Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1685 Cannabis sativa HOM05D007733 ORTHO05D009786 9.0e-30 132.9 65 100.0
Gohir.A11G247101 Gossypium hirsutum HOM05D007733 ORTHO05D009786 1.6e-18 95.5 55 81.8
Oeu063785.1 Olea europaea HOM05D007733 ORTHO05D009786 2.1e-18 95.1 57 80.7
SGA_v2.0_scaffold105G30286 Striga asiatica HOM05D007733 ORTHO05D009786 2.1e-18 95.1 55 81.8
SGA_v2.0_scaffold3G01720 Striga asiatica HOM05D007733 ORTHO05D009786 2.1e-18 95.1 55 81.8
TWI74G1577 Tripterygium wilfordii HOM05D007733 ORTHO05D009786 4.6e-18 94.0 52 84.6
FAN06G4775 Fragaria x ananassa HOM05D007733 ORTHO05D009786 6.0e-18 93.6 59 76.3
FAN10G3322 Fragaria x ananassa HOM05D000072 ORTHO05D000026 6.0e-18 93.6 59 76.3
Thecc.01G129600 Theobroma cacao HOM05D007733 ORTHO05D009786 6.0e-18 93.6 56 78.6
CSS0035024 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 1.0e-17 92.8 58 75.9
PSO384G4410 Papaver somniferum HOM05D007733 ORTHO05D009786 1.8e-17 92.0 57 75.4
arahy.Tifrunner.gnm1.ann1.2TE5XM Arachis hypogaea HOM05D007733 ORTHO05D009786 2.3e-17 91.7 52 80.8
MD00G1018100 Malus domestica HOM05D007733 ORTHO05D009786 3.0e-17 91.3 51 84.3
Duzib264G0681 Durio zibethinus HOM05D007733 ORTHO05D009786 3.9e-17 90.9 56 78.6
MD12G1095600 Malus domestica HOM05D007733 ORTHO05D009786 3.9e-17 90.9 51 82.4
Migut.J01653 Erythranthe guttata HOM05D007733 ORTHO05D009786 6.7e-17 90.1 56 76.8
Potri.016G036400 Populus trichocarpa HOM05D007733 ORTHO05D009786 6.7e-17 90.1 58 74.1
Cc06_g19360 Coffea canephora HOM05D007733 ORTHO05D009786 8.7e-17 89.7 56 76.8
CsaV3_4G029620 Cucumis sativus L. HOM05D007733 ORTHO05D009786 1.5e-16 89.0 55 78.2
FAN03G1257 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.5e-16 89.0 55 76.4
Hma1.2p1_0757F.1_g213300 Hydrangea macrophylla HOM05D007733 ORTHO05D009786 1.5e-16 89.0 58 74.1
Psat4g102040 Pisum sativum HOM05D007733 ORTHO05D009786 1.5e-16 89.0 55 74.5
Prupe.7G032300 Prunus persica HOM05D007733 ORTHO05D009786 1.5e-16 89.0 60 73.3
Sed0021033 Sechium edule HOM05D007733 ORTHO05D009786 2.5e-16 88.2 56 75.0
RcHm_v2.0_Chr1g0328411 Rosa chinensis HOM05D007733 ORTHO05D009786 3.3e-16 87.8 50 82.0
Atru.chr1.1436 Acer truncatum HOM05D007733 ORTHO05D009786 4.3e-16 87.4 52 78.8
CiPaw.09G048000 Carya illinoinensis HOM05D007733 ORTHO05D009786 4.3e-16 87.4 61 70.5
PGR031G3673 Punica granatum HOM05D007733 ORTHO05D009786 4.3e-16 87.4 57 75.4
RcHm_v2.0_Chr1g0328381 Rosa chinensis HOM05D007733 ORTHO05D009786 4.3e-16 87.4 58 74.1
MELO3C019082.2 Cucumis melo HOM05D007733 ORTHO05D009786 5.7e-16 87.0 55 76.4
Manes.01G136000 Manihot esculenta HOM05D007733 ORTHO05D009786 5.7e-16 87.0 57 70.2
