Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 8.8e-199 696.8 367 100.0
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 3.0e-98 362.8 301 70.8
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 6.7e-98 361.7 288 70.8
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 1.1e-97 360.9 291 67.4
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 9.7e-97 357.8 300 70.7
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 4.1e-95 352.4 289 69.6
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 9.1e-95 351.3 284 67.3
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 1.5e-94 350.5 309 64.1
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 1.5e-94 350.5 287 68.6
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 2.2e-93 346.7 293 64.8
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 2.2e-93 346.7 292 68.5
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 5.0e-93 345.5 292 64.7
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 2.5e-92 343.2 298 63.8
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 2.5e-92 343.2 299 64.2
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 5.5e-92 342.0 284 66.5
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 5.5e-92 342.0 298 64.8
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 1.2e-91 340.9 287 64.8
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 1.6e-91 340.5 288 65.3
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 1.6e-91 340.5 287 64.5
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 2.7e-91 339.7 288 69.1
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 6.1e-91 338.6 285 64.6
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 7.9e-91 338.2 291 68.7
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 1.0e-90 337.8 284 66.2
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 1.0e-90 337.8 285 64.2
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 1.4e-90 337.4 287 65.2
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 2.3e-90 336.7 288 69.4
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 3.0e-90 336.3 294 61.6
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 3.9e-90 335.9 284 64.4
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 6.7e-90 335.1 285 64.2
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 8.8e-90 334.7 286 66.1
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 1.1e-89 334.3 298 63.8
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 3.3e-89 332.8 290 68.3
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 4.8e-88 328.9 289 65.1
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 8.2e-88 328.2 309 62.5
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 3.1e-87 326.2 290 61.0
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 4.1e-87 325.9 287 62.4
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 4.1e-87 325.9 295 62.4
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 7.0e-87 325.1 195 82.1
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 9.1e-87 324.7 291 61.9
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 1.6e-86 323.9 287 61.3
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 3.5e-86 322.8 296 65.5
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 2.2e-85 320.1 286 64.0
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 5.0e-85 318.9 291 64.9
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 1.5e-84 317.4 239 71.5
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 1.9e-84 317.0 284 63.4
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 1.9e-84 317.0 286 62.2
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 2.5e-84 316.6 290 66.9
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 2.5e-84 316.6 287 60.6
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 3.2e-84 316.2 285 61.4
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 3.2e-84 316.2 201 78.1
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 4.2e-84 315.8 283 61.5
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 5.5e-84 315.5 286 61.2
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 5.5e-84 315.5 292 65.1
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 7.2e-84 315.1 291 61.2
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 9.4e-84 314.7 285 61.4
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 1.2e-83 314.3 287 64.8
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 1.4e-82 310.8 287 61.0
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 1.8e-82 310.5 310 60.0
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 2.3e-82 310.1 284 61.3
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 5.2e-82 308.9 285 63.2
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 5.2e-82 308.9 287 64.1
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 6.7e-82 308.5 286 63.6
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 8.8e-82 308.1 302 59.3
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 8.8e-82 308.1 201 76.1
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 1.5e-81 307.4 288 62.2
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 1.5e-81 307.4 422 47.6
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 2.6e-81 306.6 328 55.2
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 2.6e-81 306.6 199 76.9
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 3.3e-81 306.2 286 59.4
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 9.7e-81 304.7 289 59.2
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 1.7e-80 303.9 286 59.1
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 2.2e-80 303.5 287 61.7
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 2.8e-80 303.1 288 64.2
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 1.4e-79 300.8 288 64.9
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 2.0e-78 297.0 202 73.8
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 2.0e-78 297.0 294 61.2
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 1.0e-77 294.7 200 74.0
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 1.3e-77 294.3 290 56.6
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 7.2e-76 288.5 197 73.1
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 6.1e-75 285.4 314 56.7
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 1.8e-74 283.9 286 56.6
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 2.3e-74 283.5 329 54.1
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 2.3e-74 283.5 283 57.6
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 1.5e-73 280.8 302 57.9
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 5.7e-73 278.9 360 49.4
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 1.7e-72 277.3 311 53.4
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 2.2e-72 276.9 284 56.7
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 1.8e-71 273.9 200 66.5
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 1.2e-70 271.2 195 69.2
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 3.8e-69 266.2 196 67.3
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 1.8e-66 257.3 289 53.3
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 3.0e-66 256.5 156 80.1
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 4.4e-65 252.7 247 58.3
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 1.7e-64 250.8 321 51.7
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 1.9e-60 237.3 153 75.8
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 2.5e-60 236.9 245 56.7
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 9.5e-60 235.0 206 58.7
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 1.8e-55 220.7 161 70.2
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 2.8e-51 206.8 189 61.9
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.4e-50 204.5 131 78.6
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 4.4e-49 199.5 132 78.0
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 1.7e-45 187.6 213 56.8
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 4.3e-44 183.0 226 46.0
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 8.9e-42 175.3 211 49.8
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 9.2e-39 165.2 409 35.2
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 4.6e-38 162.9 97 80.4
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 6.2e-35 152.5 189 55.0
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 5.4e-31 139.4 132 56.8
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 9.0e-26 122.1 80 72.5
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 2.4e-23 114.0 96 61.5
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 2.4e-23 114.0 227 39.2
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 9.3e-23 112.1 75 74.7
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 9.9e-17 92.0 288 33.3
Gohir.A12G247950 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.4e-10 71.6 44 75.0
SalBow1G4829 Salvia bowleyana HOM05D006796 ORTHO05D000018 2.4e-10 70.9 45 75.6
PRCOL_00001264 Prasinoderma coloniale HOM05D006796 ORTHO05D008615 1.2e-09 68.6 226 27.0
Nn2g11199 Nelumbo nucifera HOM05D006796 ORTHO05D008615 7.1e-07 59.3 61 52.5
Ca_27564_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 9.3e-07 58.9 38 71.1
Ca_04476_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 2.7e-06 57.4 94 40.4
Ca_28040_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 2.7e-06 57.4 37 67.6
Ca_03868_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 3.5e-06 57.0 41 63.4


User provided reference genes

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