Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1998 Cannabis sativa HOM05D004326 ORTHO05D004570 1.2e-18 95.5 48 100.0
Atru.chr11.1355 Acer truncatum HOM05D004326 ORTHO05D004570 1.1e-16 89.0 48 89.6
Gorai.008G186200 Gossypium raimondii HOM05D004326 ORTHO05D004570 1.1e-16 89.0 48 91.7
Gohir.A12G170400 Gossypium hirsutum HOM05D004326 ORTHO05D004570 1.4e-16 88.6 48 89.6
Gohir.D12G173600 Gossypium hirsutum HOM05D004326 ORTHO05D004570 2.4e-16 87.8 48 89.6
Glyma.20G185900 Glycine max HOM05D004326 ORTHO05D004570 3.5e-15 84.0 48 91.7
CiPaw.15G003600 Carya illinoinensis HOM05D004326 ORTHO05D004570 4.6e-15 83.6 48 89.6
Thecc.02G361000 Theobroma cacao HOM05D004326 ORTHO05D004570 4.6e-15 83.6 48 91.7
Duzib268G0802 Durio zibethinus HOM05D004326 ORTHO05D004570 6.0e-15 83.2 44 93.2
Phvul.007G102250 Phaseolus vulgaris HOM05D004326 ORTHO05D004570 6.0e-15 83.2 44 93.2
TWI79G1601 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 6.0e-15 83.2 49 87.8
Duzib251G0285 Durio zibethinus HOM05D004326 ORTHO05D004570 7.9e-15 82.8 48 89.6
Manes.14G097600 Manihot esculenta HOM05D004326 ORTHO05D004570 7.9e-15 82.8 48 89.6
Glyma.10G204600 Glycine max HOM05D004326 ORTHO05D004570 1.0e-14 82.4 48 89.6
CARHR013620 Cardamine hirsuta HOM05D004326 ORTHO05D004570 1.3e-14 82.0 48 83.3
Lalb_Chr17g0341881 Lupinus albus HOM05D004326 ORTHO05D004570 1.3e-14 82.0 50 82.0
TWI31G0110 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 1.3e-14 82.0 50 84.0
PGR102G0365 Punica granatum HOM05D004326 ORTHO05D004570 3.0e-14 80.9 49 85.7
Carub.0001s1297 Capsella rubella HOM05D004326 ORTHO05D004570 5.1e-14 80.1 48 81.2
Lalb_Chr10g0099751 Lupinus albus HOM05D004326 ORTHO05D004570 5.1e-14 80.1 50 84.0
Prupe.1G305400 Prunus persica HOM05D004326 ORTHO05D004570 5.1e-14 80.1 49 83.7
THA.LOC104805244 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 5.1e-14 80.1 48 85.4
THA.LOC104825713 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 5.1e-14 80.1 48 85.4
Gohir.D13G069701 Gossypium hirsutum HOM05D004326 ORTHO05D004570 6.7e-14 79.7 48 85.4
PGR119G2456 Punica granatum HOM05D004326 ORTHO05D004570 6.7e-14 79.7 48 87.5
Eucgr.G02348 Eucalyptus grandis HOM05D004326 ORTHO05D004570 8.7e-14 79.3 48 81.2
Gohir.A13G053100 Gossypium hirsutum HOM05D004326 ORTHO05D004570 8.7e-14 79.3 48 85.4
MD13G1046500 Malus domestica HOM05D004326 ORTHO05D004570 8.7e-14 79.3 51 82.4
MD16G1048200 Malus domestica HOM05D004326 ORTHO05D004570 8.7e-14 79.3 51 82.4
Oeu058414.1 Olea europaea HOM05D004326 ORTHO05D004570 8.7e-14 79.3 48 77.1
Manes.06G072200 Manihot esculenta HOM05D004326 ORTHO05D004570 1.5e-13 78.6 51 80.4
A06p08510 Brassica napus HOM05D004326 ORTHO05D004570 1.9e-13 78.2 48 79.2
C05p10110 Brassica napus HOM05D004326 ORTHO05D004570 1.9e-13 78.2 48 79.2