Aa31LG1G18010 Aethionema arabicum HOM05D007733 ORTHO05D009786 9.6e-16 86.3 56 73.2
Peaxi162Scf00696g00026 Petunia axillaris HOM05D007733 ORTHO05D009786 9.6e-16 86.3 51 78.4
CSS0016184 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 1.3e-15 85.9 58 70.7
CSS0036430 Camellia sinensis var. sinensis HOM05D007733 ORTHO05D009786 1.3e-15 85.9 58 70.7
BcaB05g21564 Brassica carinata HOM05D007733 ORTHO05D009786 1.6e-15 85.5 51 76.5
BcaC03g13244 Brassica carinata HOM05D007733 ORTHO05D009786 1.6e-15 85.5 51 76.5
C02p03760 Brassica napus HOM05D007733 ORTHO05D009786 1.6e-15 85.5 51 76.5
BolC2t06337H Brassica oleracea HOM05D007733 ORTHO05D009786 1.6e-15 85.5 51 76.5
BraA02t04971Z Brassica rapa HOM05D007733 ORTHO05D009786 1.6e-15 85.5 51 76.5
CDE04G2892 Ceratophyllum demersum HOM05D007733 ORTHO05D009786 1.6e-15 85.5 58 69.0
Potri.006G039100 Populus trichocarpa HOM05D007733 ORTHO05D009786 2.1e-15 85.1 51 74.5
GSVIVG01004069001 Vitis vinifera HOM05D007733 ORTHO05D009786 2.1e-15 85.1 51 76.5
Thhalv10015230m.g Eutrema salsugineum HOM05D007733 ORTHO05D009786 2.8e-15 84.7 52 75.0
Medtr1g069390 Medicago truncatula HOM05D007733 ORTHO05D009786 3.7e-15 84.3 52 73.1
Lalb_Chr06g0173691 Lupinus albus HOM05D007733 ORTHO05D009786 4.8e-15 84.0 57 71.9
Phvul.005G122800 Phaseolus vulgaris HOM05D007733 ORTHO05D009786 4.8e-15 84.0 51 74.5
RcHm_v2.0_Chr1g0328511 Rosa chinensis HOM05D007733 ORTHO05D009786 4.8e-15 84.0 58 69.0
Sp6g34080 Schrenkiella parvula HOM05D007733 ORTHO05D009786 4.8e-15 84.0 51 74.5
CAN.G960.60 Capsicum annuum HOM05D007733 ORTHO05D009786 6.3e-15 83.6 57 68.4
PGSC0003DMG401008361 Solanum tuberosum HOM05D007733 ORTHO05D009786 6.3e-15 83.6 57 68.4
Os11g0136701 Oryza sativa ssp. japonica HOM05D007733 ORTHO05D009786 8.2e-15 83.2 60 70.0
Aqoxy1G00180 Aquilegia oxysepala HOM05D007733 ORTHO05D009786 1.1e-14 82.8 50 76.0
AT5G09225 Arabidopsis thaliana HOM05D007733 ORTHO05D009786 1.4e-14 82.4 52 73.1
THA.LOC104819346 Tarenaya hassleriana HOM05D007733 ORTHO05D009786 1.4e-14 82.4 51 72.5
Solyc10g078420.2 Solanum lycopersicum HOM05D007733 ORTHO05D009786 2.4e-14 81.6 57 66.7
Carub.0006s0778 Capsella rubella HOM05D007733 ORTHO05D009786 3.1e-14 81.3 52 71.2
AL6G19610 Arabidopsis lyrata HOM05D007733 ORTHO05D009786 4.1e-14 80.9 51 72.5
CARHR204200 Cardamine hirsuta HOM05D007733 ORTHO05D009786 4.1e-14 80.9 51 72.5
Glyma.12G186000 Glycine max HOM05D007733 ORTHO05D009786 4.1e-14 80.9 57 66.7
Thhalv10005241m.g Eutrema salsugineum HOM05D007733 ORTHO05D009786 5.3e-14 80.5 56 66.1
Glyma.13G315500 Glycine max HOM05D007733 ORTHO05D009786 5.3e-14 80.5 57 66.7
Gohir.D11G257301 Gossypium hirsutum HOM05D007733 ORTHO05D009786 5.3e-14 80.5 41 87.8
