Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2071 Cannabis sativa HOM05D006484 ORTHO05D008002 1.9e-156 555.8 290 100.0
RcHm_v2.0_Chr2g0171411 Rosa chinensis HOM05D006484 ORTHO05D008002 3.6e-102 375.6 301 67.1
FAN14G3872 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.8e-101 373.2 300 65.7
Prupe.3G283800 Prunus persica HOM05D006484 ORTHO05D008002 3.0e-101 372.5 270 71.1
FAN02G1518 Fragaria x ananassa HOM05D006484 ORTHO05D008002 3.9e-101 372.1 300 65.7
FvH4_6g50620 Fragaria vesca HOM05D006484 ORTHO05D008002 5.1e-101 371.7 300 65.7
Thecc.04G008700 Theobroma cacao HOM05D006484 ORTHO05D008002 1.9e-100 369.8 269 71.4
COL.COLO4_28946 Corchorus olitorius HOM05D006484 ORTHO05D008002 4.3e-100 368.6 269 71.7
CiPaw.03G037700 Carya illinoinensis HOM05D006484 ORTHO05D008002 7.4e-100 367.9 300 67.3
ClCG10G014230 Citrullus lanatus HOM05D006484 ORTHO05D008002 7.4e-100 367.9 284 71.5
MD17G1035000 Malus domestica HOM05D006484 ORTHO05D008002 1.3e-99 367.1 300 64.7
Haze_14667 Corylus avellana HOM05D006484 ORTHO05D008002 1.6e-99 366.7 297 67.7
Duzib147G0204 Durio zibethinus HOM05D006484 ORTHO05D008002 2.8e-99 365.9 287 67.9
THA.LOC104805398 Tarenaya hassleriana HOM05D006484 ORTHO05D008002 3.7e-99 365.5 268 71.3
PGR142G1659 Punica granatum HOM05D006484 ORTHO05D008002 1.1e-98 364.0 292 65.8
TAR629G1796 Trochodendron aralioides HOM05D006484 ORTHO05D008002 1.8e-98 363.2 304 66.1
CsaV3_3G042410 Cucumis sativus L. HOM05D006484 ORTHO05D008002 2.4e-98 362.8 291 68.4
FAN09G0334 Fragaria x ananassa HOM05D006484 ORTHO05D008002 3.1e-98 362.5 310 63.2
MELO3C009955.2 Cucumis melo HOM05D006484 ORTHO05D008002 4.1e-98 362.1 291 68.4
Potri.017G073000 Populus trichocarpa HOM05D006484 ORTHO05D008002 5.3e-98 361.7 295 67.5
Dinv33496 Davidia involucrata HOM05D006484 ORTHO05D008002 6.9e-98 361.3 288 67.7
Cfa007430 Carpinus fangiana HOM05D006484 ORTHO05D008002 1.2e-97 360.5 297 66.0
Ciclev10016148m.g Citrus clementina HOM05D006484 ORTHO05D008002 1.2e-97 360.5 288 67.0
Gohir.D11G071200 Gossypium hirsutum HOM05D006484 ORTHO05D008002 1.2e-97 360.5 270 69.3
Gorai.007G076500 Gossypium raimondii HOM05D006484 ORTHO05D008002 1.2e-97 360.5 270 69.3
QL02p076682 Quercus lobata HOM05D006484 ORTHO05D008002 1.5e-97 360.1 294 67.3
TPR.G2295 Trifolium pratense HOM05D006484 ORTHO05D008002 2.0e-97 359.8 294 63.9
Gohir.A11G067300 Gossypium hirsutum HOM05D006484 ORTHO05D008002 4.5e-97 358.6 270 68.9
FAN05G1767 Fragaria x ananassa HOM05D006484 ORTHO05D008002 7.7e-97 357.8 334 59.9
Manes.17G122200 Manihot esculenta HOM05D006484 ORTHO05D008002 5.0e-96 355.1 258 71.7
arahy.Tifrunner.gnm1.ann1.ND36BV Arachis hypogaea HOM05D006484 ORTHO05D008002 6.5e-96 354.8 290 66.2
