Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 5.2e-218 760.8 387 100.0
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.0e-141 505.8 337 75.1
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.6e-140 502.7 337 75.1
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.6e-140 502.7 337 75.1
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 5.7e-140 501.5 337 75.4
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 2.2e-139 499.6 336 74.7
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 5.4e-138 495.0 340 75.6
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 5.4e-138 495.0 340 75.6
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 5.4e-138 495.0 344 74.1
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 9.1e-138 494.2 337 74.2
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 1.6e-137 493.4 339 74.9
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 4.2e-135 485.3 335 74.3
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 1.6e-134 483.4 328 74.7
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 1.6e-134 483.4 328 75.3
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 6.8e-133 478.0 331 73.1
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 8.9e-133 477.6 326 74.8
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 1.5e-132 476.9 338 71.9
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 7.5e-132 474.6 328 73.8
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 1.3e-131 473.8 330 72.4
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 1.3e-131 473.8 326 74.2
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 2.2e-131 473.0 331 72.2
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 2.8e-131 472.6 326 74.2
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 4.9e-131 471.9 327 73.1
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 4.9e-131 471.9 328 73.8
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 8.3e-131 471.1 333 72.4
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 8.3e-131 471.1 331 73.7
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 1.8e-130 469.9 339 71.1
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 3.1e-130 469.2 331 71.6
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 5.4e-130 468.4 331 71.6
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 9.2e-130 467.6 323 73.7
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 1.6e-129 466.8 316 74.1
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 2.7e-129 466.1 327 71.6
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 1.0e-128 464.2 316 73.4
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 1.7e-128 463.4 331 70.7
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 1.7e-128 463.4 321 74.5
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 2.3e-128 463.0 331 70.7
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 3.8e-128 462.2 319 72.4
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 1.1e-127 460.7 326 70.9
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 1.5e-127 460.3 331 70.1
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 1.9e-127 459.9 331 70.4
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 1.9e-127 459.9 324 73.1
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 3.3e-127 459.1 332 70.2
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 5.6e-127 458.4 340 70.0
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 9.5e-127 457.6 319 72.4
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 3.6e-126 455.7 337 69.7
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 2.3e-125 453.0 345 70.1
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 8.9e-125 451.1 337 68.0
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 8.9e-125 451.1 334 70.4
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 1.2e-124 450.7 339 69.3
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 4.4e-124 448.7 318 70.8
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 7.5e-124 448.0 339 68.7
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 1.7e-123 446.8 336 68.8
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 2.2e-123 446.4 360 64.4
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 4.9e-123 445.3 340 67.6
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 8.3e-123 444.5 319 71.2
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 1.1e-122 444.1 338 66.6
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 1.9e-122 443.4 337 68.2
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 2.4e-122 443.0 323 69.7
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 2.4e-122 443.0 336 69.6
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 3.2e-122 442.6 332 68.1
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 3.2e-122 442.6 336 68.2
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 3.2e-122 442.6 334 68.3
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 1.2e-121 440.7 341 66.6
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 1.6e-121 440.3 319 70.5
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 2.7e-121 439.5 336 69.6
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 4.6e-121 438.7 309 72.5
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 4.6e-121 438.7 331 68.3
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 7.8e-121 438.0 328 68.9
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 2.5e-119 433.0 337 68.2
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 4.3e-119 432.2 335 67.5
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 1.1e-117 427.6 336 67.3
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 2.3e-117 426.4 344 62.8
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 5.2e-117 425.2 277 75.8
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 2.0e-116 423.3 328 69.2
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 1.7e-115 420.2 327 66.1
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 8.3e-115 417.9 312 67.0
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 5.4e-114 415.2 326 65.3
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 1.7e-112 410.2 335 66.0
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 8.6e-112 407.9 320 68.8
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 1.7e-107 393.7 325 64.3
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 6.4e-107 391.7 320 64.4
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 6.4e-107 391.7 337 62.6
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 1.4e-106 390.6 277 70.8
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 9.2e-106 387.9 330 60.3
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 3.5e-105 386.0 432 51.9
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 2.8e-102 376.3 270 73.3
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 3.2e-98 362.8 321 60.1
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 2.3e-96 356.7 397 53.1
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 4.3e-95 352.4 354 54.5
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 2.0e-92 343.6 347 55.0
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 4.4e-92 342.4 325 55.7
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 9.9e-92 341.3 316 55.7
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 6.0e-89 332.0 349 54.4
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 1.2e-84 317.8 315 54.9
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 1.5e-76 290.8 230 67.4
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 2.0e-76 290.4 206 71.4
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 4.9e-67 259.2 293 50.2
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 2.5e-66 256.9 275 54.2
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 1.9e-58 230.7 351 40.7
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 8.2e-54 215.3 306 41.2
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 1.5e-47 194.5 196 53.6
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 3.3e-47 193.4 188 58.0
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 1.3e-43 181.4 166 58.4
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.8e-40 171.0 208 49.5
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 3.7e-38 163.3 123 58.5
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 8.5e-35 152.1 108 68.5
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 1.6e-20 104.8 230 35.2
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 1.3e-11 75.1 52 65.4
SEGI_13989 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 1.0e-08 65.5 78 53.8
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 1.5e-07 61.6 51 60.8
Os01g0764600 Oryza sativa ssp. japonica HOM05D007053 ORTHO05D008922 9.8e-07 58.9 85 41.2
AL2G14220 Arabidopsis lyrata HOM05D011085 ORTHO05D031413 1.7e-06 58.2 111 38.7


User provided reference genes

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