Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2010 Cannabis sativa HOM05D006882 ORTHO05D008688 8.9e-57 223.4 115 100.0
CiPaw.03G088500 Carya illinoinensis HOM05D006882 ORTHO05D008688 3.3e-27 125.2 114 62.3
QL02p067584 Quercus lobata HOM05D006882 ORTHO05D008688 1.6e-26 122.9 114 60.5
Haze_14430 Corylus avellana HOM05D006882 ORTHO05D008688 1.4e-25 119.8 114 60.5
Cfa007668 Carpinus fangiana HOM05D006882 ORTHO05D008688 2.0e-24 115.9 114 59.6
MD09G1066800 Malus domestica HOM05D006882 ORTHO05D008688 3.4e-24 115.2 98 65.3
MD17G1059700 Malus domestica HOM05D006882 ORTHO05D008688 1.7e-23 112.8 101 63.4
Prupe.3G254900 Prunus persica HOM05D006882 ORTHO05D008688 3.8e-23 111.7 107 60.7
TAR371G1018 Trochodendron aralioides HOM05D006882 ORTHO05D008688 1.1e-22 110.2 107 58.9
COL.COLO4_04934 Corchorus olitorius HOM05D006882 ORTHO05D008688 1.4e-22 109.8 115 57.4
PGR004G1649 Punica granatum HOM05D006882 ORTHO05D008688 1.4e-22 109.8 112 57.1
Atru.chr8.430 Acer truncatum HOM05D006882 ORTHO05D008688 1.9e-22 109.4 103 61.2
Eucgr.I02034 Eucalyptus grandis HOM05D006882 ORTHO05D008688 2.5e-22 109.0 93 62.4
Thecc.04G095700 Theobroma cacao HOM05D006882 ORTHO05D008688 2.5e-22 109.0 115 60.0
Gorai.007G082700 Gossypium raimondii HOM05D006882 ORTHO05D008688 4.6e-21 104.8 112 58.0
Duzib187G0261 Durio zibethinus HOM05D006882 ORTHO05D008688 1.0e-20 103.6 115 58.3
vmacro05638 Vaccinium macrocarpon HOM05D006882 ORTHO05D008688 1.8e-20 102.8 114 52.6
VMungo0464G1672 Vigna mungo HOM05D006882 ORTHO05D008688 1.8e-20 102.8 114 52.6
arahy.Tifrunner.gnm1.ann1.YR6PCG Arachis hypogaea HOM05D006882 ORTHO05D008688 2.3e-20 102.4 116 56.0
Gohir.D11G077000 Gossypium hirsutum HOM05D006882 ORTHO05D008688 2.3e-20 102.4 112 57.1
arahy.Tifrunner.gnm1.ann1.PJ6ZH1 Arachis hypogaea HOM05D006882 ORTHO05D008688 3.0e-20 102.1 116 56.0
FAN05G2472 Fragaria x ananassa HOM05D006882 ORTHO05D008688 6.7e-20 100.9 94 60.6
Glyma.19G030100 Glycine max HOM05D006882 ORTHO05D008688 6.7e-20 100.9 115 54.8
Manes.01G096000 Manihot esculenta HOM05D006882 ORTHO05D008688 6.7e-20 100.9 108 55.6
GSVIVG01032906001 Vitis vinifera HOM05D006882 ORTHO05D008688 6.7e-20 100.9 115 54.8
Gohir.A11G072700 Gossypium hirsutum HOM05D006882 ORTHO05D008688 1.1e-19 100.1 112 56.2
Dinv34941 Davidia involucrata HOM05D006882 ORTHO05D008688 1.5e-19 99.8 114 54.4
Duzib147G0673 Durio zibethinus HOM05D006882 ORTHO05D008688 1.5e-19 99.8 82 68.3
Potri.017G094200 Populus trichocarpa HOM05D006882 ORTHO05D008688 1.5e-19 99.8 110 51.8
FvH4_6g46850 Fragaria vesca HOM05D006882 ORTHO05D008688 3.3e-19 98.6 103 58.3
RcHm_v2.0_Chr2g0165841 Rosa chinensis HOM05D006882 ORTHO05D008688 3.3e-19 98.6 103 61.2
FAN02G1963 Fragaria x ananassa HOM05D006882 ORTHO05D008688 4.3e-19 98.2 96 58.3
FAN09G3572 Fragaria x ananassa HOM05D006882 ORTHO05D008688 4.3e-19 98.2 96 59.4
FAN14G0989 Fragaria x ananassa HOM05D006882 ORTHO05D008688 4.3e-19 98.2 96 59.4
Hma1.2p1_0481F.1_g162213 Hydrangea macrophylla HOM05D006882 ORTHO05D008688 5.7e-19 97.8 102 60.8
Lalb_Chr06g0174961 Lupinus albus HOM05D006882 ORTHO05D008688 5.7e-19 97.8 99 58.6