arahy.Tifrunner.gnm1.ann1.J6NIZK Arachis hypogaea HOM05D006484 ORTHO05D008002 8.5e-96 354.4 290 66.2
CSS0043741 Camellia sinensis var. sinensis HOM05D006484 ORTHO05D008002 1.4e-95 353.6 300 66.7
TWI56G0797 Tripterygium wilfordii HOM05D006484 ORTHO05D008002 1.9e-95 353.2 291 66.0
Sed0007993 Sechium edule HOM05D006484 ORTHO05D008002 2.5e-95 352.8 289 66.4
MSTRG.15510 Avicennia marina HOM05D006484 ORTHO05D008002 2.1e-94 349.7 284 66.9
GSVIVG01032484001 Vitis vinifera HOM05D006484 ORTHO05D008002 2.1e-94 349.7 231 74.0
Rhsim08G0055200 Rhododendron simsii HOM05D006484 ORTHO05D008002 4.6e-94 348.6 298 62.4
Lsat_1_v5_gn_0_26201 Lactuca sativa HOM05D006484 ORTHO05D008002 6.1e-94 348.2 290 64.1
C08p30440 Brassica napus HOM05D006484 ORTHO05D008002 1.4e-93 347.1 288 63.2
Lj2g0018435 Lotus japonicus HOM05D006484 ORTHO05D008002 3.0e-93 345.9 292 62.3
AT3G55250 Arabidopsis thaliana HOM05D006484 ORTHO05D008002 3.9e-93 345.5 285 63.9
Eucgr.I01814 Eucalyptus grandis HOM05D006484 ORTHO05D008002 5.1e-93 345.1 289 63.7
BraA09t40274Z Brassica rapa HOM05D006484 ORTHO05D008002 6.7e-93 344.7 288 62.5
BolC8t50667H Brassica oleracea HOM05D006484 ORTHO05D008002 1.1e-92 344.0 288 62.5
BcaC02g09737 Brassica carinata HOM05D006484 ORTHO05D008002 1.5e-92 343.6 286 62.9
C04p37040 Brassica napus HOM05D006484 ORTHO05D008002 1.5e-92 343.6 286 62.9
BolC4t25282H Brassica oleracea HOM05D006484 ORTHO05D008002 1.5e-92 343.6 286 62.9
Ca_04198_v3 Cicer arietinum L. HOM05D006484 ORTHO05D008002 1.5e-92 343.6 237 70.9
Aqoxy3G01007 Aquilegia oxysepala HOM05D006484 ORTHO05D008002 2.0e-92 343.2 290 63.8
BcaB02g08436 Brassica carinata HOM05D006484 ORTHO05D008002 2.0e-92 343.2 292 63.4
BcaC07g39842 Brassica carinata HOM05D006484 ORTHO05D008002 2.6e-92 342.8 284 63.0
CARHR165250 Cardamine hirsuta HOM05D006484 ORTHO05D008002 2.6e-92 342.8 286 63.3
Lj7A591T78 Lonicera japonica HOM05D006484 ORTHO05D008002 2.6e-92 342.8 245 71.8
Sp5g07210 Schrenkiella parvula HOM05D006484 ORTHO05D008002 2.6e-92 342.8 289 63.3
A09p48180 Brassica napus HOM05D006484 ORTHO05D008002 4.4e-92 342.0 288 62.5
ECA246G1918 Erigeron canadensis HOM05D006484 ORTHO05D008002 4.4e-92 342.0 235 72.8
MBI16_g26453_MAGBIO Magnolia biondii HOM05D006484 ORTHO05D008002 9.7e-92 340.9 289 62.3
Sabra16G0230700 Salix brachista HOM05D006484 ORTHO05D008002 9.7e-92 340.9 291 65.6
AL5G36370 Arabidopsis lyrata HOM05D006484 ORTHO05D008002 1.7e-91 340.1 285 62.8
Migut.K01368 Erythranthe guttata HOM05D006484 ORTHO05D008002 2.2e-91 339.7 283 63.6
Lalb_Chr21g0319431 Lupinus albus HOM05D006484 ORTHO05D008002 2.2e-91 339.7 235 71.9
SalBow7G4444 Salvia bowleyana HOM05D006484 ORTHO05D008002 2.8e-91 339.3 283 64.3
HanXRQChr15g0474541 Helianthus annuus HOM05D006484 ORTHO05D008002 3.7e-91 339.0 289 64.4
