Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1677 Cannabis sativa HOM05D007306 ORTHO05D009112 7.9e-71 270.4 142 100.0
Thecc.05G171400 Theobroma cacao HOM05D007306 ORTHO05D009112 2.2e-36 156.0 150 62.7
Prupe.7G077000 Prunus persica HOM05D007306 ORTHO05D009112 2.9e-33 145.6 145 62.1
RcHm_v2.0_Chr3g0479681 Rosa chinensis HOM05D007306 ORTHO05D009112 2.9e-33 145.6 140 64.3
Potri.006G192500 Populus trichocarpa HOM05D007306 ORTHO05D009112 5.0e-33 144.8 149 58.4
MD12G1057100 Malus domestica HOM05D007306 ORTHO05D009112 8.5e-33 144.1 144 62.5
QL07p023738 Quercus lobata HOM05D007306 ORTHO05D009112 1.1e-32 143.7 147 60.5
Dinv14300 Davidia involucrata HOM05D007306 ORTHO05D009112 1.9e-32 142.9 146 57.5
FvH4_6g22320 Fragaria vesca HOM05D007306 ORTHO05D009112 2.5e-32 142.5 140 63.6
FAN05G3567 Fragaria x ananassa HOM05D007306 ORTHO05D009112 2.5e-32 142.5 140 63.6
FAN14G0362 Fragaria x ananassa HOM05D007306 ORTHO05D009112 3.2e-32 142.1 140 62.9
TWI74G1393 Tripterygium wilfordii HOM05D007306 ORTHO05D009112 5.5e-32 141.4 135 65.2
Hma1.2p1_0386F.1_g141880 Hydrangea macrophylla HOM05D007306 ORTHO05D009112 1.2e-31 140.2 147 57.1
FAN02G3291 Fragaria x ananassa HOM05D007306 ORTHO05D009112 2.1e-31 139.4 140 62.9
FAN09G2453 Fragaria x ananassa HOM05D007306 ORTHO05D009112 2.1e-31 139.4 140 62.1
Aqoxy1G00127 Aquilegia oxysepala HOM05D007306 ORTHO05D009112 4.7e-31 138.3 145 58.6
CiPaw.09G030300 Carya illinoinensis HOM05D007306 ORTHO05D009112 4.7e-31 138.3 147 63.3
MD14G1057700 Malus domestica HOM05D007306 ORTHO05D009112 6.1e-31 137.9 142 62.7
Gohir.A01G191300 Gossypium hirsutum HOM05D007306 ORTHO05D009112 1.0e-30 137.1 149 59.1
Gorai.002G224300 Gossypium raimondii HOM05D007306 ORTHO05D009112 1.0e-30 137.1 149 59.1
Gohir.D01G178600 Gossypium hirsutum HOM05D007306 ORTHO05D009112 2.3e-30 136.0 149 59.7
Ciclev10013031m.g Citrus clementina HOM05D007306 ORTHO05D009112 5.2e-30 134.8 151 57.6
Duzib093G0428 Durio zibethinus HOM05D007306 ORTHO05D009112 5.2e-30 134.8 146 56.2
Cfa020165 Carpinus fangiana HOM05D007306 ORTHO05D009112 6.7e-30 134.4 150 60.0
COL.COLO4_33982 Corchorus olitorius HOM05D007306 ORTHO05D009112 1.2e-29 133.7 150 58.0
Nn2g15686 Nelumbo nucifera HOM05D007306 ORTHO05D009112 1.2e-29 133.7 137 59.1
PGR004G2053 Punica granatum HOM05D007306 ORTHO05D009112 2.6e-29 132.5 150 56.7
Potri.016G045700 Populus trichocarpa HOM05D007306 ORTHO05D009112 3.3e-29 132.1 150 55.3
Atru.chr8.1112 Acer truncatum HOM05D007306 ORTHO05D009112 9.7e-29 130.6 142 57.0
TAR623G0307 Trochodendron aralioides HOM05D007306 ORTHO05D009112 8.2e-28 127.5 143 56.6
Cpa.g.sc85.66 Carica papaya HOM05D007306 ORTHO05D009112 1.4e-27 126.7 141 59.6
Lalb_Chr18g0047871 Lupinus albus HOM05D007306 ORTHO05D009112 1.4e-27 126.7 141 59.6
arahy.Tifrunner.gnm1.ann1.I9AM74 Arachis hypogaea HOM05D007306 ORTHO05D009112 3.1e-27 125.6 139 54.7
CiPaw.10G026400 Carya illinoinensis HOM05D007306 ORTHO05D009112 4.1e-27 125.2 148 58.1
Lj1g0014955 Lotus japonicus HOM05D007306 ORTHO05D009112 2.0e-26 122.9 140 54.3
arahy.Tifrunner.gnm1.ann1.T0JWFY Arachis hypogaea HOM05D007306 ORTHO05D009112 2.7e-26 122.5 139 54.7