Gorai.007G275700 Gossypium raimondii HOM05D007733 ORTHO05D009786 5.3e-14 80.5 41 87.8
FAN01G2779 Fragaria x ananassa HOM05D000072 ORTHO05D000026 6.9e-14 80.1 41 85.4
COL.COLO4_35702 Corchorus olitorius HOM05D007733 ORTHO05D009786 9.0e-14 79.7 41 85.4
Os12g0133600 Oryza sativa ssp. japonica HOM05D007733 ORTHO05D009786 9.0e-14 79.7 60 66.7
BraA06t25997Z Brassica rapa HOM05D007733 ORTHO05D009786 1.5e-13 79.0 44 77.3
Oeu022972.2 Olea europaea HOM05D007733 ORTHO05D009786 1.5e-13 79.0 41 85.4
Sc19g0008160 Simmondsia chinensis HOM05D007733 ORTHO05D009786 1.5e-13 79.0 41 82.9
HanXRQChr01g0008231 Helianthus annuus HOM05D007733 ORTHO05D009786 5.9e-13 77.0 42 78.6
vmacro07790 Vaccinium macrocarpon HOM05D007733 ORTHO05D009786 5.9e-13 77.0 41 80.5
arahy.Tifrunner.gnm1.ann1.05QC9F Arachis hypogaea HOM05D007733 ORTHO05D009786 7.6e-13 76.6 43 79.1
MBI19_g20791_MAGBIO Magnolia biondii HOM05D007733 ORTHO05D009786 1.0e-12 76.3 45 77.8
BcaC01g02637 Brassica carinata HOM05D007733 ORTHO05D009786 1.3e-12 75.9 43 74.4
A06p30480 Brassica napus HOM05D007733 ORTHO05D009786 1.7e-12 75.5 44 75.0
BcaB02g09770 Brassica carinata HOM05D007733 ORTHO05D009786 2.2e-12 75.1 52 63.5
Manes.02G094502 Manihot esculenta HOM05D007733 ORTHO05D009786 2.2e-12 75.1 41 82.9
Nitab4.5_0000812g0080 Nicotiana tabacum HOM05D007733 ORTHO05D009786 2.9e-12 74.7 41 80.5
Nitab4.5_0004588g0050 Nicotiana tabacum HOM05D007733 ORTHO05D009786 5.0e-12 73.9 42 76.2
Peaxi162Scf00848g00014 Petunia axillaris HOM05D007733 ORTHO05D009786 5.0e-12 73.9 41 78.0
SalBow7G0067 Salvia bowleyana HOM05D007733 ORTHO05D009786 5.0e-12 73.9 45 77.8
Hund24585 Selenicereus undatus HOM05D007733 ORTHO05D009786 5.0e-12 73.9 42 76.2
HPP92_015863 Vanilla planifolia HOM05D007733 ORTHO05D009786 8.4e-12 73.2 40 80.0
HPP92_015865 Vanilla planifolia HOM05D007733 ORTHO05D009786 8.4e-12 73.2 40 80.0
Lsat_1_v5_gn_5_157040 Lactuca sativa HOM05D007733 ORTHO05D009786 1.9e-11 72.0 50 70.0
Zm00001eb093420 Zea mays HOM05D007733 ORTHO05D009786 3.2e-11 71.2 48 64.6
Peaxi162Scf00696g00024 Petunia axillaris HOM05D007733 ORTHO05D009786 9.3e-11 69.7 39 79.5
RcHm_v2.0_Chr1g0328311 Rosa chinensis HOM05D007733 ORTHO05D009786 7.4e-08 60.1 42 69.0
DCAR_027120 Daucus carota HOM05D000958 ORTHO05D000786 2.8e-07 58.2 34 76.5
Mapoly0009s0018 Marchantia polymorpha HOM05D007733 ORTHO05D009786 6.3e-07 57.0 55 49.1
Gohir.A11G247151 Gossypium hirsutum HOM05D007733 ORTHO05D009786 8.2e-07 56.6 36 80.6
CBR_g21252 Chara braunii HOM05D007733 ORTHO05D009786 1.1e-06 56.2 57 47.4


User provided reference genes

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