Hma1.2p1_0802F.1_g220370 Hydrangea macrophylla HOM05D006484 ORTHO05D008002 3.7e-91 339.0 293 62.1
A04p04700 Brassica napus HOM05D006484 ORTHO05D008002 6.3e-91 338.2 274 65.7
BraA04t16182Z Brassica rapa HOM05D006484 ORTHO05D008002 6.3e-91 338.2 274 65.7
Nitab4.5_0003337g0080 Nicotiana tabacum HOM05D006484 ORTHO05D008002 8.2e-91 337.8 297 63.0
Carub.0005s2191 Capsella rubella HOM05D006484 ORTHO05D008002 1.4e-90 337.0 285 62.8
Cc07_g02300 Coffea canephora HOM05D006484 ORTHO05D008002 2.4e-90 336.3 230 72.6
Nitab4.5_0005176g0030 Nicotiana tabacum HOM05D006484 ORTHO05D008002 9.1e-90 334.3 296 62.8
Medtr6g007180 Medicago truncatula HOM05D006484 ORTHO05D008002 1.5e-89 333.6 241 68.0
Glyma.19G009200 Glycine max HOM05D006484 ORTHO05D008002 2.6e-89 332.8 251 65.3
Peaxi162Scf00129g00106 Petunia axillaris HOM05D006484 ORTHO05D008002 2.6e-89 332.8 288 61.8
Psat1g058640 Pisum sativum HOM05D006484 ORTHO05D008002 3.4e-89 332.4 229 69.4
Sopen02g031660 Solanum pennellii HOM05D006484 ORTHO05D008002 4.5e-89 332.0 288 63.9
Glyma.13G169000 Glycine max HOM05D006484 ORTHO05D008002 1.0e-88 330.9 244 66.4
SGA_v2.0_scaffold30G12470 Striga asiatica HOM05D006484 ORTHO05D008002 1.0e-88 330.9 281 63.0
Solyc02g086890.3 Solanum lycopersicum HOM05D006484 ORTHO05D008002 1.3e-88 330.5 288 63.5
PSO832G1464 Papaver somniferum HOM05D006484 ORTHO05D008002 5.0e-88 328.6 243 68.3
unitig_88.g27777 Utricularia gibba HOM05D000190 ORTHO05D000113 5.0e-88 328.6 254 65.4
PSO063G6163 Papaver somniferum HOM05D006484 ORTHO05D008002 6.5e-88 328.2 280 62.1
Thhalv10010599m.g Eutrema salsugineum HOM05D006484 ORTHO05D008002 8.5e-88 327.8 288 61.1
Hund05806 Selenicereus undatus HOM05D006484 ORTHO05D008002 8.5e-88 327.8 245 67.3
EL10Ac6g14629 Beta vulgaris HOM05D006484 ORTHO05D008002 1.1e-87 327.4 245 67.3
DCAR_021681 Daucus carota HOM05D006484 ORTHO05D008002 2.5e-87 326.2 322 55.9
VMungo0464G2075 Vigna mungo HOM05D006484 ORTHO05D008002 3.2e-87 325.9 274 62.4
Aa31LG10G9850 Aethionema arabicum HOM05D006484 ORTHO05D008002 3.6e-86 322.4 303 57.8
Phvul.004G016700 Phaseolus vulgaris HOM05D006484 ORTHO05D008002 6.1e-86 321.6 249 64.7
PGSC0003DMG401000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 1.1e-84 317.4 226 69.9
PGSC0003DMG402000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 1.1e-84 317.4 226 69.9
Ah.02g127510 Amaranthus hybridus HOM05D006484 ORTHO05D008002 5.7e-84 315.1 222 71.2
Sc10g0003790 Simmondsia chinensis HOM05D006484 ORTHO05D008002 1.5e-79 300.4 261 60.2
Os05g0526200 Oryza sativa ssp. japonica HOM05D006484 ORTHO05D008002 1.2e-78 297.4 247 63.2
CDE05G1394 Ceratophyllum demersum HOM05D001719 ORTHO05D008883 1.6e-78 297.0 222 64.0
