Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2013 Cannabis sativa HOM05D008488 ORTHO05D000385 2.0e-156 555.8 305 100.0
CANSAT11G0213 Cannabis sativa HOM05D001309 ORTHO05D000385 1.5e-114 416.8 300 74.7
CANSAT21G2150 Cannabis sativa HOM05D001309 ORTHO05D000385 1.9e-101 373.2 298 67.4
CANSAT64G1238 Cannabis sativa HOM05D001309 ORTHO05D000385 1.4e-80 303.9 173 100.0
CANSAT35G0020 Cannabis sativa HOM05D001309 ORTHO05D000385 2.3e-75 286.6 301 53.8
CSS0030327 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 7.4e-42 175.3 285 39.6
CSS0016301 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.3e-41 174.5 285 38.9
CSS0018077 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.3e-41 172.2 284 39.1
CSS0040510 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 9.1e-40 168.3 287 39.0
CSS0014937 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.9e-38 163.3 293 38.6
CSS0000994 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.8e-38 162.9 285 37.5
CSS0004008 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.4e-34 149.4 285 36.1
vmacro22655 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 2.6e-26 123.6 292 33.9
vmacro21586 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 4.4e-26 122.9 243 35.4
vmacro21926 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.7e-25 120.9 239 36.0
vmacro23420 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.7e-25 120.9 239 36.0
vmacro03917 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 8.2e-25 118.6 219 36.5
ECA246G0609 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.3e-19 100.5 289 29.8
ECA327G0002 Erigeron canadensis HOM05D008488 ORTHO05D000385 3.0e-19 100.1 289 28.0
ECA233G0549 Erigeron canadensis HOM05D008488 ORTHO05D000385 6.7e-19 99.0 287 28.6
MBI02_g35833_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.8e-19 98.6 269 29.4
ECA246G4823 Erigeron canadensis HOM05D008488 ORTHO05D000385 4.4e-18 96.3 293 26.6
vmacro03942 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 4.4e-18 96.3 219 33.8
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 4.8e-17 92.8 295 31.9
HanXRQChr14g0434671 Helianthus annuus HOM05D008488 ORTHO05D000385 2.4e-16 90.5 244 28.7
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.4e-16 90.5 295 30.8
HanXRQChr03g0071501 Helianthus annuus HOM05D008488 ORTHO05D000385 4.5e-15 86.3 218 28.9
ECA164G0002 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.2e-14 84.0 283 26.1
vmacro09403 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 3.8e-14 83.2 85 47.1
ECA234G1560 Erigeron canadensis HOM05D008488 ORTHO05D000385 5.0e-14 82.8 218 28.0
ECA234G2194 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.5e-13 81.3 291 26.5
ECA234G1460 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.5e-13 80.5 83 42.2
MBI15_g16946_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.2e-13 79.7 255 28.6
ECA234G3995 Erigeron canadensis HOM05D008488 ORTHO05D000385 7.2e-13 79.0 218 27.1
ECA247G3403 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.7e-12 77.0 226 28.3
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.0e-11 73.6 249 27.3
ECA233G1871 Erigeron canadensis HOM05D008488 ORTHO05D000385 6.8e-11 72.4 287 24.0
ECA238G3595 Erigeron canadensis HOM05D008488 ORTHO05D000385 8.8e-11 72.0 237 29.5
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 8.8e-11 72.0 205 26.8
MBI01_g25649_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.0e-10 70.9 300 27.3
MBI15_g13426_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.7e-10 69.3 297 27.6
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.5e-10 68.9 319 25.1
ECA127G0002 Erigeron canadensis HOM05D008488 ORTHO05D000385 3.7e-09 66.6 252 27.4
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 4.8e-09 66.2 247 25.9
MBI09_g41431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.8e-09 66.2 210 33.3
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 6.3e-09 65.9 204 27.0
ECA096G0001 Erigeron canadensis HOM05D008488 ORTHO05D000385 1.1e-08 65.1 255 25.9
MBI01_g02357_MAGBIO Magnolia biondii HOM05D008488 ORTHO05D000385 1.1e-08 65.1 72 45.8
MBI09_g23028_MAGBIO Magnolia biondii HOM05D008488 ORTHO05D000385 4.1e-08 63.2 90 43.3
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 4.1e-08 63.2 115 34.8
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 4.1e-08 63.2 289 22.8
MBI19_g42303_MAGBIO Magnolia biondii HOM05D000009 ORTHO05D006588 5.4e-08 62.8 85 43.5
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 3.5e-07 60.1 121 32.2
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 1.7e-06 57.8 120 32.5
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 2.3e-06 57.4 297 25.3
MBI14_g07746_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.3e-06 57.4 81 39.5
MBI18_g39412_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.3e-06 57.4 81 37.0
MBI19_g12819_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.9e-06 57.0 82 36.6
COL.COLO4_07670 Corchorus olitorius HOM05D001309 ORTHO05D000385 3.8e-06 56.6 297 21.9
HanXRQChr09g0254541 Helianthus annuus HOM05D008488 ORTHO05D000385 6.5e-06 55.8 113 35.4
MBI17_g21607_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.5e-06 55.8 331 27.2
MBI01_g25641_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.6e-06 55.5 91 35.2


User provided reference genes

Program Settings