Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1925 Cannabis sativa HOM05D005563 ORTHO05D006667 5.2e-240 833.9 410 100.0
Prupe.8G002700 Prunus persica HOM05D005563 ORTHO05D006667 3.3e-154 548.9 411 67.6
Dinv22054 Davidia involucrata HOM05D005563 ORTHO05D006667 7.6e-151 537.7 408 65.2
RcHm_v2.0_Chr6g0249561 Rosa chinensis HOM05D005563 ORTHO05D006667 1.7e-150 536.6 410 66.8
QL09p001227 Quercus lobata HOM05D005563 ORTHO05D006667 1.1e-146 523.9 410 63.4
FvH4_2g00270 Fragaria vesca HOM05D005563 ORTHO05D006667 7.4e-146 521.2 409 65.3
GSVIVG01037139001 Vitis vinifera HOM05D005563 ORTHO05D006667 1.4e-144 516.9 407 63.9
Ciclev10020232m.g Citrus clementina HOM05D005563 ORTHO05D006667 1.7e-142 510.0 410 61.7
Cfa007306 Carpinus fangiana HOM05D005563 ORTHO05D006667 6.5e-142 508.1 410 62.4
FAN24G3564 Fragaria x ananassa HOM05D005563 ORTHO05D006667 6.5e-142 508.1 428 62.1
CiPaw.04G008700 Carya illinoinensis HOM05D005563 ORTHO05D006667 8.5e-142 507.7 410 63.4
Potri.013G094800 Populus trichocarpa HOM05D005563 ORTHO05D006667 1.4e-141 506.9 414 63.0
CSS0040007 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 5.5e-141 505.0 408 62.5
CSS0002080 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 2.7e-140 502.7 408 62.0
TAR628G0232 Trochodendron aralioides HOM05D005563 ORTHO05D006667 6.7e-139 498.0 411 61.8
Actinidia29363 Actinidia chinensis HOM05D005563 ORTHO05D006667 8.8e-139 497.7 407 62.4
MD10G1001500 Malus domestica HOM05D005563 ORTHO05D006667 2.0e-138 496.5 409 65.3
Sabra13G0080900 Salix brachista HOM05D005563 ORTHO05D006667 1.9e-133 479.9 413 61.0
Atru.chr13.2584 Acer truncatum HOM05D005563 ORTHO05D006667 2.5e-133 479.6 411 59.9
Glyma.13G312100 Glycine max HOM05D005563 ORTHO05D006667 1.2e-132 477.2 412 61.4
VMungo1080G1448 Vigna mungo HOM05D005563 ORTHO05D006667 2.1e-132 476.5 407 61.7
arahy.Tifrunner.gnm1.ann1.QV839S Arachis hypogaea HOM05D005563 ORTHO05D006667 6.1e-132 474.9 409 59.7
Lalb_Chr24g0393341 Lupinus albus HOM05D005563 ORTHO05D006667 6.1e-132 474.9 405 59.5
Thecc.05G149300 Theobroma cacao HOM05D005563 ORTHO05D006667 7.9e-132 474.6 409 59.9
Lj3g0011209 Lotus japonicus HOM05D005563 ORTHO05D006667 1.8e-131 473.4 406 61.3
vmacro07741 Vaccinium macrocarpon HOM05D005563 ORTHO05D006667 1.8e-131 473.4 407 60.4
Haze_14007 Corylus avellana HOM05D005563 ORTHO05D006667 3.0e-131 472.6 518 50.4
Phvul.005G118600 Phaseolus vulgaris HOM05D005563 ORTHO05D006667 2.0e-130 469.9 407 60.9
Cc02_g22680 Coffea canephora HOM05D005563 ORTHO05D006667 3.3e-130 469.2 408 60.5
Oeu019017.1 Olea europaea HOM05D005563 ORTHO05D006667 3.3e-130 469.2 408 58.6
Aqoxy1G00244 Aquilegia oxysepala HOM05D005563 ORTHO05D006667 5.7e-130 468.4 407 57.7
PGR044G0823 Punica granatum HOM05D005563 ORTHO05D006667 5.7e-130 468.4 407 58.7
Oeu009445.1 Olea europaea HOM05D005563 ORTHO05D006667 3.7e-129 465.7 407 58.7
Rhsim01G0059200 Rhododendron simsii HOM05D005563 ORTHO05D006667 1.4e-128 463.8 417 59.5