PSO063G2411 Papaver somniferum HOM05D004326 ORTHO05D004570 2.5e-13 77.8 48 81.2
PSO782G5714 Papaver somniferum HOM05D004326 ORTHO05D004570 2.5e-13 77.8 48 81.2
Glyma.10G129200 Glycine max HOM05D004326 ORTHO05D004570 5.6e-13 76.6 48 85.4
Lalb_Chr02g0151761 Lupinus albus HOM05D004326 ORTHO05D004570 5.6e-13 76.6 47 76.6
Potri.008G116700 Populus trichocarpa HOM05D004326 ORTHO05D004570 5.6e-13 76.6 48 81.2
Potri.010G129600 Populus trichocarpa HOM05D004326 ORTHO05D004570 9.6e-13 75.9 44 81.8
A08p32390 Brassica napus HOM05D004326 ORTHO05D004570 1.3e-12 75.5 46 80.4
CAN.G184.91 Capsicum annuum HOM05D004326 ORTHO05D004570 1.6e-12 75.1 43 81.4
AL1G24940 Arabidopsis lyrata HOM05D004326 ORTHO05D004570 4.8e-12 73.6 40 85.0
AT1G13245 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 4.8e-12 73.6 40 85.0
C08p16040 Brassica napus HOM05D004326 ORTHO05D004570 6.2e-12 73.2 46 78.3
MELO3C008521.2 Cucumis melo HOM05D004326 ORTHO05D004570 1.1e-11 72.4 51 74.5
Glyma.01G088000 Glycine max HOM05D004326 ORTHO05D004570 1.1e-11 72.4 48 72.9
Glyma.02G100100 Glycine max HOM05D004326 ORTHO05D004570 1.1e-11 72.4 48 72.9
BolC5t29757H Brassica oleracea HOM05D004326 ORTHO05D004570 1.4e-11 72.0 40 85.0
BraA06t24046Z Brassica rapa HOM05D004326 ORTHO05D004570 1.4e-11 72.0 40 85.0
BraA08t35162Z Brassica rapa HOM05D004326 ORTHO05D004570 1.4e-11 72.0 40 85.0
Carub.0002s1541 Capsella rubella HOM05D004326 ORTHO05D004570 1.4e-11 72.0 48 72.9
Lalb_Chr06g0170221 Lupinus albus HOM05D004326 ORTHO05D004570 1.4e-11 72.0 43 76.7
BolC8t49226H Brassica oleracea HOM05D004326 ORTHO05D004570 2.4e-11 71.2 40 85.0
Potri.004G102950 Populus trichocarpa HOM05D004326 ORTHO05D004570 2.4e-11 71.2 48 72.9
Potri.017G112100 Populus trichocarpa HOM05D004326 ORTHO05D004570 2.4e-11 71.2 48 70.8
THA.LOC109116167 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 2.4e-11 71.2 48 72.9
AL2G27790 Arabidopsis lyrata HOM05D004326 ORTHO05D004570 3.1e-11 70.9 45 68.9
AT1G68825 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 3.1e-11 70.9 45 68.9
C06p37300 Brassica napus HOM05D004326 ORTHO05D004570 3.1e-11 70.9 45 68.9
THA.LOC109117025 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 6.9e-11 69.7 48 68.8
Duzib138G0964 Durio zibethinus HOM05D004326 ORTHO05D004570 2.6e-10 67.8 50 70.0
PSO478G3685 Papaver somniferum HOM05D004326 ORTHO05D004570 2.6e-10 67.8 49 73.5
Glyma.12G187300 Glycine max HOM05D004326 ORTHO05D004570 3.4e-10 67.4 43 86.0
ClCG03G009910 Citrullus lanatus HOM05D004326 ORTHO05D004570 4.5e-10 67.0 50 72.0
Thecc.04G138400 Theobroma cacao HOM05D004326 ORTHO05D004570 4.5e-10 67.0 49 69.4
PSO017G5195 Papaver somniferum HOM05D004326 ORTHO05D004570 7.6e-10 66.2 48 70.8
Gohir.A07G168701 Gossypium hirsutum HOM05D004326 ORTHO05D004570 1.0e-09 65.9 45 68.9
