Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1880 Cannabis sativa HOM05D010396 ORTHO05D002765 1.3e-91 339.7 169 100.0
CANSAT25G1832 Cannabis sativa HOM05D010396 ORTHO05D002765 1.8e-82 309.3 167 92.8
CANSAT21G2439 Cannabis sativa HOM05D010396 ORTHO05D002765 5.3e-82 307.8 168 91.1
CANSAT54G0083 Cannabis sativa HOM05D010396 ORTHO05D000013 5.3e-82 307.8 168 91.1
CANSAT11G2236 Cannabis sativa HOM05D010396 ORTHO05D002765 1.0e-77 293.5 158 93.7
CANSAT35G0400 Cannabis sativa HOM05D010396 ORTHO05D002765 1.3e-72 276.6 154 90.3
CANSAT35G0346 Cannabis sativa HOM05D010396 ORTHO05D002765 5.0e-72 274.6 141 95.0
CANSAT01G2097 Cannabis sativa HOM05D010396 ORTHO05D002765 1.2e-70 270.0 152 89.5
CANSAT35G0692 Cannabis sativa HOM05D010396 ORTHO05D002765 1.7e-67 259.6 154 83.1
CANSAT21G1820 Cannabis sativa HOM05D010396 ORTHO05D002765 4.8e-67 258.1 129 96.9
CANSAT80G0794 Cannabis sativa HOM05D010396 ORTHO05D002765 2.4e-66 255.8 129 96.1
CANSAT25G2859 Cannabis sativa HOM05D010396 ORTHO05D002765 7.0e-66 254.2 134 91.8
CANSAT64G1249 Cannabis sativa HOM05D010396 ORTHO05D002765 3.0e-53 212.2 106 97.2
CANSAT64G2574 Cannabis sativa HOM05D010396 ORTHO05D002765 1.2e-25 120.6 108 50.9
CANSAT01G2679 Cannabis sativa HOM05D010396 ORTHO05D002765 2.0e-25 119.8 108 50.9
CANSAT25G3317 Cannabis sativa HOM05D010396 ORTHO05D002765 2.0e-25 119.8 108 50.9
CANSAT78G0529 Cannabis sativa HOM05D010396 ORTHO05D002765 1.0e-24 117.5 147 43.5
CANSAT21G0992 Cannabis sativa HOM05D010396 ORTHO05D002765 8.6e-24 114.4 147 42.9
CANSAT78G0321 Cannabis sativa HOM05D010396 ORTHO05D002765 4.3e-23 112.1 152 41.4
CANSAT01G0081 Cannabis sativa HOM05D000017 ORTHO05D000013 8.3e-19 97.8 49 98.0
DCAR_015925 Daucus carota HOM05D006864 ORTHO05D002765 1.2e-14 84.0 94 38.3
CANSAT54G1694 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-13 80.5 115 37.4
CANSAT25G1145 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-13 80.1 98 39.8
CANSAT11G2629 Cannabis sativa HOM05D000017 ORTHO05D000013 4.0e-13 79.0 115 36.5
Nitab4.5_0009921g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.0e-13 79.0 96 35.4
SGA_v2.0_scaffold1G00045 Striga asiatica HOM05D010396 ORTHO05D002765 4.0e-13 79.0 95 38.9
CANSAT21G1471 Cannabis sativa HOM05D000017 ORTHO05D000013 6.8e-13 78.2 98 38.8
CANSAT78G0171 Cannabis sativa HOM05D000017 ORTHO05D000013 1.5e-12 77.0 99 38.4
CANSAT35G1872 Cannabis sativa HOM05D000017 ORTHO05D000013 4.4e-12 75.5 98 37.8
CANSAT54G0823 Cannabis sativa HOM05D000017 ORTHO05D000013 5.8e-12 75.1 98 38.8
CANSAT56G0158 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-11 73.6 99 38.4
CANSAT56G1010 Cannabis sativa HOM05D000017 ORTHO05D000013 1.7e-11 73.6 171 28.7
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 1.7e-11 73.6 96 33.3
CANSAT78G2408 Cannabis sativa HOM05D000017 ORTHO05D000013 3.7e-11 72.4 132 28.0
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 6.4e-11 71.6 96 32.3
Nitab4.5_0001062g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-10 70.5 120 30.0
Peaxi162Scf00184g00211 Petunia axillaris HOM05D006864 ORTHO05D002765 3.2e-10 69.3 112 29.5
Nitab4.5_0000374g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.1e-10 68.2 94 37.2
Peaxi162Scf00106g02222 Petunia axillaris HOM05D006864 ORTHO05D002765 7.1e-10 68.2 150 28.0
Nitab4.5_0001591g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.2e-09 67.4 102 34.3
Peaxi162Scf00164g01221 Petunia axillaris HOM05D006864 ORTHO05D002765 1.6e-09 67.0 112 29.5
Nitab4.5_0027852g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.7e-09 66.2 102 34.3
Nitab4.5_0006009g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.0e-09 65.1 141 28.4
Nitab4.5_0011275g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 6.0e-09 65.1 102 34.3
Peaxi162Scf00006g03314 Petunia axillaris HOM05D006864 ORTHO05D002765 6.0e-09 65.1 112 28.6