ClCG11G000440 Citrullus lanatus HOM05D005563 ORTHO05D006667 4.1e-128 462.2 412 59.7
Rhsim01G0058900 Rhododendron simsii HOM05D005563 ORTHO05D006667 4.1e-128 462.2 408 58.8
Medtr8g103020 Medicago truncatula HOM05D005563 ORTHO05D006667 1.5e-127 460.3 419 58.2
Duzib177G0343 Durio zibethinus HOM05D005563 ORTHO05D006667 2.6e-127 459.5 407 58.0
Nn5g27214 Nelumbo nucifera HOM05D005563 ORTHO05D006667 3.5e-127 459.1 408 59.1
TPR.G23443 Trifolium pratense HOM05D005563 ORTHO05D006667 9.4e-125 451.1 423 56.5
Nitab4.5_0006591g0020 Nicotiana tabacum HOM05D005563 ORTHO05D006667 1.0e-123 447.6 404 58.4
Gorai.009G262600 Gossypium raimondii HOM05D005563 ORTHO05D006667 2.3e-123 446.4 410 56.6
CsaV3_6G042510 Cucumis sativus L. HOM05D005563 ORTHO05D006667 3.9e-123 445.7 412 57.8
Psat7g014680 Pisum sativum HOM05D005563 ORTHO05D006667 2.0e-122 443.4 432 53.9
DCAR_001180 Daucus carota HOM05D005563 ORTHO05D006667 2.6e-122 443.0 410 58.0
DCAR_010113 Daucus carota HOM05D005563 ORTHO05D006667 4.4e-122 442.2 410 58.5
DCAR_027509 Daucus carota HOM05D005563 ORTHO05D006667 7.4e-122 441.4 409 58.7
Migut.G00338 Erythranthe guttata HOM05D005563 ORTHO05D006667 2.2e-121 439.9 413 55.4
CAN.G587.23 Capsicum annuum HOM05D005563 ORTHO05D006667 4.1e-120 435.6 408 57.6
Aa31LG4G9220 Aethionema arabicum HOM05D005563 ORTHO05D006667 6.5e-118 428.3 415 55.2
CAN.G769.9 Capsicum annuum HOM05D005563 ORTHO05D006667 1.9e-117 426.8 408 57.1
PSO761G0451 Papaver somniferum HOM05D005563 ORTHO05D006667 1.9e-117 426.8 420 54.0
Solyc03g026100.1 Solanum lycopersicum HOM05D005563 ORTHO05D006667 1.9e-117 426.8 405 56.5
PGSC0003DMG400014277 Solanum tuberosum HOM05D005563 ORTHO05D006667 1.2e-116 424.1 404 56.4
Hund26934 Selenicereus undatus HOM05D005563 ORTHO05D006667 3.6e-116 422.5 406 55.7
ECA232G0495 Erigeron canadensis HOM05D004116 ORTHO05D004734 1.8e-115 420.2 399 54.6
Sopen03g004940 Solanum pennellii HOM05D005563 ORTHO05D006667 1.8e-115 420.2 407 55.8
THA.LOC104825030 Tarenaya hassleriana HOM05D005563 ORTHO05D006667 5.2e-115 418.7 417 54.0
Eucgr.G00337 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.2e-114 417.5 408 57.1
MBI14_g08074_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 2.6e-114 416.4 384 58.3
A07p30780 Brassica napus HOM05D005563 ORTHO05D006667 4.4e-114 415.6 408 54.7
Sp5g26490 Schrenkiella parvula HOM05D005563 ORTHO05D006667 2.8e-113 412.9 417 53.2
SGA_v2.0_scaffold277G46672 Striga asiatica HOM05D005563 ORTHO05D006667 2.8e-113 412.9 409 52.8
TAR633G2728 Trochodendron aralioides HOM05D005563 ORTHO05D006667 3.7e-113 412.5 350 60.3
BcaB03g14889 Brassica carinata HOM05D005563 ORTHO05D006667 4.8e-113 412.1 415 53.0
BraA07t30715Z Brassica rapa HOM05D005563 ORTHO05D006667 2.4e-112 409.8 415 54.9
PSO170G2533 Papaver somniferum HOM05D005563 ORTHO05D006667 1.2e-111 407.5 413 53.0
AT5G24670 Arabidopsis thaliana HOM05D005563 ORTHO05D006667 4.5e-111 405.6 413 52.3
C06p35680 Brassica napus HOM05D005563 ORTHO05D006667 4.5e-111 405.6 419 53.7
