Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1644 Cannabis sativa HOM05D008058 ORTHO05D010564 4.1e-138 494.6 229 100.0
CANSAT25G3402 Cannabis sativa HOM05D008058 ORTHO05D010564 4.2e-122 441.4 214 93.9
CANSAT56G3729 Cannabis sativa HOM05D008058 ORTHO05D010564 2.4e-117 425.6 215 90.7
CANSAT21G1969 Cannabis sativa HOM05D008058 ORTHO05D010564 2.6e-100 369.0 183 91.3
CANSAT56G1475 Cannabis sativa HOM05D008058 ORTHO05D010564 1.2e-97 360.1 183 88.5
CANSAT64G1886 Cannabis sativa HOM05D008058 ORTHO05D010564 2.7e-97 359.0 185 89.2
CANSAT78G1148 Cannabis sativa HOM05D008058 ORTHO05D010564 1.9e-90 336.3 177 88.1
CANSAT64G2290 Cannabis sativa HOM05D008058 ORTHO05D010564 1.1e-69 267.3 227 51.5
CANSAT56G1868 Cannabis sativa HOM05D008058 ORTHO05D010564 3.5e-68 262.3 226 50.4
CANSAT56G1907 Cannabis sativa HOM05D008058 ORTHO05D010564 2.6e-63 246.1 226 46.9
CANSAT21G2086 Cannabis sativa HOM05D008058 ORTHO05D010564 1.8e-53 213.4 223 43.5
CANSAT64G0678 Cannabis sativa HOM05D008058 ORTHO05D010564 7.8e-44 181.4 222 37.4
CANSAT64G2472 Cannabis sativa HOM05D008058 ORTHO05D010564 9.5e-42 174.5 200 38.5
CANSAT25G2931 Cannabis sativa HOM05D008058 ORTHO05D010564 3.6e-41 172.6 179 43.6
CANSAT01G1756 Cannabis sativa HOM05D008058 ORTHO05D010564 8.9e-40 167.9 222 35.6
CANSAT64G2972 Cannabis sativa HOM05D008058 ORTHO05D010564 8.9e-40 167.9 179 41.3
CANSAT21G1560 Cannabis sativa HOM05D008058 ORTHO05D010564 2.2e-38 163.3 212 36.3
CANSAT56G2017 Cannabis sativa HOM05D008058 ORTHO05D010564 3.7e-38 162.5 199 37.7
CANSAT80G0349 Cannabis sativa HOM05D008058 ORTHO05D010564 1.2e-36 157.5 226 35.4
CANSAT01G1382 Cannabis sativa HOM05D008058 ORTHO05D010564 6.0e-36 155.2 139 49.6
CANSAT56G1076 Cannabis sativa HOM05D008058 ORTHO05D010564 2.1e-33 146.7 123 52.8
CANSAT54G2324 Cannabis sativa HOM05D008058 ORTHO05D010564 3.6e-33 146.0 140 43.6
CANSAT56G3134 Cannabis sativa HOM05D008058 ORTHO05D010564 1.1e-32 144.4 220 34.1
CANSAT25G3676 Cannabis sativa HOM05D008058 ORTHO05D010564 1.2e-31 141.0 172 38.4
CANSAT25G0360 Cannabis sativa HOM05D008058 ORTHO05D010564 1.6e-28 130.6 147 41.5
CANSAT01G2125 Cannabis sativa HOM05D008058 ORTHO05D010564 3.5e-28 129.4 100 59.0
CANSAT80G0885 Cannabis sativa HOM05D008058 ORTHO05D010564 2.3e-27 126.7 142 40.8
CANSAT21G1495 Cannabis sativa HOM05D008058 ORTHO05D010564 1.6e-25 120.6 142 40.8
CANSAT21G1982 Cannabis sativa HOM05D008058 ORTHO05D010564 2.1e-25 120.2 132 41.7
CANSAT56G2831 Cannabis sativa HOM05D008058 ORTHO05D010564 3.1e-24 116.3 127 40.9
CANSAT35G1653 Cannabis sativa HOM05D008058 ORTHO05D010564 4.0e-24 115.9 138 41.3
CANSAT56G0610 Cannabis sativa HOM05D008058 ORTHO05D010564 8.9e-24 114.8 115 42.6
CANSAT11G0773 Cannabis sativa HOM05D008058 ORTHO05D010564 1.5e-23 114.0 127 40.2
CANSAT64G0708 Cannabis sativa HOM05D008058 ORTHO05D010564 3.7e-22 109.4 139 32.4
CANSAT54G1962 Cannabis sativa HOM05D009344 ORTHO05D001269 6.4e-22 108.6 65 76.9
CANSAT25G0774 Cannabis sativa HOM05D008058 ORTHO05D010564 1.1e-21 107.8 177 29.4
CANSAT78G2366 Cannabis sativa HOM05D008058 ORTHO05D010564 1.2e-20 104.4 102 45.1
CANSAT56G3292 Cannabis sativa HOM05D008058 ORTHO05D010564 1.6e-20 104.0 93 43.0
CANSAT78G1561 Cannabis sativa HOM05D008058 ORTHO05D010564 7.8e-20 101.7 141 36.2
CANSAT01G0635 Cannabis sativa HOM05D008058 ORTHO05D010564 1.3e-19 100.9 102 44.1
RcHm_v2.0_Chr2g0104761 Rosa chinensis HOM05D000529 ORTHO05D000472 1.7e-19 100.5 222 26.1
CANSAT35G0551 Cannabis sativa HOM05D008058 ORTHO05D010564 5.1e-19 99.0 102 42.2
CANSAT54G1091 Cannabis sativa HOM05D008058 ORTHO05D010564 3.3e-18 96.3 133 39.1