SGA_v2.0_scaffold220G42613 Striga asiatica HOM05D015252 ORTHO05D002765 6.0e-09 65.1 106 33.0
Nitab4.5_0000832g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 7.8e-09 64.7 106 32.1
SGA_v2.0_scaffold10G05133 Striga asiatica HOM05D015252 ORTHO05D002765 1.0e-08 64.3 92 35.9
Nitab4.5_0004770g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.3e-08 63.9 102 33.3
Nitab4.5_0000584g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.0e-08 62.8 94 29.8
Oeu019782.1 Olea europaea HOM05D012404 ORTHO05D002765 5.1e-08 62.0 152 24.3
Nitab4.5_0003767g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 8.6e-08 61.2 94 28.7
Nitab4.5_0003966g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 8.6e-08 61.2 100 32.0
Peaxi162Scf01226g00018 Petunia axillaris HOM05D006864 ORTHO05D000013 8.6e-08 61.2 92 28.3
Nitab4.5_0001614g0160 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.5e-07 60.5 102 33.3
Nitab4.5_0007069g0020 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.5e-07 60.5 102 32.4
CANSAT01G2588 Cannabis sativa HOM05D000017 ORTHO05D000013 1.9e-07 60.1 76 46.1
CANSAT01G1220 Cannabis sativa HOM05D000017 ORTHO05D000013 2.5e-07 59.7 32 93.8
Nitab4.5_0013596g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.5e-07 59.7 94 27.7
Nitab4.5_0000890g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.3e-07 59.3 94 30.9
Nitab4.5_0012915g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.3e-07 59.3 100 32.0
Nitab4.5_0002430g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.3e-07 58.9 94 33.0
Solyc09g150133.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 4.3e-07 58.9 95 26.3
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.6e-07 58.5 94 28.7
Nitab4.5_0001173g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.3e-07 58.2 94 27.7
Nitab4.5_0003887g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.5e-07 57.8 94 27.7
Nitab4.5_0004917g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 9.5e-07 57.8 94 25.5
Solyc10g047821.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 9.5e-07 57.8 95 26.3
SGA_v2.0_scaffold17G08056 Striga asiatica HOM05D010396 ORTHO05D002765 9.5e-07 57.8 136 30.9
Nitab4.5_0000036g0400 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-06 57.4 94 27.7
Nitab4.5_0000423g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.2e-06 57.4 94 27.7
Oeu009493.1 Olea europaea HOM05D012404 ORTHO05D002765 1.2e-06 57.4 152 23.7
Sopen05g022560 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-06 57.4 118 24.6
CANSAT78G1392 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-06 57.0 46 50.0
Nitab4.5_0002279g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-06 57.0 94 26.6
Sopen01g037270 Solanum pennellii HOM05D000017 ORTHO05D000013 2.1e-06 56.6 97 25.8
Sopen11g029160 Solanum pennellii HOM05D000017 ORTHO05D000013 2.1e-06 56.6 97 25.8
Nitab4.5_0000814g0120 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.8e-06 56.2 97 27.8
Nitab4.5_0000034g0050 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.6e-06 55.8 97 30.9
SGA_v2.0_scaffold106G30719 Striga asiatica HOM05D015252 ORTHO05D002765 3.6e-06 55.8 87 28.7
Nitab4.5_0001863g0150 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.7e-06 55.5 92 26.1
CANSAT54G1361 Cannabis sativa HOM05D000017 ORTHO05D000013 6.2e-06 55.1 51 43.1
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.2e-06 55.1 94 27.7
CANSAT25G1873 Cannabis sativa HOM05D000017 ORTHO05D000013 8.1e-06 54.7 110 29.1
CANSAT25G3326 Cannabis sativa HOM05D000017 ORTHO05D002765 8.1e-06 54.7 42 52.4
CANSAT54G1301 Cannabis sativa HOM05D012404 ORTHO05D002765 8.1e-06 54.7 110 29.1
CANSAT64G1942 Cannabis sativa HOM05D000017 ORTHO05D000013 8.1e-06 54.7 110 29.1
SGA_v2.0_scaffold122G33338 Striga asiatica HOM05D000196 ORTHO05D010161 8.1e-06 54.7 60 38.3


User provided reference genes

Program Settings