BcaC08g45784 Brassica carinata HOM05D005563 ORTHO05D006667 5.9e-111 405.2 411 53.8
CARHR064610 Cardamine hirsuta HOM05D005563 ORTHO05D006667 7.7e-111 404.8 417 52.0
Thhalv10018623m.g Eutrema salsugineum HOM05D005563 ORTHO05D006667 7.7e-111 404.8 409 53.1
AL1G12770 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 3.8e-110 402.5 418 52.4
AL2G30920 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 5.0e-110 402.1 413 52.8
BolC6t38691H Brassica oleracea HOM05D005563 ORTHO05D006667 6.5e-110 401.7 423 53.2
arahy.Tifrunner.gnm1.ann1.NB4SND Arachis hypogaea HOM05D005563 ORTHO05D006667 1.5e-109 400.6 430 52.8
Manes.18G108800 Manihot esculenta HOM05D005563 ORTHO05D006667 1.5e-109 400.6 346 60.1
Carub.0002s1819 Capsella rubella HOM05D005563 ORTHO05D006667 4.2e-109 399.1 413 52.1
BcaB03g15600 Brassica carinata HOM05D005563 ORTHO05D006667 5.5e-109 398.7 411 53.3
TWI18G0160 Tripterygium wilfordii HOM05D005563 ORTHO05D006667 2.1e-108 396.7 413 52.3
PSO407G0243 Papaver somniferum HOM05D005563 ORTHO05D006667 2.0e-106 390.2 415 51.3
Carub.0004s0662 Capsella rubella HOM05D005563 ORTHO05D006667 7.5e-106 388.3 406 52.0
Nitab4.5_0001489g0080 Nicotiana tabacum HOM05D005563 ORTHO05D006667 1.7e-105 387.1 362 57.7
Sed0012109 Sechium edule HOM05D005563 ORTHO05D006667 6.3e-105 385.2 337 61.1
PSO017G5640 Papaver somniferum HOM05D005563 ORTHO05D006667 8.3e-105 384.8 418 49.5
Lsat_1_v5_gn_4_170241 Lactuca sativa HOM05D005563 ORTHO05D006667 2.7e-103 379.8 404 52.2
Nitab4.5_0000079g0140 Nicotiana tabacum HOM05D005563 ORTHO05D006667 5.0e-102 375.6 398 53.3
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 4.9e-97 359.0 383 50.7
AUR62023340 Chenopodium quinoa HOM05D005563 ORTHO05D006667 8.3e-97 358.2 417 48.9
MELO3C022956.2 Cucumis melo HOM05D005563 ORTHO05D006667 8.3e-97 358.2 358 55.0
Peaxi162Scf00078g01133 Petunia axillaris HOM05D005563 ORTHO05D006667 4.1e-96 355.9 347 56.8
ATR0580G344 Amborella trichopoda HOM05D005563 ORTHO05D006667 1.6e-95 354.0 424 45.8
FAN19G1429 Fragaria x ananassa HOM05D005563 ORTHO05D006667 9.5e-93 344.7 435 49.2
HanXRQChr15g0488461 Helianthus annuus HOM05D005563 ORTHO05D006667 1.6e-92 344.0 343 54.2
AUR62013814 Chenopodium quinoa HOM05D005563 ORTHO05D006667 4.0e-91 339.3 498 41.6
TPR.G11352 Trifolium pratense HOM05D005563 ORTHO05D006667 1.2e-84 317.8 311 54.3
Gohir.A05G248000 Gossypium hirsutum HOM05D005563 ORTHO05D006667 8.1e-84 315.1 313 54.0
Gohir.D05G248801 Gossypium hirsutum HOM05D005563 ORTHO05D006667 4.4e-82 309.3 317 52.1
BcaB03g14888 Brassica carinata HOM05D005563 ORTHO05D006667 8.6e-78 295.0 373 46.6
Eucgr.C03620 Eucalyptus grandis HOM05D005563 ORTHO05D006667 8.1e-76 288.5 286 55.2
AUR62037990 Chenopodium quinoa HOM05D005563 ORTHO05D006667 3.1e-75 286.6 312 47.8
EL10Ac1g00691 Beta vulgaris HOM05D005563 ORTHO05D006667 7.8e-71 271.9 361 45.4
Sc19g0006900 Simmondsia chinensis HOM05D005563 ORTHO05D006667 8.9e-67 258.5 308 49.0
Ca_17321_v3 Cicer arietinum L. HOM05D005563 ORTHO05D006667 8.4e-65 251.9 322 47.5