Peaxi162Scf00258g00720 Petunia axillaris HOM05D007306 ORTHO05D009112 3.5e-26 122.1 137 51.8
Actinidia32393 Actinidia chinensis HOM05D007306 ORTHO05D009112 7.7e-26 120.9 143 53.1
Nitab4.5_0001137g0060 Nicotiana tabacum HOM05D007306 ORTHO05D009112 1.0e-25 120.6 139 52.5
Psat3g068560 Pisum sativum HOM05D007306 ORTHO05D009112 2.2e-25 119.4 139 57.6
Glyma.03G144700 Glycine max HOM05D007306 ORTHO05D009112 2.9e-25 119.0 141 55.3
Phvul.007G259800 Phaseolus vulgaris HOM05D007306 ORTHO05D009112 6.5e-25 117.9 136 52.2
vmacro07907 Vaccinium macrocarpon HOM05D007306 ORTHO05D009112 6.5e-25 117.9 142 52.1
TPR.G22157 Trifolium pratense HOM05D007306 ORTHO05D009112 8.5e-25 117.5 144 58.3
Nitab4.5_0007619g0010 Nicotiana tabacum HOM05D007306 ORTHO05D009112 1.5e-24 116.7 135 51.1
SalBow6G0438 Salvia bowleyana HOM05D007306 ORTHO05D009112 2.5e-24 115.9 139 49.6
SalBow6G2293 Salvia bowleyana HOM05D007306 ORTHO05D009112 2.5e-24 115.9 139 49.6
Actinidia22036 Actinidia chinensis HOM05D007306 ORTHO05D009112 3.2e-24 115.5 142 51.4
Migut.J01836 Erythranthe guttata HOM05D007306 ORTHO05D009112 5.5e-24 114.8 144 48.6
MSTRG.19909 Avicennia marina HOM05D007306 ORTHO05D009112 1.2e-23 113.6 142 48.6
Solyc03g120950.3 Solanum lycopersicum HOM05D007306 ORTHO05D009112 2.7e-23 112.5 136 48.5
CARHR137170 Cardamine hirsuta HOM05D007306 ORTHO05D009112 3.6e-23 112.1 141 51.1
Cc06_g15870 Coffea canephora HOM05D007306 ORTHO05D009112 4.7e-23 111.7 153 48.4
Sed0004413 Sechium edule HOM05D007306 ORTHO05D009112 4.7e-23 111.7 145 51.7
Sopen03g039780 Solanum pennellii HOM05D007306 ORTHO05D009112 6.1e-23 111.3 133 48.9
AT2G42110 Arabidopsis thaliana HOM05D007306 ORTHO05D009112 1.0e-22 110.5 137 51.1
Aa31LG1G24110 Aethionema arabicum HOM05D007306 ORTHO05D009112 1.8e-22 109.8 143 51.0
Phvul.001G142300 Phaseolus vulgaris HOM05D007306 ORTHO05D009112 2.3e-22 109.4 139 54.0
Rhsim03G0005900 Rhododendron simsii HOM05D007306 ORTHO05D009112 2.3e-22 109.4 140 49.3
PGSC0003DMG400002614 Solanum tuberosum HOM05D007306 ORTHO05D009112 4.0e-22 108.6 136 48.5
Manes.08G044500 Manihot esculenta HOM05D007306 ORTHO05D009112 5.2e-22 108.2 145 49.7
Sp4g24320 Schrenkiella parvula HOM05D007306 ORTHO05D009112 5.2e-22 108.2 142 47.2
AL4G40480 Arabidopsis lyrata HOM05D007306 ORTHO05D009112 6.8e-22 107.8 138 52.2
PSO339G5155 Papaver somniferum HOM05D007306 ORTHO05D009112 6.8e-22 107.8 136 47.1
VMungo1383G3094 Vigna mungo HOM05D007306 ORTHO05D009112 6.8e-22 107.8 141 56.7
PSO384G4645 Papaver somniferum HOM05D007306 ORTHO05D009112 8.8e-22 107.5 136 47.1
Duzib106G0602 Durio zibethinus HOM05D007306 ORTHO05D009112 1.2e-21 107.1 148 47.3
VMungo0720G2523 Vigna mungo HOM05D007306 ORTHO05D009112 1.2e-21 107.1 143 49.0
A05p02730 Brassica napus HOM05D007306 ORTHO05D009112 2.6e-21 105.9 143 50.3
BraA05t19265Z Brassica rapa HOM05D007306 ORTHO05D009112 2.6e-21 105.9 143 50.3
HanXRQChr13g0390881 Helianthus annuus HOM05D007306 ORTHO05D009112 3.4e-21 105.5 146 48.6
Sabra16G0049700 Salix brachista HOM05D007306 ORTHO05D009112 3.4e-21 105.5 105 58.1
