434 ORTHO05D008069 6.2e-116 421.4 313 67.7
FAN02G4063 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.1e-115 420.6 301 72.4
Thecc.04G069300 Theobroma cacao HOM05D006434 ORTHO05D008069 1.1e-115 420.6 292 71.9
Sabra16G0229200 Salix brachista HOM05D006434 ORTHO05D008069 1.4e-115 420.2 323 67.8
Solyc02g067540.3 Solanum lycopersicum HOM05D006434 ORTHO05D008069 5.2e-115 418.3 324 67.6
Sopen02g016670 Solanum pennellii HOM05D006434 ORTHO05D008069 5.2e-115 418.3 324 67.6
Gohir.A07G216800 Gossypium hirsutum HOM05D006434 ORTHO05D008069 1.5e-114 416.8 300 71.0
Gorai.001G257900 Gossypium raimondii HOM05D006434 ORTHO05D008069 1.5e-114 416.8 300 71.0
Nitab4.5_0001727g0150 Nicotiana tabacum HOM05D006434 ORTHO05D008069 1.5e-114 416.8 315 67.6
Gohir.D07G223600 Gossypium hirsutum HOM05D006434 ORTHO05D008069 4.4e-114 415.2 300 71.0
Phvul.004G023900 Phaseolus vulgaris HOM05D006434 ORTHO05D008069 4.4e-114 415.2 318 70.1
Eucgr.I01896 Eucalyptus grandis HOM05D006434 ORTHO05D008069 9.9e-114 414.1 288 71.5
QL02p079411 Quercus lobata HOM05D006434 ORTHO05D008069 3.5e-111 405.6 302 71.5
Glyma.13G066900 Glycine max HOM05D006434 ORTHO05D008069 3.0e-110 402.5 318 67.9
Oeu022866.3 Olea europaea HOM05D006434 ORTHO05D008069 5.1e-110 401.7 358 60.9
Cc07_g02850 Coffea canephora HOM05D006434 ORTHO05D008069 6.6e-110 401.4 277 71.5
Lj2g0012157 Lotus japonicus HOM05D006434 ORTHO05D008069 2.5e-109 399.4 319 68.0
PSO161G0076 Papaver somniferum HOM05D006434 ORTHO05D008069 4.3e-109 398.7 265 73.2
PSO478G2838 Papaver somniferum HOM05D006434 ORTHO05D008069 5.6e-109 398.3 312 66.3
Sc10g0004040 Simmondsia chinensis HOM05D006434 ORTHO05D008069 3.6e-108 395.6 258 73.6
AUR62018326 Chenopodium quinoa HOM05D006434 ORTHO05D008069 1.4e-107 393.7 314 63.1
Peaxi162Scf00059g00128 Petunia axillaris HOM05D006434 ORTHO05D008069 5.2e-107 391.7 295 67.8
Migut.H00876 Erythranthe guttata HOM05D006434 ORTHO05D008069 1.5e-106 390.2 303 67.0
VMungo0464G0451 Vigna mungo HOM05D006434 ORTHO05D008069 2.6e-106 389.4 320 66.2
Lalb_Chr21g0319131 Lupinus albus HOM05D006434 ORTHO05D008069 9.9e-106 387.5 324 66.0
SGA_v2.0_scaffold205G41750 Striga asiatica HOM05D006434 ORTHO05D008069 1.7e-105 386.7 316 62.0
ATR0665G567 Amborella trichopoda HOM05D006434 ORTHO05D008069 2.2e-105 386.3 304 64.5
CiPaw.03G032300 Carya illinoinensis HOM05D006434 ORTHO05D008069 8.4e-105 384.4 291 71.5
arahy.Tifrunner.gnm1.ann1.X2C98S Arachis hypogaea HOM05D006434 ORTHO05D008069 1.9e-104 383.3 318 66.7
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 4.2e-104 382.1 292 68.8
TPR.G32608 Trifolium pratense HOM05D006434 ORTHO05D008069 4.2e-104 382.1 309 68.0
arahy.Tifrunner.gnm1.ann1.ICRE53 Arachis hypogaea HOM05D006434 ORTHO05D008069 9.3e-104 380.9 316 66.8
Medtr6g009400 Medicago truncatula HOM05D006434 ORTHO05D008069 9.3e-104 380.9 321 65.7
MSTRG.23964 Avicennia marina HOM05D006434 ORTHO05D008069 1.6e-103 380.2 268 70.5
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 1.3e-102 377.1 311 64.6
FAN09G0258 Fragaria x ananassa HOM05D006434 ORTHO05D008069 3.0e-102 375.9 279 71.0
Lsat_1_v5_gn_4_180280 Lactuca sativa HOM05D006434 ORTHO05D008069 6.6e-102 374.8 330 63.0
DCAR_006717 Daucus carota HOM05D006434 ORTHO05D008069 1.1e-101 374.0 227 77.5
EL10Ac2g02902 Beta vulgaris HOM05D006434 ORTHO05D008069 5.6e-101 371.7 338 58.9
HanXRQChr15g0488521 Helianthus annuus HOM05D006434 ORTHO05D008069 2.1e-100 369.8 257 72.8
AUR62030560 Chenopodium quinoa HOM05D006434 ORTHO05D008069 8.1e-100 367.9 328 60.7
THA.LOC104823923 Tarenaya hassleriana HOM05D006434 ORTHO05D008069 8.1e-100 367.9 314 61.1
Aa31LG2G4610 Aethionema arabicum HOM05D006434 ORTHO05D008069 2.4e-99 366.3 286 67.8
Sp2g17230 Schrenkiella parvula HOM05D006434 ORTHO05D008069 2.0e-98 363.2 319 62.4
Carub.0005s0699 Capsella rubella HOM05D006434 ORTHO05D008069 2.6e-98 362.8 318 62.3
Thhalv10004634m.g Eutrema salsugineum HOM05D006434 ORTHO05D008069 3.4e-98 362.5 274 68.2
