Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 2.7e-250 868.2 446 100.0
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 1.2e-176 623.6 451 70.1
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 1.2e-176 623.6 451 70.1
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 9.7e-176 620.5 449 69.9
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 1.8e-174 616.3 450 70.0
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 3.6e-170 602.1 443 69.5
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 4.7e-170 601.7 446 70.0
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 6.1e-170 601.3 446 70.2
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 8.0e-170 600.9 450 68.9
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 3.7e-167 592.0 406 73.2
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 7.0e-166 587.8 447 67.3
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 3.5e-165 585.5 458 65.1
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 5.9e-165 584.7 451 65.4
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 5.9e-165 584.7 455 66.8
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 4.2e-163 578.6 429 68.1
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 1.0e-161 573.9 424 67.5
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 3.0e-161 572.4 405 71.9
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 1.2e-160 570.5 425 66.4
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 2.6e-160 569.3 416 66.8
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 6.3e-159 564.7 432 64.8
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 8.3e-159 564.3 446 67.3
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 2.4e-158 562.8 457 63.5
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 9.2e-158 560.8 402 68.4
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 1.6e-157 560.1 457 63.9
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 8.6e-156 554.3 443 64.3
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 5.6e-155 551.6 456 62.7
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 7.3e-155 551.2 442 64.0
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 2.8e-154 549.3 425 66.1
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 3.6e-154 548.9 450 64.0
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 6.1e-154 548.1 444 62.8
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 5.2e-153 545.0 406 67.0
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 1.5e-152 543.5 430 64.9
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 1.5e-152 543.5 439 63.8
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 3.4e-152 542.3 443 64.3
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 7.5e-152 541.2 444 63.7
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 1.3e-151 540.4 446 62.3
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 1.3e-151 540.4 417 65.5
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 1.9e-150 536.6 437 62.0
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 2.4e-150 536.2 424 63.2
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 3.2e-150 535.8 416 63.9
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 7.0e-150 534.6 444 62.8
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 1.2e-149 533.9 409 64.8
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 1.6e-149 533.5 452 61.9
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 2.7e-149 532.7 447 62.6
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 3.5e-149 532.3 446 62.1
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 4.6e-149 531.9 447 62.4
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 1.7e-148 530.0 409 65.5
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 2.5e-147 526.2 447 61.1
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 1.2e-146 523.9 442 61.8
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 2.8e-146 522.7 434 62.4
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 3.6e-146 522.3 436 61.2
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 3.6e-146 522.3 414 63.0
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 1.8e-145 520.0 428 60.7
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 9.8e-144 514.2 445 60.0
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 2.9e-143 512.7 407 62.7
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 8.3e-143 511.1 444 59.7
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 1.1e-142 510.8 444 59.9
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 1.1e-142 510.8 427 62.1
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 1.4e-142 510.4 449 60.1
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 9.2e-142 507.7 448 60.7
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 2.1e-141 506.5 398 64.3
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 6.0e-141 505.0 442 59.7
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 7.8e-141 504.6 442 59.5
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 1.7e-140 503.4 448 58.9
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 2.3e-140 503.1 448 59.2
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 6.6e-140 501.5 375 65.1
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 8.6e-140 501.1 449 59.9
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 1.9e-139 500.0 428 61.4
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 2.5e-139 499.6 476 56.7
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 3.3e-139 499.2 380 66.3
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 7.3e-139 498.0 451 58.5
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 1.6e-138 496.9 435 58.9
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 2.8e-138 496.1 376 65.4
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 1.4e-137 493.8 460 57.8
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 2.6e-136 489.6 456 57.7
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 3.4e-136 489.2 361 68.4
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 1.3e-135 487.3 411 60.3
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 1.2e-130 470.7 331 70.1
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 1.8e-129 466.8 435 57.0
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 2.9e-127 459.5 411 59.4
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 2.7e-125 453.0 331 70.1
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 2.5e-123 446.4 418 57.2
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 6.2e-122 441.8 356 61.5
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 2.0e-120 436.8 457 53.0
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 7.3e-115 418.3 404 54.2
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 1.3e-111 407.5 329 63.2
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 2.2e-111 406.8 332 61.4
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 8.4e-111 404.8 388 54.4
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 3.5e-109 399.4 295 67.1
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 3.0e-108 396.4 295 67.5
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 2.5e-107 393.3 403 51.6
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 4.3e-107 392.5 294 66.7
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 1.0e-103 381.3 566 42.9
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 9.6e-99 364.8 300 64.0
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 9.6e-99 364.8 425 47.8
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 1.1e-97 361.3 300 63.3
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 1.8e-97 360.5 387 50.6
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 2.0e-96 357.1 265 66.4
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 1.7e-95 354.0 451 44.1
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 6.1e-85 318.9 331 50.8
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 2.3e-84 317.0 428 40.9
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 8.2e-82 308.5 237 65.8
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 4.4e-51 206.5 283 42.8
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 2.8e-50 203.8 144 67.4
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 1.8e-49 201.1 163 60.7
Potri.008G115401 Populus trichocarpa HOM05D006903 ORTHO05D008655 9.8e-43 178.7 154 56.5
Glyma.01G089202 Glycine max HOM05D006903 ORTHO05D008655 1.8e-41 174.5 146 56.8
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 5.4e-41 172.9 147 61.2
HPP92_003073 Vanilla planifolia HOM05D006903 ORTHO05D008655 1.2e-40 171.8 166 53.6
GSVIVG01031030001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.2e-35 155.2 107 71.0
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 2.0e-27 127.9 108 59.3
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 5.8e-27 126.3 95 65.3
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 2.4e-25 120.9 123 55.3
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 7.1e-25 119.4 91 61.5
TAR629G0855 Trochodendron aralioides HOM05D006903 ORTHO05D008655 3.5e-24 117.1 93 63.4
GSVIVG01031031001 Vitis vinifera HOM05D006903 ORTHO05D008655 3.0e-07 60.8 50 58.0
Potri.008G115467 Populus trichocarpa HOM05D054562 ORTHO05D050511 3.3e-06 57.4 81 51.9
CSS0033674 Camellia sinensis var. sinensis HOM05D050661 ORTHO05D112259 9.6e-06 55.8 47 61.7


User provided reference genes

Program Settings