Hund24792 Selenicereus undatus HOM05D007306 ORTHO05D009112 4.4e-21 105.1 155 45.2
C04p03260 Brassica napus HOM05D007306 ORTHO05D009112 5.7e-21 104.8 141 48.2
CAN.G1143.4 Capsicum annuum HOM05D007306 ORTHO05D009112 9.8e-21 104.0 139 49.6
ClCG10G017530 Citrullus lanatus HOM05D007306 ORTHO05D009112 9.8e-21 104.0 144 49.3
BcaC02g12458 Brassica carinata HOM05D007306 ORTHO05D009112 1.7e-20 103.2 141 47.5
BcaC02g12459 Brassica carinata HOM05D007306 ORTHO05D009112 1.7e-20 103.2 141 47.5
BolC4t21964H Brassica oleracea HOM05D007306 ORTHO05D009112 1.7e-20 103.2 141 47.5
CsaV3_3G038820 Cucumis sativus L. HOM05D007306 ORTHO05D009112 3.7e-20 102.1 144 48.6
Manes.09G035400 Manihot esculenta HOM05D007306 ORTHO05D009112 3.7e-20 102.1 136 52.9
Medtr7g093220 Medicago truncatula HOM05D007306 ORTHO05D009112 4.8e-20 101.7 139 52.5
BcaNung04408 Brassica carinata HOM05D007306 ORTHO05D009112 1.8e-19 99.8 138 47.8
MELO3C009626.2 Cucumis melo HOM05D007306 ORTHO05D009112 1.8e-19 99.8 144 47.9
Glyma.09G111500 Glycine max HOM05D007306 ORTHO05D009112 9.1e-19 97.4 145 46.2
Lsat_1_v5_gn_5_163480 Lactuca sativa HOM05D007306 ORTHO05D009112 1.2e-18 97.1 136 47.8
SGA_v2.0_scaffold69G23062 Striga asiatica HOM05D007306 ORTHO05D009112 1.2e-18 97.1 144 43.1
MBI06_g29488_MAGBIO Magnolia biondii HOM05D007306 ORTHO05D009112 2.0e-18 96.3 132 48.5
Oeu063786.1 Olea europaea HOM05D007306 ORTHO05D009112 2.7e-18 95.9 131 46.6
Thhalv10017403m.g Eutrema salsugineum HOM05D007306 ORTHO05D009112 3.5e-18 95.5 147 46.3
Carub.0004s2445 Capsella rubella HOM05D007306 ORTHO05D009112 7.7e-18 94.4 142 45.8
DCAR_017009 Daucus carota HOM05D004472 ORTHO05D007169 7.7e-18 94.4 159 43.4
Glyma.19G147700 Glycine max HOM05D007306 ORTHO05D009112 8.6e-17 90.9 134 48.5
GSVIVG01033497001 Vitis vinifera HOM05D007306 ORTHO05D009112 7.2e-16 87.8 141 41.8
ECA248G3448 Erigeron canadensis HOM05D007306 ORTHO05D009112 8.9e-14 80.9 144 38.9
AUR62012035 Chenopodium quinoa HOM05D007306 ORTHO05D009112 1.5e-13 80.1 145 41.4
AUR62015369 Chenopodium quinoa HOM05D007306 ORTHO05D009112 7.5e-13 77.8 156 41.7
THA.LOC104802563 Tarenaya hassleriana HOM05D007306 ORTHO05D009112 8.3e-12 74.3 137 42.3
Ca_08521_v3 Cicer arietinum L. HOM05D007306 ORTHO05D009112 4.1e-11 72.0 115 50.4
Ah.04g152480 Amaranthus hybridus HOM05D007306 ORTHO05D009112 1.6e-10 70.1 162 37.7
Sed0003989 Sechium edule HOM05D007306 ORTHO05D009112 1.0e-09 67.4 66 51.5
Sc19g0007100 Simmondsia chinensis HOM05D007306 ORTHO05D009112 1.3e-09 67.0 109 45.0
EL10Ac3g06917 Beta vulgaris HOM05D007306 ORTHO05D009112 8.6e-09 64.3 165 32.1
unitig_22.g6026 Utricularia gibba HOM05D007306 ORTHO05D009112 1.1e-08 63.9 137 31.4
CSS0009036 Camellia sinensis var. sinensis HOM05D007306 ORTHO05D009112 1.5e-08 63.5 94 39.4
Os03g0128300 Oryza sativa ssp. japonica HOM05D007306 ORTHO05D009112 7.3e-08 61.2 154 36.4
CDE02G0820 Ceratophyllum demersum HOM05D007306 ORTHO05D009112 1.6e-07 60.1 141 36.2
Haze_19991 Corylus avellana HOM05D000267 ORTHO05D000298 8.0e-07 57.8 31 77.4


User provided reference genes

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