Gohir.D07G179500 Gossypium hirsutum HOM05D004326 ORTHO05D004570 1.0e-09 65.9 45 68.9
Gorai.001G200500 Gossypium raimondii HOM05D004326 ORTHO05D004570 1.0e-09 65.9 45 68.9
Manes.01G107900 Manihot esculenta HOM05D004326 ORTHO05D004570 1.0e-09 65.9 50 70.0
Manes.02G066501 Manihot esculenta HOM05D004326 ORTHO05D004570 1.0e-09 65.9 48 68.8
CiPaw.03G059200 Carya illinoinensis HOM05D004326 ORTHO05D004570 1.3e-09 65.5 43 74.4
TWI12G0968 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 1.7e-09 65.1 48 70.8
A06p42560 Brassica napus HOM05D004326 ORTHO05D004570 2.2e-09 64.7 41 82.9
BraA06t27171Z Brassica rapa HOM05D004326 ORTHO05D004570 2.2e-09 64.7 41 82.9
Migut.K01265 Erythranthe guttata HOM05D004326 ORTHO05D004570 2.2e-09 64.7 49 73.5
Phvul.008G020301 Phaseolus vulgaris HOM05D004326 ORTHO05D004570 2.2e-09 64.7 44 70.5
CiPaw.15G127400 Carya illinoinensis HOM05D004326 ORTHO05D004570 2.9e-09 64.3 48 64.6
Medtr1g093650 Medicago truncatula HOM05D004326 ORTHO05D004570 3.8e-09 63.9 50 74.0
AT3G25717 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 4.9e-09 63.5 41 80.5
A09p24960 Brassica napus HOM05D004326 ORTHO05D004570 4.9e-09 63.5 41 80.5
BraA09t38084Z Brassica rapa HOM05D004326 ORTHO05D004570 4.9e-09 63.5 41 80.5
Carub.0005s0354 Capsella rubella HOM05D004326 ORTHO05D004570 4.9e-09 63.5 41 80.5
Glyma.08G256500 Glycine max HOM05D004326 ORTHO05D004570 4.9e-09 63.5 38 76.3
Glyma.18G280800 Glycine max HOM05D004326 ORTHO05D004570 4.9e-09 63.5 44 70.5
TWI56G0546 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 4.9e-09 63.5 44 70.5
Migut.K00857 Erythranthe guttata HOM05D004326 ORTHO05D004570 6.5e-09 63.2 40 77.5
Duzib068G0156 Durio zibethinus HOM05D004326 ORTHO05D004570 8.4e-09 62.8 48 68.8
Migut.L01097 Erythranthe guttata HOM05D004326 ORTHO05D004570 8.4e-09 62.8 48 64.6
Duzib084G0446 Durio zibethinus HOM05D004326 ORTHO05D004570 1.9e-08 61.6 51 70.6
CANSAT64G0444 Cannabis sativa HOM05D004326 ORTHO05D004570 3.2e-08 60.8 51 64.7
Migut.H00527 Erythranthe guttata HOM05D004326 ORTHO05D004570 3.2e-08 60.8 39 71.8
CAN.G93.32 Capsicum annuum HOM05D004326 ORTHO05D004570 4.2e-08 60.5 48 62.5
Solyc02g065570.1 Solanum lycopersicum HOM05D004326 ORTHO05D004570 4.2e-08 60.5 37 75.7
PGSC0003DMG400007475 Solanum tuberosum HOM05D004326 ORTHO05D004570 4.2e-08 60.5 33 84.8
Gohir.A09G046900 Gossypium hirsutum HOM05D004326 ORTHO05D004570 5.5e-08 60.1 50 66.0
Gohir.D09G047400 Gossypium hirsutum HOM05D004326 ORTHO05D004570 5.5e-08 60.1 50 66.0
Gorai.006G062700 Gossypium raimondii HOM05D004326 ORTHO05D004570 5.5e-08 60.1 50 66.0
BolC7t43991H Brassica oleracea HOM05D004326 ORTHO05D004570 7.1e-08 59.7 41 78.0
FvH4_6g45391 Fragaria vesca HOM05D004326 ORTHO05D004570 7.1e-08 59.7 36 75.0