COL.COLO4_34067 Corchorus olitorius HOM05D005563 ORTHO05D006667 4.2e-64 249.6 311 49.5
Cpa.g.sc249.8 Carica papaya HOM05D005563 ORTHO05D006667 7.3e-61 238.8 168 71.4
CDE04G2046 Ceratophyllum demersum HOM05D005563 ORTHO05D006667 1.3e-60 238.0 265 50.9
Mapoly0019s0003 Marchantia polymorpha HOM05D005563 ORTHO05D006667 2.0e-58 230.7 437 36.2
Pp3c5_5220 Physcomitrium patens HOM05D005563 ORTHO05D006667 7.6e-58 228.8 396 38.6
SMO356G0078 Selaginella moellendorffii HOM05D005563 ORTHO05D006667 1.9e-56 224.2 407 35.1
AagrBONN_evm.TU.Sc2ySwM_344.1216 Anthoceros agrestis HOM05D005563 ORTHO05D006667 1.7e-54 217.6 466 33.7
BolC6t39597H Brassica oleracea HOM05D005563 ORTHO05D006667 6.6e-54 215.7 373 39.1
Zm00001eb088860 Zea mays HOM05D005563 ORTHO05D006667 2.1e-52 210.7 267 47.6
SHI17431 Sapria himalayana HOM05D005563 ORTHO05D006667 1.4e-51 208.0 276 43.5
HPP92_009712 Vanilla planifolia HOM05D005563 ORTHO05D006667 7.6e-50 202.2 254 46.1
Eucgr.C03478 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.9e-40 171.0 238 45.0
MCO11G544 Micromonas commoda HOM05D005563 ORTHO05D006667 9.0e-35 152.1 365 30.1
MBI14_g20078_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 1.2e-34 151.8 79 84.8
MBI13_g08747_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 2.6e-34 150.6 88 75.0
MBI08_g10505_MAGBIO Magnolia biondii HOM05D000152 ORTHO05D006667 4.5e-34 149.8 87 75.9
TPR.G11340 Trifolium pratense HOM05D005563 ORTHO05D006667 5.0e-33 146.4 74 86.5
MBI15_g36474_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 6.5e-33 146.0 91 70.3
Eucgr.C03640 Eucalyptus grandis HOM05D005563 ORTHO05D006667 3.9e-30 136.7 74 82.4
CBR_g50242 Chara braunii HOM05D005563 ORTHO05D006667 1.1e-29 135.2 587 24.5
Actinidia03534 Actinidia chinensis HOM05D005563 ORTHO05D006667 8.2e-28 129.0 92 66.3
Eucgr.L00998 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.4e-27 128.3 197 44.7
DCAR_001179 Daucus carota HOM05D005563 ORTHO05D006667 1.4e-24 118.2 169 44.4
C06p46160 Brassica napus HOM05D005563 ORTHO05D006667 2.1e-23 114.4 193 42.0
Thecc.10G189600 Theobroma cacao HOM05D005563 ORTHO05D006667 6.1e-23 112.8 112 55.4
FAN20G2324 Fragaria x ananassa HOM05D005563 ORTHO05D006667 1.0e-22 112.1 54 94.4
CBR_g8323 Chara braunii HOM05D005563 ORTHO05D006667 3.9e-22 110.2 618 22.8
Cre10.g439200 Chlamydomonas reinhardtii HOM05D005563 ORTHO05D006667 5.3e-19 99.8 447 25.3
Eucgr.C03636 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.3e-17 95.1 179 38.5
Thecc.10G189700 Theobroma cacao HOM05D005563 ORTHO05D006667 1.6e-15 88.2 115 43.5
Haze_14787 Corylus avellana HOM05D005563 ORTHO05D006667 7.4e-13 79.3 235 31.5
PRCOL_00003298 Prasinoderma coloniale HOM05D005563 ORTHO05D006667 1.7e-12 78.2 148 32.4
SHI17433 Sapria himalayana HOM05D005563 ORTHO05D006667 1.9e-08 64.7 60 46.7
Actinidia28221 Actinidia chinensis HOM05D005563 ORTHO05D006667 8.8e-06 55.8 52 57.7


User provided reference genes

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