TWI59G0262 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 5.6e-18 95.5 229 27.1
TWI75G0282 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 5.6e-18 95.5 229 27.1
CANSAT25G1105 Cannabis sativa HOM05D008058 ORTHO05D010564 1.6e-17 94.0 134 32.1
TWI38G1152 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.6e-17 94.0 229 26.6
TWI36G1743 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.4e-15 86.3 221 27.6
TWI77G0217 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.4e-15 86.3 229 26.2
TWI32G1169 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.4e-15 85.9 221 27.6
TWI38G1257 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 5.8e-15 85.5 215 27.9
CANSAT01G1620 Cannabis sativa HOM05D008058 ORTHO05D010564 7.6e-15 85.1 110 36.4
TWI53G0735 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 9.9e-15 84.7 221 27.1
TWI63G0551 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 9.9e-15 84.7 221 27.1
TWI79G1717 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.3e-14 84.3 221 27.1
TWI77G0212 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.7e-14 84.0 225 26.7
CANSAT78G0252 Cannabis sativa HOM05D008058 ORTHO05D010564 2.2e-14 83.6 91 37.4
TWI74G0229 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.2e-14 83.6 216 27.3
TWI18G1213 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.9e-14 83.2 225 25.3
TWI18G0558 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.8e-14 82.8 221 26.7
Oeu026953.1 Olea europaea HOM05D008641 ORTHO05D000397 1.1e-13 81.3 216 23.6
TWI63G1349 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.2e-12 77.8 218 26.1
TWI18G0445 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.1e-12 77.0 220 24.1
TWI77G0850 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.1e-12 77.0 220 24.1
TWI39G0946 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.6e-12 75.9 220 23.6
TWI63G1251 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.6e-12 75.9 220 24.1
Aa31LG10G8940 Aethionema arabicum HOM05D000471 ORTHO05D000199 1.3e-11 74.3 227 27.8
BolC8t47761H Brassica oleracea HOM05D000471 ORTHO05D000199 1.7e-11 73.9 200 28.5
CANSAT21G1032 Cannabis sativa HOM05D031271 ORTHO05D000397 3.9e-11 72.8 224 22.8
BraA08t33333Z Brassica rapa HOM05D000471 ORTHO05D000199 5.1e-11 72.4 200 28.0
Oeu006041.1 Olea europaea HOM05D008641 ORTHO05D000397 5.1e-11 72.4 216 21.3
BolC4t25495H Brassica oleracea HOM05D000471 ORTHO05D000199 8.7e-11 71.6 199 25.6
C05p41480 Brassica napus HOM05D000471 ORTHO05D000199 1.5e-10 70.9 230 26.5
BolC5t32887H Brassica oleracea HOM05D000471 ORTHO05D000199 1.5e-10 70.9 230 26.5
Sp7g08630 Schrenkiella parvula HOM05D000471 ORTHO05D000199 1.5e-10 70.9 222 25.2
BolC9t55313H Brassica oleracea HOM05D000471 ORTHO05D000199 1.9e-10 70.5 200 28.5
Thhalv10021955m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.5e-10 70.1 228 25.0
CANSAT56G0081 Cannabis sativa HOM05D031271 ORTHO05D000397 4.3e-10 69.3 225 23.6
Thhalv10015545m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 5.6e-10 68.9 223 23.8
Thhalv10015694m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 5.6e-10 68.9 204 26.0
Carub.0006s2832 Capsella rubella HOM05D001285 ORTHO05D000199 7.3e-10 68.6 215 25.6
Carub.0027s0004 Capsella rubella HOM05D001285 ORTHO05D000199 7.3e-10 68.6 222 24.3
Oeu034355.1 Olea europaea HOM05D008641 ORTHO05D000397 9.6e-10 68.2 136 27.9
Thhalv10029511m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.6e-09 67.4 226 23.5
ATR0204G001 Amborella trichopoda HOM05D008058 ORTHO05D010564 2.8e-09 66.6 67 37.3
SGA_v2.0_scaffold18G08386 Striga asiatica HOM05D008585 ORTHO05D000397 2.8e-09 66.6 225 24.4