FAN14G2544 Fragaria x ananassa HOM05D004326 ORTHO05D004570 7.1e-08 59.7 36 75.0
FAN14G3188 Fragaria x ananassa HOM05D004326 ORTHO05D004570 7.1e-08 59.7 36 75.0
Prupe.5G217900 Prunus persica HOM05D004326 ORTHO05D004570 9.3e-08 59.3 49 65.3
RcHm_v2.0_Chr2g0163211 Rosa chinensis HOM05D004326 ORTHO05D004570 1.2e-07 58.9 48 58.3
THA.LOC109117071 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 1.2e-07 58.9 36 75.0
Duzib084G0016 Durio zibethinus HOM05D004326 ORTHO05D004570 1.6e-07 58.5 51 68.6
Prupe.3G240100 Prunus persica HOM05D004326 ORTHO05D004570 1.6e-07 58.5 52 63.5
Lalb_Chr17g0336511 Lupinus albus HOM05D004326 ORTHO05D004570 2.1e-07 58.2 37 70.3
PSO063G2252 Papaver somniferum HOM05D004326 ORTHO05D004570 2.7e-07 57.8 34 82.4
PGR042G3431 Punica granatum HOM05D004326 ORTHO05D004570 2.7e-07 57.8 48 64.6
CAN.G497.3 Capsicum annuum HOM05D004326 ORTHO05D004570 3.5e-07 57.4 37 73.0
Glyma.14G153200 Glycine max HOM05D004326 ORTHO05D004570 3.5e-07 57.4 37 86.5
MD09G1083800 Malus domestica HOM05D004326 ORTHO05D004570 3.5e-07 57.4 51 54.9
Gohir.A11G006950 Gossypium hirsutum HOM05D004326 ORTHO05D004570 4.6e-07 57.0 43 60.5
Gohir.D11G006050 Gossypium hirsutum HOM05D004326 ORTHO05D004570 4.6e-07 57.0 43 60.5
Gorai.007G007300 Gossypium raimondii HOM05D004326 ORTHO05D004570 4.6e-07 57.0 43 60.5
Glyma.02G099000 Glycine max HOM05D004326 ORTHO05D004570 6.0e-07 56.6 36 72.2
Manes.01G020350 Manihot esculenta HOM05D004326 ORTHO05D004570 6.0e-07 56.6 49 65.3
Rhsim09G0112000 Rhododendron simsii HOM05D004326 ORTHO05D004570 6.0e-07 56.6 37 73.0
Carub.0002s1354 Capsella rubella HOM05D004326 ORTHO05D004570 7.9e-07 56.2 39 66.7
PGR083G2212 Punica granatum HOM05D004326 ORTHO05D004570 1.0e-06 55.8 49 61.2
COL.COLO4_07868 Corchorus olitorius HOM05D004326 ORTHO05D004570 1.3e-06 55.5 41 80.5
AT1G67265 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 1.8e-06 55.1 39 64.1
Thhalv10015386m.g Eutrema salsugineum HOM05D004326 ORTHO05D004570 1.8e-06 55.1 36 69.4
Carub.0006s1421 Capsella rubella HOM05D004326 ORTHO05D004570 2.3e-06 54.7 47 55.3
A10p23030 Brassica napus HOM05D004326 ORTHO05D004570 3.0e-06 54.3 47 55.3
BolC9t58947H Brassica oleracea HOM05D004326 ORTHO05D004570 3.0e-06 54.3 47 55.3
BraA10t44372Z Brassica rapa HOM05D004326 ORTHO05D004570 3.0e-06 54.3 47 55.3
Manes.05G139100 Manihot esculenta HOM05D004326 ORTHO05D004570 3.9e-06 53.9 44 63.6
C06p43000 Brassica napus HOM05D004326 ORTHO05D004570 6.7e-06 53.1 31 77.4
BolC6t39135H Brassica oleracea HOM05D004326 ORTHO05D004570 6.7e-06 53.1 31 77.4
BraA07t31013Z Brassica rapa HOM05D004326 ORTHO05D004570 6.7e-06 53.1 36 69.4
Zm00001eb294730 Zea mays HOM05D047758 ORTHO05D004570 8.7e-06 52.8 28 85.7


User provided reference genes

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