Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2007 Cannabis sativa HOM05D008206 ORTHO05D010320 1.2e-39 166.0 82 100.0
TAR629G1342 Trochodendron aralioides HOM05D008206 ORTHO05D010320 7.4e-13 77.0 81 51.9
Cpa.g.sc14.94 Carica papaya HOM05D008206 ORTHO05D010320 2.8e-12 75.1 81 50.6
Haze_14514 Corylus avellana HOM05D008206 ORTHO05D010320 4.8e-12 74.3 83 48.2
CiPaw.03G025300 Carya illinoinensis HOM05D008206 ORTHO05D010320 1.8e-11 72.4 83 49.4
Gohir.A10G100200 Gossypium hirsutum HOM05D008206 ORTHO05D010320 5.3e-11 70.9 82 46.3
GSVIVG01011434001 Vitis vinifera HOM05D008206 ORTHO05D010320 5.3e-11 70.9 83 49.4
Cfa007572 Carpinus fangiana HOM05D008206 ORTHO05D010320 9.0e-11 70.1 83 47.0
Prupe.3G266100 Prunus persica HOM05D008206 ORTHO05D010320 2.6e-10 68.6 84 47.6
Gohir.A11G070300 Gossypium hirsutum HOM05D008206 ORTHO05D010320 3.4e-10 68.2 81 50.6
FvH4_6g48260 Fragaria vesca HOM05D008206 ORTHO05D010320 7.6e-10 67.0 87 46.0
FAN05G0177 Fragaria x ananassa HOM05D008206 ORTHO05D010320 7.6e-10 67.0 87 46.0
FAN05G4857 Fragaria x ananassa HOM05D008206 ORTHO05D010320 7.6e-10 67.0 87 46.0
Gohir.D10G088300 Gossypium hirsutum HOM05D008206 ORTHO05D010320 7.6e-10 67.0 80 46.2
FAN02G1369 Fragaria x ananassa HOM05D008206 ORTHO05D010320 1.3e-09 66.2 87 46.0
MD09G1052600 Malus domestica HOM05D008206 ORTHO05D010320 1.3e-09 66.2 83 47.0
FAN09G1639 Fragaria x ananassa HOM05D008206 ORTHO05D010320 2.2e-09 65.5 83 48.2
Gorai.011G097200 Gossypium raimondii HOM05D008206 ORTHO05D010320 2.2e-09 65.5 81 46.9
MD00G1125200 Malus domestica HOM05D008206 ORTHO05D010320 2.2e-09 65.5 84 46.4
Ciclev10013233m.g Citrus clementina HOM05D008206 ORTHO05D010320 2.9e-09 65.1 84 47.6
RcHm_v2.0_Chr2g0167761 Rosa chinensis HOM05D008206 ORTHO05D010320 2.9e-09 65.1 85 44.7
FAN14G5696 Fragaria x ananassa HOM05D008206 ORTHO05D010320 3.8e-09 64.7 87 44.8
ClCG10G015200 Citrullus lanatus HOM05D008206 ORTHO05D010320 5.0e-09 64.3 88 47.7
Manes.02G047166 Manihot esculenta HOM05D008206 ORTHO05D010320 5.0e-09 64.3 82 42.7
Thecc.04G083900 Theobroma cacao HOM05D008206 ORTHO05D010320 5.0e-09 64.3 82 47.6
Sed0002436 Sechium edule HOM05D008206 ORTHO05D010320 8.4e-09 63.5 75 49.3
CiPaw.04G016300 Carya illinoinensis HOM05D008206 ORTHO05D010320 1.4e-08 62.8 82 46.3
Gohir.D11G074000 Gossypium hirsutum HOM05D008206 ORTHO05D010320 1.4e-08 62.8 82 46.3
Gorai.007G079400 Gossypium raimondii HOM05D008206 ORTHO05D010320 1.4e-08 62.8 82 46.3
Nn3g17269 Nelumbo nucifera HOM05D008206 ORTHO05D010320 2.5e-08 62.0 82 43.9
Thecc.04G084200 Theobroma cacao HOM05D008206 ORTHO05D010320 2.5e-08 62.0 82 46.3
CsaV3_3G041320 Cucumis sativus L. HOM05D008206 ORTHO05D010320 3.2e-08 61.6 91 45.1
TPR.G28906 Trifolium pratense HOM05D008206 ORTHO05D010320 5.5e-08 60.8 79 41.8
Gohir.D12G128666 Gossypium hirsutum HOM05D008206 ORTHO05D010320 2.1e-07 58.9 81 43.2
Gorai.008G139600 Gossypium raimondii HOM05D008206 ORTHO05D010320 2.1e-07 58.9 83 44.6
MELO3C009860.2 Cucumis melo HOM05D008206 ORTHO05D010320 6.1e-07 57.4 94 43.6
Aqoxy3G03425 Aquilegia oxysepala HOM05D008206 ORTHO05D010320 7.9e-07 57.0 84 45.2
Nn4g23199 Nelumbo nucifera HOM05D008206 ORTHO05D010320 7.9e-07 57.0 83 43.4
Dinv33772 Davidia involucrata HOM05D008206 ORTHO05D010320 1.0e-06 56.6 77 40.3
A03p07070 Brassica napus HOM05D011054 ORTHO05D013197 1.8e-06 55.8 81 46.9
C03p08050 Brassica napus HOM05D011054 ORTHO05D013197 1.8e-06 55.8 81 46.9
BolC3t13303H Brassica oleracea HOM05D011054 ORTHO05D013197 1.8e-06 55.8 81 46.9
BraA03t10029Z Brassica rapa HOM05D011054 ORTHO05D013197 1.8e-06 55.8 81 46.9
Medtr7g010980 Medicago truncatula HOM05D008206 ORTHO05D010320 3.0e-06 55.1 81 40.7
Thhalv10015159m.g Eutrema salsugineum HOM05D011054 ORTHO05D013197 3.9e-06 54.7 81 45.7
Gohir.D11G074200 Gossypium hirsutum HOM05D008206 ORTHO05D010320 3.9e-06 54.7 77 44.2
Psat3g197800 Pisum sativum HOM05D008206 ORTHO05D010320 3.9e-06 54.7 80 41.2
Sp6g28810 Schrenkiella parvula HOM05D011054 ORTHO05D013197 3.9e-06 54.7 86 43.0
THA.LOC104822354 Tarenaya hassleriana HOM05D011054 ORTHO05D013197 5.1e-06 54.3 85 43.5


User provided reference genes

Program Settings