CANSAT64G2753 Cannabis sativa HOM05D008058 ORTHO05D010564 3.6e-09 66.2 81 30.9
Thhalv10019812m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 3.6e-09 66.2 227 24.2
TWI81G0979 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.6e-09 66.2 217 24.4
Thhalv10003114m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 6.2e-09 65.5 226 23.0
Thhalv10023182m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 6.2e-09 65.5 226 23.0
Aa31LG7G10700 Aethionema arabicum HOM05D000471 ORTHO05D000199 8.1e-09 65.1 169 32.0
SGA_v2.0_scaffold9G04780 Striga asiatica HOM05D008585 ORTHO05D000397 8.1e-09 65.1 225 23.6
BolC2t10781H Brassica oleracea HOM05D000471 ORTHO05D000199 1.1e-08 64.7 193 27.5
Carub.0005s0342 Capsella rubella HOM05D001285 ORTHO05D000199 1.1e-08 64.7 225 25.8
Oeu026241.1 Olea europaea HOM05D008641 ORTHO05D000397 1.1e-08 64.7 169 23.7
C03p56270 Brassica napus HOM05D000471 ORTHO05D000199 1.4e-08 64.3 235 25.1
BolC7t41755H Brassica oleracea HOM05D000471 ORTHO05D000199 1.4e-08 64.3 241 24.9
Thhalv10011096m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.4e-08 64.3 208 25.5
Thhalv10023860m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.4e-08 64.3 228 26.3
TWI23G0222 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.4e-08 64.3 197 23.4
BolC2t08506H Brassica oleracea HOM05D000471 ORTHO05D000199 1.8e-08 63.9 235 25.1
Thhalv10001218m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.8e-08 63.9 240 25.0
Oeu045257.1 Olea europaea HOM05D000700 ORTHO05D000397 1.8e-08 63.9 226 23.0
AT5G45570 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 4.0e-08 62.8 222 23.4
Carub.0004s0683 Capsella rubella HOM05D001285 ORTHO05D000199 4.0e-08 62.8 157 25.5
Oeu058106.1 Olea europaea HOM05D008641 ORTHO05D000397 4.0e-08 62.8 125 29.6
C06p17570 Brassica napus HOM05D000471 ORTHO05D000199 5.3e-08 62.4 237 23.6
BolC9t57668H Brassica oleracea HOM05D000471 ORTHO05D000199 5.3e-08 62.4 233 24.5
Carub.0004s0691 Capsella rubella HOM05D001285 ORTHO05D000199 5.3e-08 62.4 222 23.4
SGA_v2.0_scaffold21G09322 Striga asiatica HOM05D008585 ORTHO05D000397 5.3e-08 62.4 228 21.9
Thhalv10015990m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 6.9e-08 62.0 214 23.4
Oeu000458.1 Olea europaea HOM05D000700 ORTHO05D000397 6.9e-08 62.0 226 21.2
Thhalv10005449m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 9.0e-08 61.6 224 22.3
Oeu019371.1 Olea europaea HOM05D000700 ORTHO05D000397 9.0e-08 61.6 231 22.9
BolC7t41823H Brassica oleracea HOM05D000471 ORTHO05D000199 1.2e-07 61.2 237 22.8
Thhalv10005672m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.2e-07 61.2 233 24.9
Oeu001907.1 Olea europaea HOM05D000700 ORTHO05D000397 1.2e-07 61.2 226 21.2
Oeu043713.1 Olea europaea HOM05D000700 ORTHO05D000397 1.2e-07 61.2 169 25.4
BolC2t10008H Brassica oleracea HOM05D000471 ORTHO05D000199 1.5e-07 60.8 239 23.0
BraA05t21209Z Brassica rapa HOM05D000471 ORTHO05D000199 1.5e-07 60.8 237 22.8
Oeu032894.1 Olea europaea HOM05D000700 ORTHO05D000397 1.5e-07 60.8 226 22.1
Oeu050189.1 Olea europaea HOM05D000700 ORTHO05D000397 1.5e-07 60.8 226 20.8
Oeu047270.2 Olea europaea HOM05D000700 ORTHO05D000397 2.0e-07 60.5 226 20.8
Carub.0003s3058 Capsella rubella HOM05D001285 ORTHO05D000199 2.6e-07 60.1 205 24.4
Oeu032337.1 Olea europaea HOM05D000700 ORTHO05D000397 2.6e-07 60.1 226 20.8
TWI14G0530 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.6e-07 60.1 129 25.6
TWI23G1286 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.6e-07 60.1 129 25.6
TWI38G0234 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.6e-07 60.1 129 25.6