ATR0730G086 Amborella trichopoda HOM05D006484 ORTHO05D008002 2.1e-78 296.6 230 64.3
Nn4g22800 Nelumbo nucifera HOM05D006484 ORTHO05D008002 2.1e-78 296.6 296 58.1
BcaB01g00117 Brassica carinata HOM05D006484 ORTHO05D008002 2.5e-71 273.1 287 55.4
HPP92_024318 Vanilla planifolia HOM05D006484 ORTHO05D008002 9.8e-68 261.2 238 59.2
Actinidia35740 Actinidia chinensis HOM05D006484 ORTHO05D008002 7.0e-66 255.0 213 61.5
vmacro18241 Vaccinium macrocarpon HOM05D006484 ORTHO05D008002 2.0e-57 226.9 295 48.1
AUR62007841 Chenopodium quinoa HOM05D006484 ORTHO05D008002 3.8e-56 222.6 285 45.3
Cpa.g.sc39.92 Carica papaya HOM05D006484 ORTHO05D008002 1.5e-55 220.7 163 70.6
BolC3t16636H Brassica oleracea HOM05D006484 ORTHO05D008002 2.2e-51 206.8 185 58.9
AagrBONN_evm.TU.Sc2ySwM_344.2636 Anthoceros agrestis HOM05D006484 ORTHO05D008002 1.6e-49 200.7 203 50.2
Zm00001eb215070 Zea mays HOM05D006484 ORTHO05D008002 1.7e-48 197.2 171 59.6
BolC7t43763H Brassica oleracea HOM05D006484 ORTHO05D008002 3.3e-47 193.0 206 52.9
Pp3c21_1380 Physcomitrium patens HOM05D006484 ORTHO05D008002 8.9e-45 184.9 193 47.2
Mapoly0095s0016 Marchantia polymorpha HOM05D006484 ORTHO05D008002 1.3e-43 181.0 193 47.7
SMO165G0092 Selaginella moellendorffii HOM05D006484 ORTHO05D008002 7.0e-42 175.3 192 45.8
AUR62003035 Chenopodium quinoa HOM05D006484 ORTHO05D008002 1.0e-40 171.4 204 47.5
HPP92_024280 Vanilla planifolia HOM05D006484 ORTHO05D008002 3.3e-39 166.4 153 58.2
CBR_g163 Chara braunii HOM05D006484 ORTHO05D008002 7.3e-39 165.2 192 44.3
Atru.chr6.2293 Acer truncatum HOM05D006484 ORTHO05D008002 7.8e-33 145.2 87 75.9
CAN.G473.120 Capsicum annuum HOM05D006484 ORTHO05D008002 4.0e-29 132.9 122 57.4
CAN.G685.18 Capsicum annuum HOM05D006484 ORTHO05D008002 1.7e-24 117.5 91 65.9
Atru.chr6.2294 Acer truncatum HOM05D006484 ORTHO05D008002 5.1e-24 115.9 87 64.4
MD09G1034600 Malus domestica HOM05D006484 ORTHO05D000001 5.1e-24 115.9 91 63.7
BcaC06g34142 Brassica carinata HOM05D006484 ORTHO05D008002 1.9e-23 114.0 148 47.3
arahy.Tifrunner.gnm1.ann1.QWBN9A Arachis hypogaea HOM05D006484 ORTHO05D008002 2.3e-16 90.5 60 68.3
TPR.G33278 Trifolium pratense HOM05D006484 ORTHO05D008002 3.1e-13 80.1 51 72.5
Cre03.g183400 Chlamydomonas reinhardtii HOM05D006484 ORTHO05D008002 2.0e-12 77.4 224 25.4
MD09G1034700 Malus domestica HOM05D006484 ORTHO05D008002 5.8e-12 75.9 106 50.0
arahy.Tifrunner.gnm1.ann1.5V94PQ Arachis hypogaea HOM05D005791 ORTHO05D008002 1.1e-07 61.6 34 82.4
PRCOL_00006041 Prasinoderma coloniale HOM05D006484 ORTHO05D008002 3.3e-07 60.1 138 31.9
MCO09G217 Micromonas commoda HOM05D006484 ORTHO05D008002 1.6e-06 57.8 170 27.1


User provided reference genes

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