AL3G11350 Arabidopsis lyrata HOM05D006882 ORTHO05D008688 9.7e-19 97.1 117 51.3
Sabra17G0083000 Salix brachista HOM05D006882 ORTHO05D008688 9.7e-19 97.1 110 52.7
THA.LOC104822332 Tarenaya hassleriana HOM05D006882 ORTHO05D008688 1.3e-18 96.7 70 71.4
Ciclev10003470m.g Citrus clementina HOM05D006882 ORTHO05D008688 2.8e-18 95.5 119 50.4
Glyma.13G056500 Glycine max HOM05D006882 ORTHO05D008688 3.7e-18 95.1 106 55.7
Duzib264G0735 Durio zibethinus HOM05D006882 ORTHO05D008688 6.3e-18 94.4 86 62.8
AT3G02120 Arabidopsis thaliana HOM05D006882 ORTHO05D008688 8.2e-18 94.0 117 49.6
Phvul.004G037300 Phaseolus vulgaris HOM05D006882 ORTHO05D008688 8.2e-18 94.0 110 52.7
Sp3g01180 Schrenkiella parvula HOM05D006882 ORTHO05D008688 8.2e-18 94.0 115 49.6
Lj2g0004633 Lotus japonicus HOM05D006882 ORTHO05D008688 1.1e-17 93.6 113 50.4
Potri.004G120200 Populus trichocarpa HOM05D006882 ORTHO05D008688 1.8e-17 92.8 64 70.3
Dinv33828 Davidia involucrata HOM05D006882 ORTHO05D008688 2.4e-17 92.4 84 65.5
Cpa.g.sc14.176 Carica papaya HOM05D006882 ORTHO05D008688 3.1e-17 92.0 97 58.8
CARHR076080 Cardamine hirsuta HOM05D006882 ORTHO05D008688 4.1e-17 91.7 114 50.9
Ciclev10027312m.g Citrus clementina HOM05D006882 ORTHO05D008688 5.3e-17 91.3 116 47.4
Glyma.01G085200 Glycine max HOM05D006882 ORTHO05D008688 5.3e-17 91.3 105 54.3
Psat1g068840 Pisum sativum HOM05D006882 ORTHO05D008688 5.3e-17 91.3 118 46.6
Ciclev10003349m.g Citrus clementina HOM05D006882 ORTHO05D008688 2.0e-16 89.4 116 46.6
TPR.G10007 Trifolium pratense HOM05D006882 ORTHO05D008688 2.0e-16 89.4 119 47.9
Aa31LG5G12650 Aethionema arabicum HOM05D006882 ORTHO05D008688 3.4e-16 88.6 115 48.7
Cc07_g04230 Coffea canephora HOM05D006882 ORTHO05D008688 4.5e-16 88.2 112 48.2
TWI60G1503 Tripterygium wilfordii HOM05D006882 ORTHO05D008688 7.7e-16 87.4 114 50.9
Ciclev10013137m.g Citrus clementina HOM05D006882 ORTHO05D008688 1.0e-15 87.0 119 49.6
Carub.0003s0123 Capsella rubella HOM05D006882 ORTHO05D008688 1.3e-15 86.7 119 49.6
Gohir.D09G008650 Gossypium hirsutum HOM05D006882 ORTHO05D008688 1.3e-15 86.7 72 62.5
Oeu062161.1 Olea europaea HOM05D006882 ORTHO05D008688 1.7e-15 86.3 117 48.7
Rhsim10G0049600 Rhododendron simsii HOM05D006882 ORTHO05D008688 2.2e-15 85.9 114 48.2
DCAR_025431 Daucus carota HOM05D006882 ORTHO05D008688 5.0e-15 84.7 65 63.1
Gorai.006G010400 Gossypium raimondii HOM05D006882 ORTHO05D008688 6.5e-15 84.3 72 61.1
Medtr6g015280 Medicago truncatula HOM05D006882 ORTHO05D008688 1.9e-14 82.8 80 57.5
BraA09t39034Z Brassica rapa HOM05D006882 ORTHO05D008688 2.5e-14 82.4 80 57.5
SalBow1G1386 Salvia bowleyana HOM05D006882 ORTHO05D008688 2.5e-14 82.4 76 60.5
SalBow1G4555 Salvia bowleyana HOM05D006882 ORTHO05D008688 2.5e-14 82.4 76 60.5
Manes.02G055100 Manihot esculenta HOM05D006882 ORTHO05D008688 3.2e-14 82.0 109 48.6
Migut.H00624 Erythranthe guttata HOM05D006882 ORTHO05D008688 4.2e-14 81.6 101 52.5
BcaB07g32783 Brassica carinata HOM05D006882 ORTHO05D008688 5.5e-14 81.3 105 49.5
A09p35030 Brassica napus HOM05D006882 ORTHO05D008688 9.4e-14 80.5 90 52.2