TWI53G1029 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.6e-07 60.1 129 25.6
Oeu046709.1 Olea europaea HOM05D008641 ORTHO05D000397 3.4e-07 59.7 166 24.1
Sopen09g020980 Solanum pennellii HOM05D000679 ORTHO05D000137 3.4e-07 59.7 197 22.8
C03p45800 Brassica napus HOM05D000471 ORTHO05D000199 4.4e-07 59.3 220 22.7
SGA_v2.0_scaffold41G15869 Striga asiatica HOM05D011572 ORTHO05D006517 4.4e-07 59.3 213 25.4
TWI18G0298 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.4e-07 59.3 112 33.0
BolC6t37114H Brassica oleracea HOM05D000471 ORTHO05D000199 5.8e-07 58.9 234 23.1
Thhalv10002270m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 5.8e-07 58.9 214 24.8
Thhalv10019524m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 5.8e-07 58.9 240 26.7
Oeu015787.1 Olea europaea HOM05D008641 ORTHO05D000397 5.8e-07 58.9 101 33.7
Oeu055861.1 Olea europaea HOM05D000700 ORTHO05D000397 5.8e-07 58.9 216 24.1
Sopen10g028350 Solanum pennellii HOM05D000679 ORTHO05D000137 5.8e-07 58.9 213 21.1
AL6G40760 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 9.9e-07 58.2 143 27.3
CANSAT21G1517 Cannabis sativa HOM05D008058 ORTHO05D010564 9.9e-07 58.2 47 48.9
Thhalv10012223m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 9.9e-07 58.2 234 25.6
Oeu037297.1 Olea europaea HOM05D000700 ORTHO05D000397 9.9e-07 58.2 222 21.2
SGA_v2.0_scaffold22G09842 Striga asiatica HOM05D011572 ORTHO05D006517 9.9e-07 58.2 213 24.9
SGA_v2.0_scaffold61G21229 Striga asiatica HOM05D008585 ORTHO05D000397 9.9e-07 58.2 223 23.3
BolC1t02789H Brassica oleracea HOM05D000471 ORTHO05D000199 1.3e-06 57.8 237 23.2
Sopen06g029680 Solanum pennellii HOM05D000679 ORTHO05D000137 1.3e-06 57.8 193 21.8
SGA_v2.0_scaffold206G41802 Striga asiatica HOM05D011572 ORTHO05D006517 1.3e-06 57.8 213 25.4
BcaB07g33410 Brassica carinata HOM05D001285 ORTHO05D000199 1.7e-06 57.4 225 24.4
BolC9t55617H Brassica oleracea HOM05D000471 ORTHO05D000199 1.7e-06 57.4 146 26.7
Thhalv10002307m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.7e-06 57.4 142 26.8
C01p35030 Brassica napus HOM05D000471 ORTHO05D000199 2.2e-06 57.0 205 23.9
Thhalv10003101m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.2e-06 57.0 215 22.8
Oeu024098.1 Olea europaea HOM05D000700 ORTHO05D000397 2.2e-06 57.0 226 20.8
SGA_v2.0_scaffold12G06313 Striga asiatica HOM05D011572 ORTHO05D006517 2.2e-06 57.0 151 27.2
CANSAT01G2155 Cannabis sativa HOM05D008058 ORTHO05D010564 2.9e-06 56.6 55 40.0
SGA_v2.0_scaffold304G47894 Striga asiatica HOM05D008585 ORTHO05D000397 2.9e-06 56.6 217 22.1
SGA_v2.0_scaffold45G17094 Striga asiatica HOM05D011572 ORTHO05D006517 2.9e-06 56.6 218 26.1
Thhalv10029463m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 3.8e-06 56.2 228 24.6
Oeu036186.1 Olea europaea HOM05D000700 ORTHO05D000397 3.8e-06 56.2 223 21.5
AL1G58670 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 4.9e-06 55.8 224 23.7
AL4G20020 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 4.9e-06 55.8 224 23.7
A06p22860 Brassica napus HOM05D000471 ORTHO05D000199 4.9e-06 55.8 111 27.9
CANSAT01G0062 Cannabis sativa HOM05D008058 ORTHO05D001269 4.9e-06 55.8 40 55.0
MELO3C033961.2 Cucumis melo HOM05D010240 ORTHO05D011271 4.9e-06 55.8 208 21.6
Oeu034454.1 Olea europaea HOM05D000700 ORTHO05D000397 4.9e-06 55.8 228 22.8
SGA_v2.0_scaffold16G07582 Striga asiatica HOM05D008585 ORTHO05D000397 6.4e-06 55.5 213 23.9
SGA_v2.0_scaffold365G50016 Striga asiatica HOM05D011572 ORTHO05D006517 8.4e-06 55.1 213 24.4


User provided reference genes

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