Prupe.3G275100 Prunus persica HOM05D006434 ORTHO05D008069 3.4e-98 362.5 273 70.0
AL5G18090 Arabidopsis lyrata HOM05D006434 ORTHO05D008069 4.5e-98 362.1 297 62.6
CARHR292500 Cardamine hirsuta HOM05D006434 ORTHO05D008069 7.6e-98 361.3 321 63.6
CDE02G1577 Ceratophyllum demersum HOM05D006434 ORTHO05D008069 2.2e-97 359.8 262 68.3
unitig_744.g24344 Utricularia gibba HOM05D006434 ORTHO05D008069 1.4e-96 357.1 261 68.6
BcaC06g33735 Brassica carinata HOM05D006434 ORTHO05D008069 1.9e-96 356.7 298 64.1
Glyma.19G017500 Glycine max HOM05D006434 ORTHO05D008069 3.2e-96 355.9 197 85.8
C07p37520 Brassica napus HOM05D006434 ORTHO05D008069 3.5e-95 352.4 300 63.7
Psat1g076480 Pisum sativum HOM05D006434 ORTHO05D008069 3.5e-95 352.4 279 65.2
BolC7t44265H Brassica oleracea HOM05D006434 ORTHO05D008069 7.9e-95 351.3 322 61.5
A06p40510 Brassica napus HOM05D006434 ORTHO05D008069 3.0e-94 349.4 322 60.2
BraA06t26970Z Brassica rapa HOM05D006434 ORTHO05D008069 3.0e-94 349.4 322 60.2
Haze_14607 Corylus avellana HOM05D006434 ORTHO05D008069 5.3e-91 338.6 282 66.7
CSS0001127 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 3.4e-90 335.9 215 74.4
HPP92_023566 Vanilla planifolia HOM05D006434 ORTHO05D008069 4.5e-90 335.5 324 54.6
Os03g0736400 Oryza sativa ssp. japonica HOM05D006434 ORTHO05D008069 7.6e-90 334.7 259 61.4
CSS0033350 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 5.5e-88 328.6 213 74.2
Nitab4.5_0003431g0070 Nicotiana tabacum HOM05D006434 ORTHO05D008069 1.2e-79 300.8 176 79.5
Ca_04243_v3 Cicer arietinum L. HOM05D006434 ORTHO05D008069 1.6e-79 300.4 225 67.1
AT3G28460 Arabidopsis thaliana HOM05D006434 ORTHO05D008069 1.8e-78 297.0 257 61.9
Cpa.g.sc14.62 Carica papaya HOM05D006434 ORTHO05D008069 1.8e-78 297.0 176 81.2
SalBow1G5247 Salvia bowleyana HOM05D006434 ORTHO05D008069 3.9e-78 295.8 299 53.5
Zm00001eb215320 Zea mays HOM05D006434 ORTHO05D008069 1.5e-74 283.9 262 55.3
Lj7A404T37 Lonicera japonica HOM05D006434 ORTHO05D008069 1.7e-73 280.4 238 64.7
CSS0043817 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 3.8e-73 279.3 187 71.7
MBI01_g13068_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 1.0e-65 254.6 218 62.4
SMO171G0075 Selaginella moellendorffii HOM05D006434 ORTHO05D008069 9.4e-64 248.1 200 58.5
Pp3c7_630 Physcomitrium patens HOM05D006434 ORTHO05D008069 3.0e-62 243.0 233 54.5
AagrBONN_evm.TU.Sc2ySwM_344.3988 Anthoceros agrestis HOM05D006434 ORTHO05D008069 1.1e-61 241.1 196 59.2
Hund13291 Selenicereus undatus HOM05D006434 ORTHO05D008069 1.1e-56 224.6 236 55.1
Mapoly0140s0031 Marchantia polymorpha HOM05D006434 ORTHO05D008069 3.2e-56 223.0 210 53.3
CBR_g31858 Chara braunii HOM05D006434 ORTHO05D008069 1.1e-51 208.0 245 47.3
SEGI_25544 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 2.2e-44 183.7 164 54.9
PRCOL_00006620 Prasinoderma coloniale HOM05D006434 ORTHO05D008069 6.5e-41 172.2 237 40.5
SEGI_38692 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 9.4e-40 168.3 125 61.6
Cre13.g566300 Chlamydomonas reinhardtii HOM05D006434 ORTHO05D008069 1.6e-39 167.5 202 42.6
Solyc01g057060.1 Solanum lycopersicum HOM05D006434 ORTHO05D008069 8.0e-31 138.7 97 69.1
Sopen01g021310 Solanum pennellii HOM05D006434 ORTHO05D008069 1.0e-30 138.3 91 75.8
MBI01_g13070_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 5.2e-30 136.0 83 74.7
MCO03G139 Micromonas commoda HOM05D006434 ORTHO05D008069 6.8e-30 135.6 120 55.0
MD17G1044100 Malus domestica HOM05D006434 ORTHO05D008069 1.5e-24 117.9 61 91.8
TAR371G0222 Trochodendron aralioides HOM05D006434 ORTHO05D008069 1.4e-22 111.3 75 74.7
Lj7A404T38 Lonicera japonica HOM05D006434 ORTHO05D008069 3.0e-09 67.0 134 32.8
Lsat_1_v5_gn_7_34121 Lactuca sativa HOM05D006434 ORTHO05D008069 5.1e-09 66.2 37 81.1
Cpa.g.sc14.61 Carica papaya HOM05D006434 ORTHO05D008069 5.6e-08 62.8 117 40.2


User provided reference genes

Program Settings