AUR62038673 Chenopodium quinoa HOM05D006882 ORTHO05D008688 9.4e-14 80.5 65 63.1
Medtr6g015260 Medicago truncatula HOM05D006882 ORTHO05D008688 9.4e-14 80.5 95 49.5
MSTRG.2998 Avicennia marina HOM05D006882 ORTHO05D008688 1.2e-13 80.1 91 51.6
Ah.12g062710 Amaranthus hybridus HOM05D006882 ORTHO05D008688 2.7e-13 79.0 84 46.4
Ca_04305_v3 Cicer arietinum L. HOM05D006882 ORTHO05D008688 2.7e-13 79.0 112 48.2
PGSC0003DMG400001358 Solanum tuberosum HOM05D006882 ORTHO05D008688 2.7e-13 79.0 61 68.9
Gohir.A09G009600 Gossypium hirsutum HOM05D006882 ORTHO05D008688 3.6e-13 78.6 72 61.1
BcaC05g27151 Brassica carinata HOM05D006882 ORTHO05D008688 6.1e-13 77.8 81 55.6
C05p30380 Brassica napus HOM05D006882 ORTHO05D008688 6.1e-13 77.8 81 55.6
BolC5t31777H Brassica oleracea HOM05D006882 ORTHO05D008688 6.1e-13 77.8 81 55.6
TWI34G0355 Tripterygium wilfordii HOM05D006882 ORTHO05D008688 6.1e-13 77.8 121 47.1
AUR62018188 Chenopodium quinoa HOM05D006882 ORTHO05D008688 7.9e-13 77.4 65 60.0
Lsat_1_v5_gn_2_90100 Lactuca sativa HOM05D006882 ORTHO05D008688 7.9e-13 77.4 98 55.1
Peaxi162Scf00166g00424 Petunia axillaris HOM05D006882 ORTHO05D008688 7.9e-13 77.4 116 45.7
Hund13139 Selenicereus undatus HOM05D006882 ORTHO05D008688 7.9e-13 77.4 110 46.4
Solyc02g088830.4 Solanum lycopersicum HOM05D006882 ORTHO05D008688 7.9e-13 77.4 65 64.6
Sopen02g033540 Solanum pennellii HOM05D006882 ORTHO05D008688 7.9e-13 77.4 65 64.6
Sed0003732 Sechium edule HOM05D006882 ORTHO05D008688 2.3e-12 75.9 65 60.0
Aqoxy3G00507 Aquilegia oxysepala HOM05D006882 ORTHO05D008688 3.9e-12 75.1 93 48.4
MSTRG.23884 Avicennia marina HOM05D006882 ORTHO05D008688 3.9e-12 75.1 99 47.5
Sc14g0006330 Simmondsia chinensis HOM05D006882 ORTHO05D008688 5.1e-12 74.7 109 43.1
CsaV3_4G009150 Cucumis sativus L. HOM05D006882 ORTHO05D008688 8.8e-12 73.9 65 56.9
Nitab4.5_0003841g0040 Nicotiana tabacum HOM05D006882 ORTHO05D008688 1.5e-11 73.2 113 47.8
HanXRQChr07g0199771 Helianthus annuus HOM05D006882 ORTHO05D008688 3.3e-11 72.0 79 54.4
ClCG07G016320 Citrullus lanatus HOM05D006882 ORTHO05D008688 5.7e-11 71.2 71 56.3
MBI16_g10826_MAGBIO Magnolia biondii HOM05D006882 ORTHO05D008688 1.7e-10 69.7 77 50.6
ECA238G0863 Erigeron canadensis HOM05D006882 ORTHO05D008688 2.8e-10 68.9 79 51.9
Nn1g08730 Nelumbo nucifera HOM05D006882 ORTHO05D008688 6.3e-10 67.8 59 54.2
PSO017G6201 Papaver somniferum HOM05D006882 ORTHO05D008688 1.1e-09 67.0 88 44.3
Peaxi162Scf00254g00028 Petunia axillaris HOM05D006882 ORTHO05D008688 1.4e-09 66.6 54 63.0
Peaxi162Scf00298g00055 Petunia axillaris HOM05D006882 ORTHO05D008688 1.4e-09 66.6 65 58.5
ATR0177G043 Amborella trichopoda HOM05D006882 ORTHO05D008688 3.1e-09 65.5 109 39.4
Peaxi162Scf00329g00037 Petunia axillaris HOM05D006882 ORTHO05D008688 1.2e-08 63.5 70 55.7
Peaxi162Scf00025g00208 Petunia axillaris HOM05D006882 ORTHO05D008688 2.0e-08 62.8 54 61.1
arahy.Tifrunner.gnm1.ann1.K9PA59 Arachis hypogaea HOM05D006882 ORTHO05D008688 1.1e-06 57.0 49 61.2
CsaV3_5G014380 Cucumis sativus L. HOM05D006882 ORTHO05D008688 4.2e-06 55.1 81 43.2


User provided reference genes

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